RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 CebpbP28033 296 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 CdaP56389 146 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Bcl2l15Q08ED0 167 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Rps27Q6ZWU9 84 aaKnown RBP7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Slc6a5Q761V0 799 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Cpeb3Q7TN99 716 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr1166Q7TR27 316 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Psmf1Q8BHL8 271 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Zfp9Q8BIS1 454 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Cnot2Q8C5L3 540 aaKnown RBP7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Sulf2Q8CFG0 875 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Zbtb20Q8K0L9 741 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Vmn1r201Q8R262 300 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Vmn1r208Q8R275 308 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Grk5Q8VEB1 590 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr486Q8VFD0 314 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 CytipQ91VY6 359 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Nmd3Q99L48 503 aaKnown RBP7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 PsphQ99LS3 225 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gdpd3Q99LY2 330 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Zbtb8aQ9CWH1 434 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Q9CYS6 286 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Prps1Q9D7G0 318 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Nkain4Q9JMG4 208 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Prr12E9PYL2 2035 aaKnown RBP7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Celsr3Q91ZI0 3301 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Col4a2P08122 1707 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Cacna1aP97445 2368 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Zfp362B1ASA5 418 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Pcdh17E9PXF0 1157 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Cyp4a31F8WGU9 509 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Matn3O35701 481 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Ifi204P0DOV2 619 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 TpbpaP13438 124 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gna13P27601 377 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 S1pr2P52592 352 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Csrp1P97315 193 aaKnown RBP7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Cd53Q61451 219 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Rrm2bQ6PEE3 351 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Tas2r117Q7M715 330 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Ncs1Q8BNY6 190 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 FkrpQ8CG64 494 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Vmn1r193Q8R258 319 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Seh1lQ8R2U0 360 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr60Q8VGL4 311 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Acsm1Q91VA0 573 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gjc3Q921C1 269 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Klhl22Q99JN2 634 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Bhlhe41Q99PV5 410 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Emc6Q9CQW0 110 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Pop4Q9CR08 221 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Snapc3Q9D2C9 407 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Tmem269Q9D4Y8 254 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Fn3kQ9ER35 309 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Dchs1E9PVD3 3291 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Col6a6Q8C6K9 2265 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Trav8n-2A0A075B633 112 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gm42517A0A1Y7VLQ2 374 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Kiaa1324A2AFS3 1009 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Pcdh1F7BJK1 1077 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Vmn2r28L7N203 852 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Vmn2r89O35199 507 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 OsmrO70458 971 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 DckP43346 260 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Tead3P70210 439 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 MestQ07646 335 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Secisbp2Q3U1C4 858 aaKnown RBP7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Irgm1Q60766 409 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr151Q60893 309 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Spin1Q61142 262 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Adam26bQ6IMH6 699 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 LdahQ8BVA5 326 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Reep4Q8K072 257 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Entpd8Q8K0L2 497 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Pom121Q8K3Z9 1200 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr502Q8VG09 314 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr1090Q8VGA6 313 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Sec16bQ91XT4 1051 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Pfn4Q9D6I3 129 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Med29Q9DB91 199 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Skp2Q9Z0Z3 424 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gm884A2A9H6 3643 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr576A0A0G2JFH3 312 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Xpnpep2B1AVD1 674 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Pou3f1P21952 449 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 GrnP28798 589 aaKnown RBP7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Hoxd1Q01822 328 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Htr1fQ02284 366 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Tbc1d24Q3UUG6 561 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 C130050O18RikQ497Y9 356 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Zfp36l3Q5ISE2 725 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Acvr1bQ61271 505 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Clcn4Q61418 747 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 DraxinQ6PAL1 343 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr1229Q7TQZ9 311 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Fbxl2Q8BH16 423 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gpr107Q8BUV8 551 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 RfkQ8CFV9 155 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Rln3Q8CHK2 141 aa7.84□□□□□ -1.15
Trim39-201ENSMUST00000042717 Klhl25Q8R2P1 589 aa7.84□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms