RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 GLO1Q04760 184 aa12.49□□□□□ -0.41
MSRA-201ENST00000317173 MRPL49Q13405 166 aaKnown RBP12.49□□□□□ -0.41
MSRA-201ENST00000317173 CAMK2DQ13557 499 aa12.49□□□□□ -0.41
MSRA-201ENST00000317173 C3AR1Q16581 482 aa12.49□□□□□ -0.41
MSRA-201ENST00000317173 MCEMP1Q8IX19 187 aa12.49□□□□□ -0.41
MSRA-201ENST00000317173 TMEM123Q8N131 208 aa12.49□□□□□ -0.41
MSRA-201ENST00000317173 OR51G2Q8NGK0 314 aa12.49□□□□□ -0.41
MSRA-201ENST00000317173 OR6K6Q8NGW6 343 aa12.49□□□□□ -0.41
MSRA-201ENST00000317173 SGCDQ92629 289 aa12.49□□□□□ -0.41
MSRA-201ENST00000317173 TMEM54Q969K7 222 aa12.49□□□□□ -0.41
MSRA-201ENST00000317173 NMD3Q96D46 503 aaKnown RBP12.49□□□□□ -0.41
MSRA-201ENST00000317173 OR2M2Q96R28 347 aa12.49□□□□□ -0.41
MSRA-201ENST00000317173 CNN2Q99439 309 aaKnown RBP12.49□□□□□ -0.41
MSRA-201ENST00000317173 SLX1AQ9BQ83 275 aa12.49□□□□□ -0.41
MSRA-201ENST00000317173 ADGRL4Q9HBW9 690 aa12.49□□□□□ -0.41
MSRA-201ENST00000317173 SRA1Q9HD15 236 aaKnown RBP12.49□□□□□ -0.41
MSRA-201ENST00000317173 BATF3Q9NR55 127 aa12.49□□□□□ -0.41
MSRA-201ENST00000317173 PARPBPQ9NWS1 579 aa12.49□□□□□ -0.41
MSRA-201ENST00000317173 CHCHD3Q9NX63 227 aaKnown RBP12.49□□□□□ -0.41
MSRA-201ENST00000317173 CLCF1Q9UBD9 225 aa12.49□□□□□ -0.41
MSRA-201ENST00000317173 ING1Q9UK53 422 aaPredicted RBP12.49□□□□□ -0.41
MSRA-201ENST00000317173 OR6C65A6NJZ3 312 aa12.48□□□□□ -0.41
MSRA-201ENST00000317173 J3QRE1 110 aa12.48□□□□□ -0.41
MSRA-201ENST00000317173 SLC43A1O75387 559 aa12.48□□□□□ -0.41
MSRA-201ENST00000317173 AQP8O94778 261 aa12.48□□□□□ -0.41
MSRA-201ENST00000317173 AGFG2O95081 481 aa12.48□□□□□ -0.41
MSRA-201ENST00000317173 CTLA4P16410 223 aa12.48□□□□□ -0.41
MSRA-201ENST00000317173 JUNBP17275 347 aaPredicted RBP12.48□□□□□ -0.41
MSRA-201ENST00000317173 C21orf33P30042 268 aaPredicted RBP12.48□□□□□ -0.41
MSRA-201ENST00000317173 PTGS2P35354 604 aa12.48□□□□□ -0.41
MSRA-201ENST00000317173 RPL5P46777 297 aaKnown RBP12.48□□□□□ -0.41
MSRA-201ENST00000317173 CSNK1A1P48729 337 aa12.48□□□□□ -0.41
MSRA-201ENST00000317173 TDGF1P3P51864 188 aa12.48□□□□□ -0.41
MSRA-201ENST00000317173 PIGFQ07326 219 aa12.48□□□□□ -0.41
MSRA-201ENST00000317173 IRF3Q14653 427 aa12.48□□□□□ -0.41
MSRA-201ENST00000317173 KCTD8Q6ZWB6 473 aa12.48□□□□□ -0.41
MSRA-201ENST00000317173 AAED1Q7RTV5 226 aa12.48□□□□□ -0.41
MSRA-201ENST00000317173 SYT14Q8NB59 555 aa12.48□□□□□ -0.41
MSRA-201ENST00000317173 PRR7Q8TB68 274 aa12.48□□□□□ -0.41
MSRA-201ENST00000317173 TSSK2Q96PF2 358 aa12.48□□□□□ -0.41
MSRA-201ENST00000317173 MYCBPQ99417 103 aaPredicted RBP12.48□□□□□ -0.41
MSRA-201ENST00000317173 MNTQ99583 582 aa12.48□□□□□ -0.41
MSRA-201ENST00000317173 MARCH7Q9H992 704 aa12.48□□□□□ -0.41
MSRA-201ENST00000317173 CALHM2Q9HA72 323 aa12.48□□□□□ -0.41
MSRA-201ENST00000317173 GLTPQ9NZD2 209 aa12.48□□□□□ -0.41
MSRA-201ENST00000317173 ERGIC3Q9Y282 383 aa12.48□□□□□ -0.41
MSRA-201ENST00000317173 COMMD3-BMI1R4GMX3 469 aa12.48□□□□□ -0.41
MSRA-201ENST00000317173 DCTN6O00399 190 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 WDR1O75083 606 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 TFAP2AP05549 437 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 YES1P07947 543 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 HOXD4P09016 255 aaPredicted RBP12.47□□□□□ -0.41
MSRA-201ENST00000317173 OR2T7P0C7T2 308 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 PCMT1P22061 227 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 PYCR1P32322 319 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 EMX1Q04741 257 aaPredicted RBP12.47□□□□□ -0.41
MSRA-201ENST00000317173 SRSF1Q07955 248 aaKnown RBP eCLIP12.47□□□□□ -0.41
MSRA-201ENST00000317173 EIF2S3LQ2VIR3 472 aaKnown RBP12.47□□□□□ -0.41
MSRA-201ENST00000317173 RIPPLY2Q5TAB7 128 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 SLC25A47Q6Q0C1 308 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 P4HA3Q7Z4N8 544 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 C20orf196Q8IYI0 205 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 ACBD7Q8N6N7 88 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 OR4F15Q8NGB8 312 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 OR51L1Q8NGJ5 315 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 OR6N1Q8NGY5 312 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 OR2T27Q8NH04 317 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 WNT2BQ93097 391 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 ZMYND19Q96E35 227 aaPredicted RBP12.47□□□□□ -0.41
MSRA-201ENST00000317173 ACOT13Q9NPJ3 140 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 FOXD3Q9UJU5 478 aaPredicted RBP12.47□□□□□ -0.41
MSRA-201ENST00000317173 NOSIPQ9Y314 301 aaKnown RBP12.47□□□□□ -0.41
MSRA-201ENST00000317173 ARHGAP21Q5T5U3 1957 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 TMEM129A0AVI4 362 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 CD8B2A6NJW9 211 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 FIGNL2A6NMB9 653 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 MRPL33O75394 65 aaKnown RBP12.47□□□□□ -0.41
MSRA-201ENST00000317173 WISP2O76076 250 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 HRGP04196 525 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 ALDH3B2P48448 385 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 SELENOPP49908 381 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 HSF2Q03933 536 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 ACSF3Q4G176 576 aaPredicted RBP12.47□□□□□ -0.41
MSRA-201ENST00000317173 C10orf128Q5T292 105 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 OR2A2Q6IF42 318 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 SLC16A9Q7RTY1 509 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 MED12LQ86YW9 2145 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 GLB1L2Q8IW92 636 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 WDFY1Q8IWB7 410 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 ZNRF4Q8WWF5 429 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 MCHR2Q969V1 340 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 MRPL48Q96GC5 212 aaKnown RBP12.47□□□□□ -0.41
MSRA-201ENST00000317173 GMPPAQ96IJ6 420 aaPredicted RBP12.47□□□□□ -0.41
MSRA-201ENST00000317173 MND1Q9BWT6 205 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 LINC00470Q9BZP3 86 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 B3GAT2Q9NPZ5 323 aa12.47□□□□□ -0.41
MSRA-201ENST00000317173 RELNP78509 3460 aa12.46□□□□□ -0.41
MSRA-201ENST00000317173 PTPN13Q12923 2485 aa12.46□□□□□ -0.41
MSRA-201ENST00000317173 MYL12BO14950 172 aa12.46□□□□□ -0.42
MSRA-201ENST00000317173 SS18L1O75177 396 aaPredicted RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms