RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 ERVK-16P61578 105 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 RPL18Q07020 188 aaKnown RBP12.79□□□□□ -0.36
CDH3-201ENST00000264012 ZNF793Q6ZN11 406 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 LYSMD2Q8IV50 215 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 FAM109AQ8N4B1 249 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 NKAIN3Q8N8D7 197 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 LINC01555Q8NAE3 123 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 OR2A14Q96R47 310 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 SLC19A3Q9BZV2 496 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 OCEL1Q9H607 264 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 METTL17Q9H7H0 456 aaPredicted RBP12.79□□□□□ -0.36
CDH3-201ENST00000264012 OR14J1Q9UGF5 321 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 COL11A2P13942 1736 aaPredicted RBP12.79□□□□□ -0.36
CDH3-201ENST00000264012 SHANK3Q9BYB0 1731 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 PRAMEF27A3QJZ7 478 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 TMEM221A6NGB7 291 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 SLC34A2O95436 690 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 WNT3P56703 355 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 SLC9A3R2Q15599 337 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 ACTBL2Q562R1 376 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 ZNF547Q8IVP9 402 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 MAML2Q8IZL2 1156 aaPredicted RBP12.79□□□□□ -0.36
CDH3-201ENST00000264012 BBS1Q8NFJ9 593 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 LRFN5Q96NI6 719 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 DCLRE1CQ96SD1 692 aaKnown RBP12.79□□□□□ -0.36
CDH3-201ENST00000264012 ASF1BQ9NVP2 202 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 ZNF346Q9UL40 294 aaKnown RBP12.79□□□□□ -0.36
CDH3-201ENST00000264012 MYF5P13349 255 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 CCL11P51671 97 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 EMC4Q5J8M3 183 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 Q6ZTK2 550 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 PGAP1Q75T13 922 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 YRDCQ86U90 279 aaKnown RBP12.79□□□□□ -0.36
CDH3-201ENST00000264012 CELF2-AS1Q8N7Q2 184 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 GALNT9Q9HCQ5 603 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 NDUFB11Q9NX14 153 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 KCNE3Q9Y6H6 103 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 CD300LBA8K4G0 201 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 TSPAN15O95858 294 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 ZGLP1P0C6A0 271 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 NME1P15531 152 aaKnown RBP12.79□□□□□ -0.36
CDH3-201ENST00000264012 TUBG1P23258 451 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 SSTR2P30874 369 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 EMDP50402 254 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 PRAMEF9Q5VWM5 478 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 ZNF585AQ6P3V2 769 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 TMEM71Q6P5X7 295 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 YARS2Q9Y2Z4 477 aaKnown RBP12.79□□□□□ -0.36
CDH3-201ENST00000264012 CROCCQ5TZA2 2017 aa12.79□□□□□ -0.36
CDH3-201ENST00000264012 LOC100289279A0A1B0GTE1 492 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 VAMP5O95183 116 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 IL2RGP31785 369 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 MAP2K6P52564 334 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 PNLIPRP2P54317 469 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 GRB2P62993 217 aaKnown RBP12.78□□□□□ -0.36
CDH3-201ENST00000264012 RNF165Q6ZSG1 346 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 KLHDC8BQ8IXV7 354 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 ST8SIA1Q92185 356 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 ZNF285Q96NJ3 590 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 ZMAT3Q9HA38 289 aaKnown RBP12.78□□□□□ -0.36
CDH3-201ENST00000264012 NEU3Q9UQ49 428 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 POLR2AP24928 1970 aaKnown RBP12.78□□□□□ -0.36
CDH3-201ENST00000264012 FAM166BA8MTA8 275 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 PRAMEF4O60810 478 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 TCRBP04435 133 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 CPEP16870 476 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 ADGRE4PQ86SQ3 457 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 CADM3Q8N126 398 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 RNF128Q8TEB7 428 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 TSPAN10Q9H1Z9 355 aaPredicted RBP12.78□□□□□ -0.36
CDH3-201ENST00000264012 A0A1W2PNR3 127 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 CD1EP15812 388 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 CPT2P23786 658 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 TAS2R20P59543 309 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 IKZF1Q13422 519 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 KIAA0907Q7Z7F0 614 aaPredicted RBP12.78□□□□□ -0.36
CDH3-201ENST00000264012 LHX6Q9UPM6 363 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 MRPS2Q9Y399 296 aaKnown RBP12.78□□□□□ -0.36
CDH3-201ENST00000264012 MCRIP1C9JLW8 97 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 SURF4O15260 269 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 CBX7O95931 251 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 GPR3P46089 330 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 AGERQ15109 404 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 KIRREL2Q6UWL6 708 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 ARL11Q969Q4 196 aa12.78□□□□□ -0.36
CDH3-201ENST00000264012 FRG2CA6NGY1 282 aa12.77□□□□□ -0.36
CDH3-201ENST00000264012 CTSVO60911 334 aa12.77□□□□□ -0.36
CDH3-201ENST00000264012 TRAPPC2P0DI81 140 aa12.77□□□□□ -0.36
CDH3-201ENST00000264012 TRAPPC2BP0DI82 140 aa12.77□□□□□ -0.36
CDH3-201ENST00000264012 RBPJQ06330 500 aa12.77□□□□□ -0.36
CDH3-201ENST00000264012 DMWDQ09019 674 aa12.77□□□□□ -0.36
CDH3-201ENST00000264012 STEAP1BQ6NZ63 245 aa12.77□□□□□ -0.36
CDH3-201ENST00000264012 BPHLQ86WA6 291 aaPredicted RBP12.77□□□□□ -0.36
CDH3-201ENST00000264012 PIGTQ969N2 578 aa12.77□□□□□ -0.36
CDH3-201ENST00000264012 TSSK2Q96PF2 358 aa12.77□□□□□ -0.36
CDH3-201ENST00000264012 SULT4A1Q9BR01 284 aa12.77□□□□□ -0.36
CDH3-201ENST00000264012 FBXO8Q9NRD0 319 aa12.77□□□□□ -0.36
CDH3-201ENST00000264012 CGGBP1Q9UFW8 167 aaPredicted RBP12.77□□□□□ -0.36
CDH3-201ENST00000264012 GPR160Q9UJ42 338 aa12.77□□□□□ -0.36
CDH3-201ENST00000264012 TRABD2BA6NFA1 517 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms