RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 NHLH2Q02577 135 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 CEBPEQ15744 281 aa15.17■□□□□ 0.02
PTCH1-201ENST00000331920 MBD5Q9P267 1494 aa15.16■□□□□ 0.02
PTCH1-201ENST00000331920 TGIF2LXQ8IUE1 241 aa15.16■□□□□ 0.02
PTCH1-201ENST00000331920 TMEM208Q9BTX3 173 aa15.16■□□□□ 0.02
PTCH1-201ENST00000331920 DNAJC15Q9Y5T4 150 aa15.16■□□□□ 0.02
PTCH1-201ENST00000331920 ACP2P11117 423 aa15.16■□□□□ 0.02
PTCH1-201ENST00000331920 PSMB5P28074 263 aa15.16■□□□□ 0.02
PTCH1-201ENST00000331920 PCBP3P57721 371 aaKnown RBP15.16■□□□□ 0.02
PTCH1-201ENST00000331920 CLSTN3Q9BQT9 956 aa15.16■□□□□ 0.02
PTCH1-201ENST00000331920 PLA2G12AQ9BZM1 189 aa15.16■□□□□ 0.02
PTCH1-201ENST00000331920 CSAG2Q9Y5P2 127 aa15.16■□□□□ 0.02
PTCH1-201ENST00000331920 NPY6RQ99463 290 aa15.16■□□□□ 0.02
PTCH1-201ENST00000331920 ETV1P50549 477 aa15.16■□□□□ 0.02
PTCH1-201ENST00000331920 MDC1Q14676 2089 aaKnown RBP15.16■□□□□ 0.02
PTCH1-201ENST00000331920 IQGAP1P46940 1657 aa15.16■□□□□ 0.02
PTCH1-201ENST00000331920 ZNF320A2RRD8 509 aa15.16■□□□□ 0.02
PTCH1-201ENST00000331920 M0R1B8 84 aa15.16■□□□□ 0.02
PTCH1-201ENST00000331920 DNPH1O43598 174 aa15.16■□□□□ 0.02
PTCH1-201ENST00000331920 NME1P15531 152 aaKnown RBP15.16■□□□□ 0.02
PTCH1-201ENST00000331920 ARNTP27540 789 aa15.16■□□□□ 0.02
PTCH1-201ENST00000331920 ARSDP51689 593 aa15.16■□□□□ 0.02
PTCH1-201ENST00000331920 PGGHGQ32M88 737 aa15.16■□□□□ 0.02
PTCH1-201ENST00000331920 AMIGO3Q86WK7 504 aa15.16■□□□□ 0.02
PTCH1-201ENST00000331920 ZNF595Q8IYB9 648 aa15.16■□□□□ 0.02
PTCH1-201ENST00000331920 PCDHGA9Q9Y5G4 932 aaKnown RBP15.16■□□□□ 0.02
PTCH1-201ENST00000331920 ICE1Q9Y2F5 2266 aa15.16■□□□□ 0.02
PTCH1-201ENST00000331920 DUSP1P28562 367 aa15.16■□□□□ 0.02
PTCH1-201ENST00000331920 RLN3Q8WXF3 142 aa15.16■□□□□ 0.02
PTCH1-201ENST00000331920 VAMP8Q9BV40 100 aa15.16■□□□□ 0.02
PTCH1-201ENST00000331920 PLSCR1O15162 318 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 ZNF264O43296 627 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 MS4A2Q01362 244 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 TSEN54Q7Z6J9 526 aaKnown RBP15.15■□□□□ 0.02
PTCH1-201ENST00000331920 LILRB4Q8NHJ6 448 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 NARFLQ9H6Q4 476 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 POMT1Q9Y6A1 747 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 OR5K3A6NET4 321 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 OXA1LQ15070 435 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 MOB3AQ96BX8 217 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 CDCP1Q9H5V8 836 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 SNRNP200O75643 2136 aaKnown RBP15.15■□□□□ 0.02
PTCH1-201ENST00000331920 PRSS38A1L453 326 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 PRSS45Q7RTY3 260 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 MRPL10Q7Z7H8 261 aaKnown RBP15.15■□□□□ 0.02
PTCH1-201ENST00000331920 FBXO34Q9NWN3 711 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 ONECUT1Q9UBC0 465 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 ICAM2P13598 275 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 SRP9P49458 86 aaKnown RBP15.15■□□□□ 0.02
PTCH1-201ENST00000331920 RPS25P62851 125 aaKnown RBP15.15■□□□□ 0.02
PTCH1-201ENST00000331920 EMC10Q5UCC4 262 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 GPRIN1Q7Z2K8 1008 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 CAMKMTQ7Z624 323 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 PDZD3Q86UT5 571 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 RBPMSQ93062 196 aaKnown RBP15.15■□□□□ 0.02
PTCH1-201ENST00000331920 UCN3Q969E3 161 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 ITPKCQ96DU7 683 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 TRAV34A0A0B4J273 112 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 KIAA1324LA8MWY0 1029 aaPredicted RBP15.15■□□□□ 0.02
PTCH1-201ENST00000331920 ITGB7P26010 798 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 TAS2R45P59539 299 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 WDR5P61964 334 aaKnown RBP15.15■□□□□ 0.02
PTCH1-201ENST00000331920 ZNF691Q5VV52 312 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 CLEC14AQ86T13 490 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 ZNF573Q86YE8 665 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 USP32Q8NFA0 1604 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 TRBV4-1A0A0J9YWV2 114 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 SBK2P0C263 348 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 GABRB3P28472 473 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 ASH2LQ9UBL3 628 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 A0A1B0GVG6 124 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 ZNF727A8MUV8 499 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 CNMDO75829 334 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 CPEP16870 476 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 ZNF300Q96RE9 604 aaPredicted RBP15.15■□□□□ 0.02
PTCH1-201ENST00000331920 BTNL2Q9UIR0 455 aa15.15■□□□□ 0.02
PTCH1-201ENST00000331920 ROBO1Q9Y6N7 1651 aa15.14■□□□□ 0.01
PTCH1-201ENST00000331920 RFPL4AA6NLU0 287 aa15.14■□□□□ 0.01
PTCH1-201ENST00000331920 RFPL4AL1F8VTS6 287 aa15.14■□□□□ 0.01
PTCH1-201ENST00000331920 FDXRP22570 491 aa15.14■□□□□ 0.01
PTCH1-201ENST00000331920 KHSRPQ92945 711 aaKnown RBP eCLIP15.14■□□□□ 0.01
PTCH1-201ENST00000331920 TMEM106AQ96A25 262 aa15.14■□□□□ 0.01
PTCH1-201ENST00000331920 ZNF778Q96MU6 729 aa15.14■□□□□ 0.01
PTCH1-201ENST00000331920 GGNBP1Q5YKI7 109 aa15.14■□□□□ 0.01
PTCH1-201ENST00000331920 SPINK4O60575 86 aa15.14■□□□□ 0.01
PTCH1-201ENST00000331920 ZNF133P52736 654 aaPredicted RBP15.14■□□□□ 0.01
PTCH1-201ENST00000331920 OR1A1Q9P1Q5 309 aa15.14■□□□□ 0.01
PTCH1-201ENST00000331920 PIK3C2BO00750 1634 aa15.14■□□□□ 0.01
PTCH1-201ENST00000331920 TO15178 435 aa15.14■□□□□ 0.01
PTCH1-201ENST00000331920 GJA4P35212 333 aa15.14■□□□□ 0.01
PTCH1-201ENST00000331920 PLA1AQ53H76 456 aa15.14■□□□□ 0.01
PTCH1-201ENST00000331920 CPEB3Q8NE35 698 aaKnown RBP15.14■□□□□ 0.01
PTCH1-201ENST00000331920 FAM71CQ8NEG0 241 aa15.14■□□□□ 0.01
PTCH1-201ENST00000331920 SLCO2A1Q92959 643 aa15.14■□□□□ 0.01
PTCH1-201ENST00000331920 PLIN4Q96Q06 1357 aa15.14■□□□□ 0.01
PTCH1-201ENST00000331920 TARBP1Q13395 1621 aaKnown RBP15.14■□□□□ 0.01
PTCH1-201ENST00000331920 SLC22A24Q8N4F4 322 aa15.14■□□□□ 0.01
PTCH1-201ENST00000331920 SIRPB1O00241 398 aa15.14■□□□□ 0.01
PTCH1-201ENST00000331920 FABP4P15090 132 aa15.14■□□□□ 0.01
PTCH1-201ENST00000331920 RAB5AP20339 215 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms