RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 GDNFP39905 211 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 EMDP50402 254 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 MEP1BQ16820 701 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 SMIM15Q7Z3B0 74 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 RETREG3Q86VR2 466 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 WDR5BQ86VZ2 330 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 OR1S2Q8NGQ3 325 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 STT3BQ8TCJ2 826 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 KCNJ15Q99712 375 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 COQ3Q9NZJ6 369 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 DAPP1Q9UN19 280 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 ZNF831Q5JPB2 1677 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 GFYI3L273 518 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 RAB27BO00194 218 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 LGI1O95970 557 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 SRMP19623 302 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 MAP2K6P52564 334 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 SNRPGP62308 76 aaKnown RBP7.99□□□□□ -1.13
PTCD3-201ENST00000254630 GNB1P62873 340 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 SCGB2A2Q13296 93 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 FGFBP1Q14512 234 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 AGBL4Q5VU57 503 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 PTRH1Q86Y79 214 aaKnown RBP7.99□□□□□ -1.13
PTCD3-201ENST00000254630 LANCL2Q9NS86 450 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 C19orf12Q9NSK7 152 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 CHRNA9Q9UGM1 479 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 C19orf53Q9UNZ5 99 aaPredicted RBP7.99□□□□□ -1.13
PTCD3-201ENST00000254630 NRG2O14511 850 aaPredicted RBP7.99□□□□□ -1.13
PTCD3-201ENST00000254630 PRRG2O14669 202 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 SLC16A6O15403 523 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 PHF1O43189 567 aaPredicted RBP7.99□□□□□ -1.13
PTCD3-201ENST00000254630 NSA2O95478 260 aaKnown RBP7.99□□□□□ -1.13
PTCD3-201ENST00000254630 CD14P08571 375 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 DEFA4P12838 97 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 NFYBP25208 207 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 ATPAF1Q5TC12 328 aaPredicted RBP7.99□□□□□ -1.13
PTCD3-201ENST00000254630 OTUD1Q5VV17 481 aaPredicted RBP7.99□□□□□ -1.13
PTCD3-201ENST00000254630 GLIPR1L1Q6UWM5 242 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 NAA40Q86UY6 237 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 MZB1Q8WU39 189 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 EDEM2Q9BV94 578 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 LUZP4Q9P127 313 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 PCDHGA5Q9Y5G8 931 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 A0A0D9SG52 128 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 A0A1W2PR48 441 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 SHISA7A6NL88 538 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 THBS1P07996 1170 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 ARNTP27540 789 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 ZNF74Q16587 644 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 XKR7Q5GH72 579 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 C9orf152Q5JTZ5 239 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 RFPL4BQ6ZWI9 263 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 OR51D1Q8NGF3 324 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 PATE1Q8WXA2 126 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 GATA6Q92908 595 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 TXN2Q99757 166 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 ZPBPQ9BS86 351 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 SUCNR1Q9BXA5 334 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 CNTNAP3Q9BZ76 1288 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 C20orf85Q9H1P6 137 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 TUBB1Q9H4B7 451 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 KCNJ16Q9NPI9 418 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 PTTG3PQ9NZH4 202 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 CD300AQ9UGN4 299 aa7.99□□□□□ -1.13
PTCD3-201ENST00000254630 SSX4O60224 188 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 CLDN1O95832 211 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 PPP3CBP16298 524 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 RUNX2Q13950 521 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 TMEM102Q8N9M5 508 aaPredicted RBP7.98□□□□□ -1.13
PTCD3-201ENST00000254630 SLC16A11Q8NCK7 471 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 TEX37Q96LM6 180 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 SEMA4CQ9C0C4 833 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 EMC7Q9NPA0 242 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 TAS2R4Q9NYW5 299 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 ADAMTSL1Q8N6G6 1762 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 ZC3H12DA2A288 527 aaKnown RBP7.98□□□□□ -1.13
PTCD3-201ENST00000254630 PMS2P1A4D2B8 440 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 CT45A6P0DMU7 189 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 CT45A5P0DMU8 189 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 CT45A7P0DMV0 189 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 CT45A8P0DMV1 189 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 CT45A9P0DMV2 189 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 GLB1P16278 677 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 BCKDHBP21953 392 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 SSTR2P30874 369 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 PGFP49763 221 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 IDH3GP51553 393 aaPredicted RBP7.98□□□□□ -1.13
PTCD3-201ENST00000254630 CT45A2Q5DJT8 189 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 CT45A1Q5HYN5 189 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 EMC4Q5J8M3 183 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 OGFOD3Q6PK18 319 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.98□□□□□ -1.13
PTCD3-201ENST00000254630 RPS19BP1Q86WX3 136 aaKnown RBP7.98□□□□□ -1.13
PTCD3-201ENST00000254630 CT45A3Q8NHU0 189 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 DCLRE1CQ96SD1 692 aaKnown RBP7.98□□□□□ -1.13
PTCD3-201ENST00000254630 HRH4Q9H3N8 390 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.98□□□□□ -1.13
PTCD3-201ENST00000254630 EXOSC3Q9NQT5 275 aaKnown RBP7.98□□□□□ -1.13
PTCD3-201ENST00000254630 NPAP1Q9NZP6 1156 aa7.98□□□□□ -1.13
PTCD3-201ENST00000254630 MARF1Q9Y4F3 1742 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms