RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 OR51A7Q8NH64 312 aa11.16□□□□□ -0.62
PNKP-217ENST00000625216 CNIH3Q8TBE1 160 aa11.16□□□□□ -0.62
PNKP-217ENST00000625216 APH1BQ8WW43 257 aa11.16□□□□□ -0.62
PNKP-217ENST00000625216 KISS1RQ969F8 398 aaPredicted RBP11.16□□□□□ -0.62
PNKP-217ENST00000625216 ARL5BQ96KC2 179 aa11.16□□□□□ -0.62
PNKP-217ENST00000625216 TNFRSF13CQ96RJ3 184 aa11.16□□□□□ -0.62
PNKP-217ENST00000625216 APOL4Q9BPW4 351 aa11.16□□□□□ -0.62
PNKP-217ENST00000625216 FKRPQ9H9S5 495 aa11.16□□□□□ -0.62
PNKP-217ENST00000625216 IL20RAQ9UHF4 553 aa11.16□□□□□ -0.62
PNKP-217ENST00000625216 HSPE1-MOB4S4R3N1 261 aa11.16□□□□□ -0.62
PNKP-217ENST00000625216 HTR3EA5X5Y0 456 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 ZNF814B7Z6K7 855 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 FTCDNL1E5RQL4 147 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 BHLHE40O14503 412 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 FZD7O75084 574 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 IMPDH2P12268 514 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 GABRB1P18505 474 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 GIPRP48546 466 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 SLC16A1P53985 500 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 H3F3AP84243 136 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 FAM69AQ5T7M9 428 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 ABLIM2Q6H8Q1 611 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 RPL13AP3Q6NVV1 102 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 SLC27A4Q6P1M0 643 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 C5orf46Q6UWT4 87 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 IGFN1Q86VF2 1251 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 P2RY8Q86VZ1 359 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 WFDC8Q8IUA0 241 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 CCDC103Q8IW40 242 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 ZNF100Q8IYN0 542 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 C10orf53Q8N6V4 93 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 OR6S1Q8NH40 331 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 MOSPD2Q8NHP6 518 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 S100PBPQ96BU1 408 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 HS3ST6Q96QI5 342 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 TMEM204Q9BSN7 226 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 NAA11Q9BSU3 229 aaPredicted RBP11.15□□□□□ -0.62
PNKP-217ENST00000625216 POTEKPQ9BYX7 375 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 UBTD1Q9HAC8 227 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 NANSQ9NR45 359 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 SEC14L4Q9UDX3 406 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 ZNF229Q9UJW7 825 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 HIF3AQ9Y2N7 669 aa11.15□□□□□ -0.62
PNKP-217ENST00000625216 ZNF716A6NP11 495 aa11.14□□□□□ -0.63
PNKP-217ENST00000625216 MCIDASD6RGH6 385 aa11.14□□□□□ -0.63
PNKP-217ENST00000625216 SMPD2O60906 423 aa11.14□□□□□ -0.63
PNKP-217ENST00000625216 WBP4O75554 376 aaKnown RBP11.14□□□□□ -0.63
PNKP-217ENST00000625216 PPP1R3DO95685 299 aa11.14□□□□□ -0.63
PNKP-217ENST00000625216 LYNP07948 512 aa11.14□□□□□ -0.63
PNKP-217ENST00000625216 TSPAN19P0C672 248 aa11.14□□□□□ -0.63
PNKP-217ENST00000625216 GRPRP30550 384 aa11.14□□□□□ -0.63
PNKP-217ENST00000625216 SLC6A6P31641 620 aa11.14□□□□□ -0.63
PNKP-217ENST00000625216 GRK5P34947 590 aa11.14□□□□□ -0.63
PNKP-217ENST00000625216 AQP2P41181 271 aa11.14□□□□□ -0.63
PNKP-217ENST00000625216 OR2B6P58173 313 aa11.14□□□□□ -0.63
PNKP-217ENST00000625216 CDC42P60953 191 aa11.14□□□□□ -0.63
PNKP-217ENST00000625216 SLC35A1P78382 337 aa11.14□□□□□ -0.63
PNKP-217ENST00000625216 NKX6-1P78426 367 aaPredicted RBP11.14□□□□□ -0.63
PNKP-217ENST00000625216 CDK5R2Q13319 367 aa11.14□□□□□ -0.63
PNKP-217ENST00000625216 TAB1Q15750 504 aa11.14□□□□□ -0.63
PNKP-217ENST00000625216 PRSS57Q6UWY2 283 aa11.14□□□□□ -0.63
PNKP-217ENST00000625216 ZNF704Q6ZNC4 412 aaPredicted RBP11.14□□□□□ -0.63
PNKP-217ENST00000625216 BHLHA15Q7RTS1 189 aaPredicted RBP11.14□□□□□ -0.63
PNKP-217ENST00000625216 NANOGNBQ7Z5D8 188 aa11.14□□□□□ -0.63
PNKP-217ENST00000625216 DEPDC4Q8N2C3 294 aa11.14□□□□□ -0.63
PNKP-217ENST00000625216 ZNF786Q8N393 782 aa11.14□□□□□ -0.63
PNKP-217ENST00000625216 LRRC75AQ8NAA5 344 aa11.14□□□□□ -0.63
PNKP-217ENST00000625216 OR52L1Q8NGH7 329 aa11.14□□□□□ -0.63
PNKP-217ENST00000625216 RHOXF1Q8NHV9 184 aa11.14□□□□□ -0.63
PNKP-217ENST00000625216 ZNF775Q96BV0 537 aaPredicted RBP11.14□□□□□ -0.63
PNKP-217ENST00000625216 PLPPR2Q96GM1 343 aa11.14□□□□□ -0.63
PNKP-217ENST00000625216 ESRP2Q9H6T0 727 aaKnown RBP11.14□□□□□ -0.63
PNKP-217ENST00000625216 PARPBPQ9NWS1 579 aa11.14□□□□□ -0.63
PNKP-217ENST00000625216 IMPAD1Q9NX62 359 aa11.14□□□□□ -0.63
PNKP-217ENST00000625216 NOSIPQ9Y314 301 aaKnown RBP11.14□□□□□ -0.63
PNKP-217ENST00000625216 MED13LQ71F56 2210 aa11.14□□□□□ -0.63
PNKP-217ENST00000625216 M0R082 166 aa11.13□□□□□ -0.63
PNKP-217ENST00000625216 PRKYO43930 277 aa11.13□□□□□ -0.63
PNKP-217ENST00000625216 MRPL33O75394 65 aaKnown RBP11.13□□□□□ -0.63
PNKP-217ENST00000625216 NDUFB2O95178 105 aa11.13□□□□□ -0.63
PNKP-217ENST00000625216 MT-ATP6P00846 226 aa11.13□□□□□ -0.63
PNKP-217ENST00000625216 SMIM18P0DKX4 95 aa11.13□□□□□ -0.63
PNKP-217ENST00000625216 COX5AP20674 150 aa11.13□□□□□ -0.63
PNKP-217ENST00000625216 FMO3P31513 532 aa11.13□□□□□ -0.63
PNKP-217ENST00000625216 IDUAP35475 653 aa11.13□□□□□ -0.63
PNKP-217ENST00000625216 OR7A5Q15622 319 aa11.13□□□□□ -0.63
PNKP-217ENST00000625216 SMN1Q16637 294 aaKnown RBP11.13□□□□□ -0.63
PNKP-217ENST00000625216 TIMM23BQ5SRD1 257 aa11.13□□□□□ -0.63
PNKP-217ENST00000625216 C6orf141Q5SZD1 244 aa11.13□□□□□ -0.63
PNKP-217ENST00000625216 FBXW9Q5XUX1 488 aa11.13□□□□□ -0.63
PNKP-217ENST00000625216 ADAM5Q6NVV9 412 aa11.13□□□□□ -0.63
PNKP-217ENST00000625216 PAQR6Q6TCH4 344 aa11.13□□□□□ -0.63
PNKP-217ENST00000625216 LNX2Q8N448 690 aa11.13□□□□□ -0.63
PNKP-217ENST00000625216 ZNF611Q8N823 705 aa11.13□□□□□ -0.63
PNKP-217ENST00000625216 TCEANCQ8N8B7 351 aa11.13□□□□□ -0.63
PNKP-217ENST00000625216 OR2T33Q8NG76 320 aa11.13□□□□□ -0.63
PNKP-217ENST00000625216 MFSD8Q8NHS3 518 aa11.13□□□□□ -0.63
PNKP-217ENST00000625216 ZNF417Q8TAU3 575 aa11.13□□□□□ -0.63
PNKP-217ENST00000625216 APH1AQ96BI3 265 aa11.13□□□□□ -0.63
PNKP-217ENST00000625216 SLC25A36Q96CQ1 311 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms