RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 CYP2R1Q6VVX0 501 aa12.9□□□□□ -0.34
ATG4D-207ENST00000587256 RINLQ6ZS11 566 aa12.9□□□□□ -0.34
ATG4D-207ENST00000587256 ZNF627Q7L945 461 aa12.9□□□□□ -0.34
ATG4D-207ENST00000587256 DTX2Q86UW9 622 aa12.9□□□□□ -0.34
ATG4D-207ENST00000587256 ARHGAP24Q8N264 748 aa12.9□□□□□ -0.34
ATG4D-207ENST00000587256 MUC15Q8N387 334 aa12.9□□□□□ -0.34
ATG4D-207ENST00000587256 FAM169BQ8N8A8 192 aa12.9□□□□□ -0.34
ATG4D-207ENST00000587256 OR52J3Q8NH60 311 aa12.9□□□□□ -0.34
ATG4D-207ENST00000587256 TRMT61AQ96FX7 289 aaKnown RBP12.9□□□□□ -0.34
ATG4D-207ENST00000587256 TMUB1Q9BVT8 246 aa12.9□□□□□ -0.34
ATG4D-207ENST00000587256 TXNIPQ9H3M7 391 aa12.9□□□□□ -0.34
ATG4D-207ENST00000587256 SEC61A2Q9H9S3 476 aa12.9□□□□□ -0.34
ATG4D-207ENST00000587256 ZNF701Q9NV72 531 aaPredicted RBP12.9□□□□□ -0.34
ATG4D-207ENST00000587256 TMEM38BQ9NVV0 291 aa12.9□□□□□ -0.34
ATG4D-207ENST00000587256 USF3Q68DE3 2245 aa12.9□□□□□ -0.34
ATG4D-207ENST00000587256 ALPK2Q86TB3 2170 aa12.9□□□□□ -0.34
ATG4D-207ENST00000587256 TRBV4-1A0A0J9YWV2 114 aa12.89□□□□□ -0.35
ATG4D-207ENST00000587256 CDC42EP2O14613 210 aa12.89□□□□□ -0.35
ATG4D-207ENST00000587256 TRMUO75648 421 aaKnown RBP12.89□□□□□ -0.35
ATG4D-207ENST00000587256 UBL3O95164 117 aa12.89□□□□□ -0.35
ATG4D-207ENST00000587256 IGHMP01871 453 aa12.89□□□□□ -0.35
ATG4D-207ENST00000587256 PAX1P15863 534 aa12.89□□□□□ -0.35
ATG4D-207ENST00000587256 RPL4P36578 427 aaKnown RBP12.89□□□□□ -0.35
ATG4D-207ENST00000587256 PTDSS1P48651 473 aaKnown RBP12.89□□□□□ -0.35
ATG4D-207ENST00000587256 SMIM11AP58511 58 aa12.89□□□□□ -0.35
ATG4D-207ENST00000587256 RPL27P61353 136 aaKnown RBP12.89□□□□□ -0.35
ATG4D-207ENST00000587256 PIGFQ07326 219 aa12.89□□□□□ -0.35
ATG4D-207ENST00000587256 TAF11Q15544 211 aa12.89□□□□□ -0.35
ATG4D-207ENST00000587256 MTX3Q5HYI7 312 aa12.89□□□□□ -0.35
ATG4D-207ENST00000587256 ARMC4Q5T2S8 1044 aa12.89□□□□□ -0.35
ATG4D-207ENST00000587256 FAM205BPQ63HN1 556 aa12.89□□□□□ -0.35
ATG4D-207ENST00000587256 LRFN4Q6PJG9 635 aa12.89□□□□□ -0.35
ATG4D-207ENST00000587256 TMPRSS11FQ6ZWK6 438 aa12.89□□□□□ -0.35
ATG4D-207ENST00000587256 PIWIL3Q7Z3Z3 882 aaKnown RBP12.89□□□□□ -0.35
ATG4D-207ENST00000587256 MYPOPQ86VE0 399 aaPredicted RBP12.89□□□□□ -0.35
ATG4D-207ENST00000587256 SLC22A24Q8N4F4 322 aa12.89□□□□□ -0.35
ATG4D-207ENST00000587256 OR4K5Q8NGD3 323 aa12.89□□□□□ -0.35
ATG4D-207ENST00000587256 MCHR2Q969V1 340 aa12.89□□□□□ -0.35
ATG4D-207ENST00000587256 CCDC124Q96CT7 223 aaKnown RBP12.89□□□□□ -0.35
ATG4D-207ENST00000587256 Q96MF0 132 aa12.89□□□□□ -0.35
ATG4D-207ENST00000587256 TSPAN32Q96QS1 320 aa12.89□□□□□ -0.35
ATG4D-207ENST00000587256 TNFRSF13CQ96RJ3 184 aa12.89□□□□□ -0.35
ATG4D-207ENST00000587256 MUC13Q9H3R2 512 aa12.89□□□□□ -0.35
ATG4D-207ENST00000587256 NOX3Q9HBY0 568 aa12.89□□□□□ -0.35
ATG4D-207ENST00000587256 CBLN4Q9NTU7 201 aa12.89□□□□□ -0.35
ATG4D-207ENST00000587256 ACTR3BQ9P1U1 418 aa12.89□□□□□ -0.35
ATG4D-207ENST00000587256 PRPF19Q9UMS4 504 aaKnown RBP12.89□□□□□ -0.35
ATG4D-207ENST00000587256 AURKCQ9UQB9 309 aa12.89□□□□□ -0.35
ATG4D-207ENST00000587256 OVOL3O00110 214 aa12.88□□□□□ -0.35
ATG4D-207ENST00000587256 GADD45GO95257 159 aa12.88□□□□□ -0.35
ATG4D-207ENST00000587256 SLC2A10O95528 541 aa12.88□□□□□ -0.35
ATG4D-207ENST00000587256 OR8G3PP0DMU2 310 aa12.88□□□□□ -0.35
ATG4D-207ENST00000587256 T-ENOLP0DO92 83 aa12.88□□□□□ -0.35
ATG4D-207ENST00000587256 ACVR1BP36896 505 aa12.88□□□□□ -0.35
ATG4D-207ENST00000587256 GIPRP48546 466 aa12.88□□□□□ -0.35
ATG4D-207ENST00000587256 FMODQ06828 376 aa12.88□□□□□ -0.35
ATG4D-207ENST00000587256 SEC23BQ15437 767 aa12.88□□□□□ -0.35
ATG4D-207ENST00000587256 ZBED5Q49AG3 693 aa12.88□□□□□ -0.35
ATG4D-207ENST00000587256 VHLLQ6RSH7 139 aa12.88□□□□□ -0.35
ATG4D-207ENST00000587256 PRSS57Q6UWY2 283 aa12.88□□□□□ -0.35
ATG4D-207ENST00000587256 TRPM8Q7Z2W7 1104 aa12.88□□□□□ -0.35
ATG4D-207ENST00000587256 DHFR2Q86XF0 187 aa12.88□□□□□ -0.35
ATG4D-207ENST00000587256 ZDHHC21Q8IVQ6 265 aa12.88□□□□□ -0.35
ATG4D-207ENST00000587256 HTRA1Q92743 480 aa12.88□□□□□ -0.35
ATG4D-207ENST00000587256 HDAC2Q92769 488 aaKnown RBP12.88□□□□□ -0.35
ATG4D-207ENST00000587256 RSRC1Q96IZ7 334 aaKnown RBP12.88□□□□□ -0.35
ATG4D-207ENST00000587256 DHRS1Q96LJ7 313 aa12.88□□□□□ -0.35
ATG4D-207ENST00000587256 SEPHS2Q99611 448 aa12.88□□□□□ -0.35
ATG4D-207ENST00000587256 ALG12Q9BV10 488 aa12.88□□□□□ -0.35
ATG4D-207ENST00000587256 CACNG6Q9BXT2 260 aa12.88□□□□□ -0.35
ATG4D-207ENST00000587256 MRPL13Q9BYD1 178 aaKnown RBP12.88□□□□□ -0.35
ATG4D-207ENST00000587256 MED13LQ71F56 2210 aa12.88□□□□□ -0.35
ATG4D-207ENST00000587256 IGHV2OR16-5A0A0B4J2B6 119 aa12.87□□□□□ -0.35
ATG4D-207ENST00000587256 A6NIZ1 184 aa12.87□□□□□ -0.35
ATG4D-207ENST00000587256 STAMBPO95630 424 aa12.87□□□□□ -0.35
ATG4D-207ENST00000587256 CD8AP01732 235 aa12.87□□□□□ -0.35
ATG4D-207ENST00000587256 BMP4P12644 408 aa12.87□□□□□ -0.35
ATG4D-207ENST00000587256 CALCRP30988 508 aa12.87□□□□□ -0.35
ATG4D-207ENST00000587256 RRM2P31350 389 aa12.87□□□□□ -0.35
ATG4D-207ENST00000587256 APOBEC3AP31941 199 aaPredicted RBP12.87□□□□□ -0.35
ATG4D-207ENST00000587256 RAP1BP61224 184 aa12.87□□□□□ -0.35
ATG4D-207ENST00000587256 RAB1AP62820 205 aa12.87□□□□□ -0.35
ATG4D-207ENST00000587256 RAP1AP62834 184 aa12.87□□□□□ -0.35
ATG4D-207ENST00000587256 ERVK-25P63136 954 aa12.87□□□□□ -0.35
ATG4D-207ENST00000587256 HIST3H3Q16695 136 aa12.87□□□□□ -0.35
ATG4D-207ENST00000587256 C10orf128Q5T292 105 aa12.87□□□□□ -0.35
ATG4D-207ENST00000587256 LCN8Q6JVE9 175 aa12.87□□□□□ -0.35
ATG4D-207ENST00000587256 SKA3Q8IX90 412 aa12.87□□□□□ -0.35
ATG4D-207ENST00000587256 LRRC75AQ8NAA5 344 aa12.87□□□□□ -0.35
ATG4D-207ENST00000587256 OR4F15Q8NGB8 312 aa12.87□□□□□ -0.35
ATG4D-207ENST00000587256 NSMAFQ92636 917 aa12.87□□□□□ -0.35
ATG4D-207ENST00000587256 KCNK17Q96T54 332 aa12.87□□□□□ -0.35
ATG4D-207ENST00000587256 SH3GL3Q99963 347 aa12.87□□□□□ -0.35
ATG4D-207ENST00000587256 GRIP2Q9C0E4 1043 aa12.87□□□□□ -0.35
ATG4D-207ENST00000587256 DENND2DQ9H6A0 471 aaPredicted RBP12.87□□□□□ -0.35
ATG4D-207ENST00000587256 SMURF2Q9HAU4 748 aa12.87□□□□□ -0.35
ATG4D-207ENST00000587256 CA10Q9NS85 328 aa12.87□□□□□ -0.35
ATG4D-207ENST00000587256 B3GNT2Q9NY97 397 aa12.87□□□□□ -0.35
ATG4D-207ENST00000587256 ZNF224Q9NZL3 707 aa12.87□□□□□ -0.35
ATG4D-207ENST00000587256 FBXL3Q9UKT7 428 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms