RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 IFNA1P01562 189 aa11.15□□□□□ -0.63
TSPAN9-201ENST00000011898 TNK1Q13470 666 aa11.15□□□□□ -0.63
TSPAN9-201ENST00000011898 OR7A5Q15622 319 aa11.15□□□□□ -0.63
TSPAN9-201ENST00000011898 USP53Q70EK8 1073 aa11.15□□□□□ -0.63
TSPAN9-201ENST00000011898 SMIM15Q7Z3B0 74 aa11.15□□□□□ -0.63
TSPAN9-201ENST00000011898 DAZLQ92904 295 aaKnown RBP11.15□□□□□ -0.63
TSPAN9-201ENST00000011898 TBC1D20Q96BZ9 403 aa11.15□□□□□ -0.63
TSPAN9-201ENST00000011898 FBXO17Q96EF6 278 aa11.15□□□□□ -0.63
TSPAN9-201ENST00000011898 OR52A5Q9H2C5 316 aa11.15□□□□□ -0.63
TSPAN9-201ENST00000011898 MBNL1Q9NR56 388 aaKnown RBP11.15□□□□□ -0.63
TSPAN9-201ENST00000011898 VSX1Q9NZR4 365 aaPredicted RBP11.15□□□□□ -0.63
TSPAN9-201ENST00000011898 MMP24Q9Y5R2 645 aa11.15□□□□□ -0.63
TSPAN9-201ENST00000011898 WIF1Q9Y5W5 379 aa11.15□□□□□ -0.63
TSPAN9-201ENST00000011898 PLXNA4Q9HCM2 1894 aa11.15□□□□□ -0.63
TSPAN9-201ENST00000011898 KCNE1BA0A087WTH5 132 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 DCDC2BA2VCK2 349 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 APBB3O95704 486 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 F10P00742 488 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 PCMT1P22061 227 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 PTBP1P26599 531 aaKnown RBP eCLIP11.14□□□□□ -0.635e-7■■■■□ 19.8
TSPAN9-201ENST00000011898 LIM2P55344 173 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 SLC9A3R2Q15599 337 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 VAMP3Q15836 100 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 TMEM52BQ4KMG9 183 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 MANEAQ5SRI9 462 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 OR2T2Q6IF00 324 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 OR9A4Q8NGU2 314 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 HAVCR2Q8TDQ0 301 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 TMEM234Q8WY98 164 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 DVL3Q92997 716 aaPredicted RBP11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 MS4A6EQ96DS6 147 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 SCML1Q9UN30 329 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 CEP350Q5VT06 3117 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 ACOD1A6NK06 481 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 LINC00587B1AMM8 73 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 HCKP08631 526 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 MTNR1BP49286 362 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 DPTQ07507 201 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 MFSD12Q6NUT3 480 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 TMEM184AQ6ZMB5 413 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 FAM185AQ8N0U4 392 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 OR4K17Q8NGC6 315 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 OR14A16Q8NHC5 309 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 CDC6Q99741 560 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 NIPSNAP3BQ9BS92 247 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 MARVELD1Q9BSK0 173 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 ENKD1Q9H0I2 346 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 FAM186AA6NE01 2351 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 LINC01565O15544 149 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 PGCP20142 388 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 BSGP35613 385 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 RIDAP52758 137 aaKnown RBP11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 FOXK2Q01167 660 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 HLXQ14774 488 aaPredicted RBP11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 NSDHLQ15738 373 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 CHRFAM7AQ494W8 412 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 TMEM64Q6YI46 380 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 RNF165Q6ZSG1 346 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 FAM24BQ8N5W8 94 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 BBS1Q8NFJ9 593 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 ABHD4Q8TB40 342 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 HDAC8Q9BY41 377 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 NDUFB11Q9NX14 153 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 OBP2AQ9NY56 170 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 EPHA6Q9UF33 1036 aa11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 TESQ9UGI8 421 aaKnown RBP11.14□□□□□ -0.63
TSPAN9-201ENST00000011898 A0A1B0GV90 55 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 FAM230AA0A1W2PPH8 454 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 ARGFXA6NJG6 315 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 FAM74A7A6NL05 159 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 UMAD1C9J7I0 102 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 H2BFMP0C1H6 154 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 RFC3P40938 356 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 OPRD1P41143 372 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 ZNF136P52737 540 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 ZNF239Q16600 458 aaKnown RBP11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 FAM74A3Q4VXF1 159 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 CST9LP1Q5W188 147 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 ZNF322Q6U7Q0 402 aaPredicted RBP11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 HSD17B13Q7Z5P4 300 aaPredicted RBP11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 KIAA1958Q8N8K9 716 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 OR52N1Q8NH53 320 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 OR52I2Q8NH67 350 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 ELF4Q99607 663 aaPredicted RBP11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 DLL4Q9NR61 685 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 PATJQ8NI35 1801 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 TRBV5-3A0A0A0MS03 114 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 A0A0J9YY10 115 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 ANKUB1A6NFN9 424 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 CXCL3P19876 107 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 FGF7P21781 194 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 RFX2P48378 723 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 ERV3-1Q14264 604 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 ARHGAP11BQ3KRB8 267 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 SKA3Q8IX90 412 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 GPR148Q8TDV2 347 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 CHAC2Q8WUX2 184 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 EDEM2Q9BV94 578 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 CTSFQ9UBX1 484 aa11.13□□□□□ -0.63
TSPAN9-201ENST00000011898 MBD1Q9UIS9 605 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms