RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Akr1c18Q8K023 323 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Esrp2Q8K0G8 717 aaKnown RBP14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Hdac8Q8VH37 377 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Yipf2Q99LP8 312 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Med30Q9CQI9 178 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 9230110F15RikQ9D262 117 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Cdc40Q9DC48 579 aaKnown RBP14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Gm35315A0A1B0GRI2 571 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 4930467E23RikD3Z1P8 350 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Prdm13E9PZZ1 754 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Gm15319E9Q637 350 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Nipsnap2O55126 281 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Zfp60P16374 707 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Tpi1P17751 299 aaKnown RBP14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 GifP52787 417 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Zdhhc2P59267 366 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 DtymkP97930 212 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Khdc4Q3TCX3 612 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Olfr1065Q7TR70 313 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Olfr17Q7TRM9 315 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Zc3h12dQ8BIY3 533 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 B130006D01RikQ8BRH6 153 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Gm21119Q8C646 350 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Peli1Q8C669 418 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Agpat2Q8K3K7 278 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Olfr993Q8VF75 314 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Rbm18Q9CR83 190 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Bex4Q9CWT2 118 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Fam219aQ9D772 157 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Derl3Q9D8K3 228 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Copz2Q9JHH9 205 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Gm21854A0A087WNM4 232 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Ighv16-1A0A0A6YW39 117 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Ino80eA0A0U1RP99 260 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 CatsperdE9Q9F6 805 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 DgkaO88673 730 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Lin7bO88951 207 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 P01851 173 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 P01852 173 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Klk1b9P15949 261 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 LhcgrP30730 700 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Nhlrc4Q3UP44 136 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 1700012B07RikQ3V0S8 276 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Olfr290Q7TS13 315 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Olfr198Q7TS40 306 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Q8C4X7 151 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Slc25a45Q8CFJ7 288 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Cacnb4Q8R0S4 519 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Nkd2Q8VE28 461 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Asb15Q8VHS6 583 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Kti12Q9D1R2 351 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Dapp1Q9QXT1 280 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Anapc1P53995 1944 aaKnown RBP14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Ighv1-13A0A075B5I0 98 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Atxn7l3A2AWT3 347 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Vmn1r67G5E8C1 305 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 MfngO09008 321 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Pmm1O35621 262 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Tspan6O70401 245 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Gpd1P13707 349 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Cd80Q00609 306 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Mmp7Q10738 264 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Gpr39Q5U431 456 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Adam30Q811Q3 732 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 SynprQ8BGN8 265 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Olfr1176Q8VG40 315 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Otub2Q9CQX0 234 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Gtpbp8Q9CY28 285 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Cir1Q9DA19 450 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Fbxl6Q9QXW0 535 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Trbv21A0A0A6YX06 97 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Tox2A2A472 547 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Vmn1r177E9PXM3 309 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Gm8374L7N2A9 172 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Wnt9bO35468 359 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 RradO88667 308 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Q149G0 166 aaKnown RBP14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Ttyh2Q3TH73 532 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Nkx6-3Q3UHX8 262 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Ndufb6Q3UIU2 128 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Zfp947Q8BIQ6 437 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Csnk1g2Q8BVP5 415 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Slc43a2Q8CGA3 568 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Hist1h2ahQ8CGP6 128 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Olfr1094Q8VF13 330 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 SvbpQ99LQ4 66 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Lat2Q9JHL0 203 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Minpp1Q9Z2L6 481 aa14.84□□□□□ -0.03
Trim28-201ENSMUST00000005705 Tcrg-V7A0A0A6YYE8 116 aa14.83□□□□□ -0.03
Trim28-201ENSMUST00000005705 Olfr550E9Q544 316 aa14.83□□□□□ -0.03
Trim28-201ENSMUST00000005705 Kcnab1P63143 401 aa14.83□□□□□ -0.03
Trim28-201ENSMUST00000005705 Perm1Q149B8 807 aa14.83□□□□□ -0.03
Trim28-201ENSMUST00000005705 Olfr146Q60884 306 aa14.83□□□□□ -0.03
Trim28-201ENSMUST00000005705 Cbx5Q61686 191 aaKnown RBP14.83□□□□□ -0.03
Trim28-201ENSMUST00000005705 Tas2r143Q7TQB9 293 aa14.83□□□□□ -0.03
Trim28-201ENSMUST00000005705 Apoa5Q8C7G5 368 aa14.83□□□□□ -0.03
Trim28-201ENSMUST00000005705 Fam25cQ8CF02 89 aa14.83□□□□□ -0.03
Trim28-201ENSMUST00000005705 Mrpl38Q8K2M0 380 aa14.83□□□□□ -0.03
Trim28-201ENSMUST00000005705 Mmp21Q8K3F2 568 aa14.83□□□□□ -0.03
Trim28-201ENSMUST00000005705 Mboat2Q8R3I2 519 aa14.83□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms