RNA–Protein interactions for RNA: ENST00000585913.5

CIRBP-205, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-205ENST00000585913 MYOZ1Q9NP98 299 aaPredicted RBP18.72■□□□□ 0.59
CIRBP-205ENST00000585913 YAE1D1Q9NRH1 226 aa18.72■□□□□ 0.59
CIRBP-205ENST00000585913 STX18Q9P2W9 335 aaKnown RBP18.72■□□□□ 0.59
CIRBP-205ENST00000585913 CMAHPQ9Y471 501 aa18.72■□□□□ 0.59
CIRBP-205ENST00000585913 CENPBD1B2RD01 187 aa18.71■□□□□ 0.59
CIRBP-205ENST00000585913 NDUFAB1O14561 156 aa18.71■□□□□ 0.59
CIRBP-205ENST00000585913 GPRIN2O60269 458 aa18.71■□□□□ 0.59
CIRBP-205ENST00000585913 PIP5K1CO60331 668 aa18.71■□□□□ 0.59
CIRBP-205ENST00000585913 ERCC1P07992 297 aaPredicted RBP18.71■□□□□ 0.59
CIRBP-205ENST00000585913 PATE4P0C8F1 98 aa18.71■□□□□ 0.59
CIRBP-205ENST00000585913 NR4A1P22736 598 aa18.71■□□□□ 0.59
CIRBP-205ENST00000585913 LSP1P33241 339 aa18.71■□□□□ 0.59
CIRBP-205ENST00000585913 YAP1P46937 504 aaKnown RBP18.71■□□□□ 0.59
CIRBP-205ENST00000585913 ZNF84P51523 738 aa18.71■□□□□ 0.59
CIRBP-205ENST00000585913 MYBPC1Q00872 1141 aa18.71■□□□□ 0.59
CIRBP-205ENST00000585913 GALK2Q01415 458 aa18.71■□□□□ 0.59
CIRBP-205ENST00000585913 RUNX1T1Q06455 604 aa18.71■□□□□ 0.59
CIRBP-205ENST00000585913 RAB39AQ14964 217 aa18.71■□□□□ 0.59
CIRBP-205ENST00000585913 CARTPTQ16568 116 aa18.71■□□□□ 0.59
CIRBP-205ENST00000585913 TMEM249Q2WGJ8 235 aa18.71■□□□□ 0.59
CIRBP-205ENST00000585913 HACD2Q6Y1H2 254 aa18.71■□□□□ 0.59
CIRBP-205ENST00000585913 SYT14Q8NB59 555 aa18.71■□□□□ 0.59
CIRBP-205ENST00000585913 MOSPD2Q8NHP6 518 aa18.71■□□□□ 0.59
CIRBP-205ENST00000585913 GEMIN6Q8WXD5 167 aaKnown RBP18.71■□□□□ 0.59
CIRBP-205ENST00000585913 MCHR2Q969V1 340 aa18.71■□□□□ 0.59
CIRBP-205ENST00000585913 PIMREGQ9BSJ6 248 aa18.71■□□□□ 0.59
CIRBP-205ENST00000585913 FNDC11Q9BVV2 318 aa18.71■□□□□ 0.59
CIRBP-205ENST00000585913 DYNLRB1Q9NP97 96 aa18.71■□□□□ 0.59
CIRBP-205ENST00000585913 HTR3EA5X5Y0 456 aa18.7■□□□□ 0.58
CIRBP-205ENST00000585913 NDUFS8O00217 210 aa18.7■□□□□ 0.58
CIRBP-205ENST00000585913 CRLF1O75462 422 aa18.7■□□□□ 0.58
CIRBP-205ENST00000585913 TRMUO75648 421 aaKnown RBP18.7■□□□□ 0.58
CIRBP-205ENST00000585913 TSPAN19P0C672 248 aa18.7■□□□□ 0.58
CIRBP-205ENST00000585913 IFI30P13284 250 aa18.7■□□□□ 0.58
CIRBP-205ENST00000585913 ZNF35P13682 527 aa18.7■□□□□ 0.58
CIRBP-205ENST00000585913 ACADSP16219 412 aa18.7■□□□□ 0.58
CIRBP-205ENST00000585913 GSK3BP49841 420 aa18.7■□□□□ 0.58
CIRBP-205ENST00000585913 HIST3H3Q16695 136 aa18.7■□□□□ 0.58
CIRBP-205ENST00000585913 IFI44LQ53G44 452 aa18.7■□□□□ 0.58
CIRBP-205ENST00000585913 GKAP1Q5VSY0 366 aaPredicted RBP18.7■□□□□ 0.58
CIRBP-205ENST00000585913 C8orf82Q6P1X6 216 aaPredicted RBP18.7■□□□□ 0.58
CIRBP-205ENST00000585913 TMEM53Q6P2H8 277 aa18.7■□□□□ 0.58
CIRBP-205ENST00000585913 FKBP9P1Q75LS8 142 aa18.7■□□□□ 0.58
CIRBP-205ENST00000585913 CBLL1Q75N03 491 aa18.7■□□□□ 0.58
CIRBP-205ENST00000585913 OFCC1Q8IZS5 231 aa18.7■□□□□ 0.58
CIRBP-205ENST00000585913 OR4K5Q8NGD3 323 aa18.7■□□□□ 0.58
CIRBP-205ENST00000585913 FGFBP3Q8TAT2 258 aa18.7■□□□□ 0.58
CIRBP-205ENST00000585913 BPIFA2Q96DR5 249 aa18.7■□□□□ 0.58
CIRBP-205ENST00000585913 CMTM5Q96DZ9 223 aa18.7■□□□□ 0.58
CIRBP-205ENST00000585913 DOK1Q99704 481 aa18.7■□□□□ 0.58
CIRBP-205ENST00000585913 SH3GL3Q99963 347 aa18.7■□□□□ 0.58
CIRBP-205ENST00000585913 KCTD14Q9BQ13 255 aaPredicted RBP18.7■□□□□ 0.58
CIRBP-205ENST00000585913 MRPL13Q9BYD1 178 aaKnown RBP18.7■□□□□ 0.58
CIRBP-205ENST00000585913 FAM107BQ9H098 131 aa18.7■□□□□ 0.58
CIRBP-205ENST00000585913 RNF121Q9H920 327 aa18.7■□□□□ 0.58
CIRBP-205ENST00000585913 RHCGQ9UBD6 479 aa18.7■□□□□ 0.58
CIRBP-205ENST00000585913 TMEM129A0AVI4 362 aa18.69■□□□□ 0.58
CIRBP-205ENST00000585913 SH3PXD2BA1X283 911 aa18.69■□□□□ 0.58
CIRBP-205ENST00000585913 J3KTA2 159 aa18.69■□□□□ 0.58
CIRBP-205ENST00000585913 SERPINA1P01009 418 aa18.69■□□□□ 0.58
CIRBP-205ENST00000585913 SERPINA5P05154 406 aa18.69■□□□□ 0.58
CIRBP-205ENST00000585913 SAGP10523 405 aaPredicted RBP18.69■□□□□ 0.58
CIRBP-205ENST00000585913 USF1P22415 310 aaPredicted RBP18.69■□□□□ 0.58
CIRBP-205ENST00000585913 SEC24CP53992 1094 aa18.69■□□□□ 0.58
CIRBP-205ENST00000585913 RPS23P62266 143 aaKnown RBP18.69■□□□□ 0.58
CIRBP-205ENST00000585913 LAPTM4AQ15012 233 aa18.69■□□□□ 0.58
CIRBP-205ENST00000585913 TRAM2Q15035 370 aa18.69■□□□□ 0.58
CIRBP-205ENST00000585913 SLC36A2Q495M3 483 aa18.69■□□□□ 0.58
CIRBP-205ENST00000585913 ALG10Q5BKT4 473 aa18.69■□□□□ 0.58
CIRBP-205ENST00000585913 DPPA2Q7Z7J5 298 aa18.69■□□□□ 0.58
CIRBP-205ENST00000585913 PRIMA1Q86XR5 153 aa18.69■□□□□ 0.58
CIRBP-205ENST00000585913 FAM162AQ96A26 154 aa18.69■□□□□ 0.58
CIRBP-205ENST00000585913 SEPHS2Q99611 448 aa18.69■□□□□ 0.58
CIRBP-205ENST00000585913 NSRP1Q9H0G5 558 aaKnown RBP18.69■□□□□ 0.58
CIRBP-205ENST00000585913 HIF3AQ9Y2N7 669 aa18.69■□□□□ 0.58
CIRBP-205ENST00000585913 SNX13Q9Y5W8 968 aa18.69■□□□□ 0.58
CIRBP-205ENST00000585913 CHD3Q12873 2000 aaKnown RBP18.68■□□□□ 0.58
CIRBP-205ENST00000585913 LOC390937A0A1W2PQ73 354 aa18.68■□□□□ 0.58
CIRBP-205ENST00000585913 NPIPB13A6NJU9 1138 aa18.68■□□□□ 0.58
CIRBP-205ENST00000585913 A8MV72 311 aaPredicted RBP18.68■□□□□ 0.58
CIRBP-205ENST00000585913 NPIPB4C9JG80 1138 aa18.68■□□□□ 0.58
CIRBP-205ENST00000585913 GLRXP35754 106 aa18.68■□□□□ 0.58
CIRBP-205ENST00000585913 VLDLRP98155 873 aa18.68■□□□□ 0.58
CIRBP-205ENST00000585913 CD47Q08722 323 aa18.68■□□□□ 0.58
CIRBP-205ENST00000585913 NRN1LQ496H8 165 aa18.68■□□□□ 0.58
CIRBP-205ENST00000585913 ARMC4Q5T2S8 1044 aa18.68■□□□□ 0.58
CIRBP-205ENST00000585913 SLC16A14Q7RTX9 510 aa18.68■□□□□ 0.58
CIRBP-205ENST00000585913 ZNF584Q8IVC4 421 aa18.68■□□□□ 0.58
CIRBP-205ENST00000585913 CDK20Q8IZL9 346 aa18.68■□□□□ 0.58
CIRBP-205ENST00000585913 NEU4Q8WWR8 484 aaPredicted RBP18.68■□□□□ 0.58
CIRBP-205ENST00000585913 MRPL24Q96A35 216 aaKnown RBP18.68■□□□□ 0.58
CIRBP-205ENST00000585913 HSH2DQ96JZ2 352 aa18.68■□□□□ 0.58
CIRBP-205ENST00000585913 TXNIPQ9H3M7 391 aa18.68■□□□□ 0.58
CIRBP-205ENST00000585913 SLC7A8Q9UHI5 535 aa18.68■□□□□ 0.58
CIRBP-205ENST00000585913 ABCA1O95477 2261 aa18.68■□□□□ 0.58
CIRBP-205ENST00000585913 NR2C1P13056 603 aa18.67■□□□□ 0.58
CIRBP-205ENST00000585913 NR4A2P43354 598 aa18.67■□□□□ 0.58
CIRBP-205ENST00000585913 PSME3P61289 254 aa18.67■□□□□ 0.58
CIRBP-205ENST00000585913 LSM11P83369 360 aaKnown RBP eCLIP18.67■□□□□ 0.584e-13■■□□□ 14.1
CIRBP-205ENST00000585913 TOP3AQ13472 1001 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms