RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 OR6C65A6NJZ3 312 aa21.24■□□□□ 0.99
NPAS3-201ENST00000346562 ARHGAP11BQ3KRB8 267 aa21.24■□□□□ 0.99
NPAS3-201ENST00000346562 LINC01599Q8WXQ3 324 aa21.24■□□□□ 0.99
NPAS3-201ENST00000346562 RASD2Q96D21 266 aa21.24■□□□□ 0.99
NPAS3-201ENST00000346562 BCO1Q9HAY6 547 aa21.24■□□□□ 0.99
NPAS3-201ENST00000346562 KIR2DS1A0A191URI9 304 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 CSO75390 466 aaKnown RBP21.23■□□□□ 0.99
NPAS3-201ENST00000346562 HLA-HP01893 362 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 KIR2DS4P43632 304 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 GABRA4P48169 554 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 KIR2DS1Q14954 304 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 Q6ZPB1 254 aaPredicted RBP21.23■□□□□ 0.99
NPAS3-201ENST00000346562 OR2L13Q8N349 312 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 CLDN22Q8N7P3 220 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 HPSE2Q8WWQ2 592 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 CRYBG1Q9Y4K1 1723 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 VAMP5O95183 116 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 F2RP25116 425 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 SMN1Q16637 294 aaKnown RBP21.23■□□□□ 0.99
NPAS3-201ENST00000346562 FAM71CQ8NEG0 241 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 C3orf49Q96BT1 292 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 DCLRE1CQ96SD1 692 aaKnown RBP21.23■□□□□ 0.99
NPAS3-201ENST00000346562 SYT11Q9BT88 431 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 PFN3P60673 137 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 ZNF77Q15935 545 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 FAM71E1Q6IPT2 247 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 LGI3Q8N145 548 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 SLC35E1Q96K37 410 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 RIMS4Q9H426 269 aaPredicted RBP21.23■□□□□ 0.99
NPAS3-201ENST00000346562 NPFFR2Q9Y5X5 522 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 DOT1LQ8TEK3 1739 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 DFFBO76075 338 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 SHC1P29353 583 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 PSMB3P49720 205 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 ZNF626Q68DY1 528 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 SPRED1Q7Z699 444 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 OR5M1Q8NGP8 315 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 TRIB1Q96RU8 372 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 DEFB127Q9H1M4 99 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 CHST11Q9NPF2 352 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 C4BP0C0L5 1744 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 RAB19A4D1S5 217 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 METTL15P1P0C7V9 234 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 CNR1P21554 472 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 GNB1P62873 340 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 MPPED2Q15777 294 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 RNF170Q96K19 258 aa21.23■□□□□ 0.99
NPAS3-201ENST00000346562 SELENOFO60613 162 aa21.22■□□□□ 0.99
NPAS3-201ENST00000346562 ACHEP22303 614 aa21.22■□□□□ 0.99
NPAS3-201ENST00000346562 CSN1S1P47710 185 aa21.22■□□□□ 0.99
NPAS3-201ENST00000346562 COX20Q5RI15 118 aa21.22■□□□□ 0.99
NPAS3-201ENST00000346562 C6orf106Q9H6K1 298 aaPredicted RBP21.22■□□□□ 0.99
NPAS3-201ENST00000346562 EXOSC3Q9NQT5 275 aaKnown RBP21.22■□□□□ 0.99
NPAS3-201ENST00000346562 COA3Q9Y2R0 106 aaPredicted RBP21.22■□□□□ 0.99
NPAS3-201ENST00000346562 TIMM10BQ9Y5J6 103 aa21.22■□□□□ 0.99
NPAS3-201ENST00000346562 ZNF750Q32MQ0 723 aa21.22■□□□□ 0.99
NPAS3-201ENST00000346562 SARAFQ96BY9 339 aa21.22■□□□□ 0.99
NPAS3-201ENST00000346562 IGHV3-20A0A0C4DH32 117 aa21.22■□□□□ 0.99
NPAS3-201ENST00000346562 DUSP6Q16828 381 aa21.22■□□□□ 0.99
NPAS3-201ENST00000346562 OR52I1Q8NGK6 324 aa21.22■□□□□ 0.99
NPAS3-201ENST00000346562 SLC37A2Q8TED4 501 aa21.22■□□□□ 0.99
NPAS3-201ENST00000346562 TMEM174Q8WUU8 243 aa21.22■□□□□ 0.99
NPAS3-201ENST00000346562 SUCNR1Q9BXA5 334 aa21.22■□□□□ 0.99
NPAS3-201ENST00000346562 POLDIP2Q9Y2S7 368 aa21.22■□□□□ 0.99
NPAS3-201ENST00000346562 SHISA7A6NL88 538 aa21.22■□□□□ 0.99
NPAS3-201ENST00000346562 MYOGP15173 224 aa21.22■□□□□ 0.99
NPAS3-201ENST00000346562 METRNLQ641Q3 311 aa21.22■□□□□ 0.99
NPAS3-201ENST00000346562 OR5AS1Q8N127 324 aa21.22■□□□□ 0.99
NPAS3-201ENST00000346562 OR1N1Q8NGS0 311 aa21.22■□□□□ 0.99
NPAS3-201ENST00000346562 KCNE4Q8WWG9 221 aa21.22■□□□□ 0.99
NPAS3-201ENST00000346562 IER2Q9BTL4 223 aa21.22■□□□□ 0.99
NPAS3-201ENST00000346562 OIP5O43482 229 aa21.21■□□□□ 0.99
NPAS3-201ENST00000346562 SMAD4Q13485 552 aaKnown RBP21.21■□□□□ 0.99
NPAS3-201ENST00000346562 GLYATL3Q5SZD4 288 aa21.21■□□□□ 0.99
NPAS3-201ENST00000346562 SIRT6Q8N6T7 355 aa21.21■□□□□ 0.99
NPAS3-201ENST00000346562 RAB27BO00194 218 aa21.21■□□□□ 0.99
NPAS3-201ENST00000346562 PPIAP62937 165 aaKnown RBP21.21■□□□□ 0.99
NPAS3-201ENST00000346562 CLINT1Q14677 625 aa21.21■□□□□ 0.99
NPAS3-201ENST00000346562 TMEM41BQ5BJD5 291 aa21.21■□□□□ 0.99
NPAS3-201ENST00000346562 ZNF740Q8NDX6 193 aa21.21■□□□□ 0.99
NPAS3-201ENST00000346562 HS3ST1O14792 307 aa21.21■□□□□ 0.99
NPAS3-201ENST00000346562 CSF3P09919 207 aa21.21■□□□□ 0.99
NPAS3-201ENST00000346562 PRSS35Q8N3Z0 413 aa21.21■□□□□ 0.99
NPAS3-201ENST00000346562 OR52N1Q8NH53 320 aa21.21■□□□□ 0.99
NPAS3-201ENST00000346562 UBE2ZQ9H832 354 aaPredicted RBP21.21■□□□□ 0.99
NPAS3-201ENST00000346562 PURGQ9UJV8 347 aaKnown RBP21.21■□□□□ 0.99
NPAS3-201ENST00000346562 CTXN2P0C2S0 81 aa21.21■□□□□ 0.99
NPAS3-201ENST00000346562 GPR85P60893 370 aa21.21■□□□□ 0.99
NPAS3-201ENST00000346562 TMEM217Q8N7C4 229 aa21.21■□□□□ 0.99
NPAS3-201ENST00000346562 SLC22A12Q96S37 553 aa21.21■□□□□ 0.99
NPAS3-201ENST00000346562 GON7Q9BXV9 100 aa21.21■□□□□ 0.99
NPAS3-201ENST00000346562 SPACA1Q9HBV2 294 aa21.21■□□□□ 0.99
NPAS3-201ENST00000346562 CHRNA9Q9UGM1 479 aa21.21■□□□□ 0.99
NPAS3-201ENST00000346562 MYH1P12882 1939 aa21.21■□□□□ 0.99
NPAS3-201ENST00000346562 TAPBPO15533 448 aa21.21■□□□□ 0.99
NPAS3-201ENST00000346562 NXPH3O95157 252 aa21.21■□□□□ 0.99
NPAS3-201ENST00000346562 PPT1P50897 306 aa21.21■□□□□ 0.99
NPAS3-201ENST00000346562 GNB2P62879 340 aa21.21■□□□□ 0.99
NPAS3-201ENST00000346562 OR10X1Q8NGY0 326 aa21.21■□□□□ 0.99
NPAS3-201ENST00000346562 ADAM19Q9H013 955 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms