RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Myo7aP97479 2215 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Sbf1Q6ZPE2 1867 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ube2ql1A0PJN4 161 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 DhfrP00375 187 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Tcte3P11985 191 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Gpr85P60894 370 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Scgb2b2Q6UGQ3 114 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Acsm4Q80W40 580 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Arhgap22Q8BL80 702 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Plcxd3Q8BLJ3 321 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr1504Q8VFQ4 315 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Sectm1aQ921W8 192 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Eif1bQ9CXU9 113 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Trappc6bQ9D289 158 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Q9D4G1 230 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ndufa9Q9DC69 377 aaKnown RBP10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 SrfQ9JM73 504 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 PrknQ9WVS6 464 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr1084A0A1L1STZ9 313 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr1082A0A1L1SUC9 313 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 A0A286YDG0 184 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 BC035947B2RQY6 695 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Epha8O09127 1004 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Hmgn2P09602 90 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 PlgP20918 812 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 SnrpgP62309 76 aaKnown RBP10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Sntb2Q61235 520 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Kcnc3Q63959 769 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Kng2Q6S9I3 644 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Bdh1Q80XN0 343 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Tubg2Q8VCK3 451 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr1309Q8VF83 320 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr1008Q8VGC7 313 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr60Q8VGL4 311 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Hyal1Q91ZJ9 462 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ogfod3Q9D136 315 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ralgapa2A3KGS3 1872 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Gm14744B1AVU4 173 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Rnf165E9QAU8 347 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 BC117090L7N257 96 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ninj1O70131 152 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 ItgamP05555 1153 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ceacam1P31809 521 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Slc25a44Q8BGF9 314 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Arl6ip5Q8R5J9 188 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr1043Q8VFK4 314 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Egln3Q91UZ4 239 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ubl7Q91W67 380 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 GmfbQ9CQI3 142 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Tmem186Q9CR76 216 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Eef1e1Q9D1M4 174 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 5430402E10RikQ9D3N5 173 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Tmem138Q9D6G5 162 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Adam26aQ9R158 697 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Gm21854A0A087WNM4 232 aa10.9□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Sstr4P49660 385 aa10.9□□□□□ -0.67
Pcif1-201ENSMUST00000041643 St3gal3P97325 374 aa10.9□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Rnase12Q5GAM8 145 aa10.9□□□□□ -0.67
Pcif1-201ENSMUST00000041643 H2-M2Q6W9L1 343 aa10.9□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Tor2aQ8R1J9 321 aa10.9□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Olfr502Q8VG09 314 aa10.9□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Asb16Q8VHS5 453 aa10.9□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Marveld3Q9D956 376 aa10.9□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Plxdc2Q9DC11 530 aa10.9□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Slco2a1Q9EPT5 643 aa10.9□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Decr2Q9WV68 292 aa10.9□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Wnt3P17553 355 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 EnsaP60840 121 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Rsu1Q01730 277 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Olfr125Q14AJ9 320 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Sgk494Q5SYL1 278 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Slitrk5Q810B7 957 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Orai1Q8BWG9 304 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Osbpl11Q8CI95 751 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Babam2Q8K3W0 383 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Socs7Q8VHQ2 579 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Mrgpra6Q91ZC6 301 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Dcbld2Q91ZV3 769 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Mrpl21Q9D1N9 209 aaKnown RBP10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Acot12Q9DBK0 556 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Znf346Q9R0B7 294 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 TfecQ9WTW4 317 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 RbmxQ9WV02 391 aaKnown RBP10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Scn5aQ9JJV9 2019 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Klk1b26P36369 261 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 RelbQ04863 558 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Tob1Q61471 362 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Sox19Q62249 55 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Nptx1Q62443 432 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Olfr1101Q7TR59 310 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Cdkl3Q8BLF2 595 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Mblac1Q8BWY4 260 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Elac1Q8VEB6 362 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Vmn1r137D3YTY1 307 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Vmn1r143E9PUW9 307 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Rpl3lE9PWZ3 407 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Vmn1r157E9Q069 297 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Vmn1r139E9Q8L6 297 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Vmn1r112G3UY48 297 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Vmn1r135K9J7G0 307 aa10.89□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 25.4 ms