RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 F8A1P23610 371 aa13.11□□□□□ -0.31
COMMD4-221ENST00000567935 CRABP1P29762 137 aa13.11□□□□□ -0.31
COMMD4-221ENST00000567935 ACVR1BP36896 505 aa13.11□□□□□ -0.31
COMMD4-221ENST00000567935 GBX2P52951 348 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-221ENST00000567935 RPS3AP61247 264 aaKnown RBP13.11□□□□□ -0.31
COMMD4-221ENST00000567935 ZNF85Q03923 595 aa13.11□□□□□ -0.31
COMMD4-221ENST00000567935 Q0VFX4 171 aa13.11□□□□□ -0.31
COMMD4-221ENST00000567935 AIMP2Q13155 320 aaKnown RBP13.11□□□□□ -0.31
COMMD4-221ENST00000567935 OR7A5Q15622 319 aa13.11□□□□□ -0.31
COMMD4-221ENST00000567935 CCDC58Q4VC31 144 aa13.11□□□□□ -0.31
COMMD4-221ENST00000567935 B3GLCTQ6Y288 498 aa13.11□□□□□ -0.31
COMMD4-221ENST00000567935 VASH1Q7L8A9 365 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-221ENST00000567935 ZBTB46Q86UZ6 589 aa13.11□□□□□ -0.31
COMMD4-221ENST00000567935 KLBQ86Z14 1044 aa13.11□□□□□ -0.31
COMMD4-221ENST00000567935 OR6Q1Q8NGQ2 317 aa13.11□□□□□ -0.31
COMMD4-221ENST00000567935 THAP4Q8WY91 577 aa13.11□□□□□ -0.31
COMMD4-221ENST00000567935 KIAA1143Q96AT1 154 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-221ENST00000567935 MARCH7Q9H992 704 aa13.11□□□□□ -0.31
COMMD4-221ENST00000567935 TXNL4BQ9NX01 149 aaKnown RBP13.11□□□□□ -0.31
COMMD4-221ENST00000567935 CRNNQ9UBG3 495 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-221ENST00000567935 RPH3AQ9Y2J0 694 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-221ENST00000567935 F8P00451 2351 aa13.11□□□□□ -0.31
COMMD4-221ENST00000567935 CPAMD8Q8IZJ3 1885 aa13.1□□□□□ -0.31
COMMD4-221ENST00000567935 LOC101059948A0A1B0GTJ6 334 aa13.1□□□□□ -0.31
COMMD4-221ENST00000567935 LOC102725191A0A1B0GVB3 256 aa13.1□□□□□ -0.31
COMMD4-221ENST00000567935 GJE1A6NN92 205 aa13.1□□□□□ -0.31
COMMD4-221ENST00000567935 NPIPA5E9PKD4 350 aa13.1□□□□□ -0.31
COMMD4-221ENST00000567935 C11orf98E9PRG8 122 aa13.1□□□□□ -0.31
COMMD4-221ENST00000567935 SERPINI2O75830 405 aa13.1□□□□□ -0.31
COMMD4-221ENST00000567935 TFP02787 698 aa13.1□□□□□ -0.31
COMMD4-221ENST00000567935 TACSTD2P09758 323 aa13.1□□□□□ -0.31
COMMD4-221ENST00000567935 DPP4P27487 766 aa13.1□□□□□ -0.31
COMMD4-221ENST00000567935 CYB561P49447 251 aa13.1□□□□□ -0.31
COMMD4-221ENST00000567935 RORCP51449 518 aa13.1□□□□□ -0.31
COMMD4-221ENST00000567935 RPS25P62851 125 aaKnown RBP13.1□□□□□ -0.31
COMMD4-221ENST00000567935 MYBPHQ13203 477 aa13.1□□□□□ -0.31
COMMD4-221ENST00000567935 CRTC2Q53ET0 693 aaPredicted RBP13.1□□□□□ -0.31
COMMD4-221ENST00000567935 TUBA3EQ6PEY2 450 aa13.1□□□□□ -0.31
COMMD4-221ENST00000567935 PLEKHG7Q6ZR37 379 aa13.1□□□□□ -0.31
COMMD4-221ENST00000567935 MS4A15Q8N5U1 240 aa13.1□□□□□ -0.31
COMMD4-221ENST00000567935 SNX33Q8WV41 574 aa13.1□□□□□ -0.31
COMMD4-221ENST00000567935 ARL5BQ96KC2 179 aa13.1□□□□□ -0.31
COMMD4-221ENST00000567935 C4orf36Q96KX1 117 aa13.1□□□□□ -0.31
COMMD4-221ENST00000567935 C5orf34Q96MH7 638 aa13.1□□□□□ -0.31
COMMD4-221ENST00000567935 TBX5Q99593 518 aa13.1□□□□□ -0.31
COMMD4-221ENST00000567935 TIMP4Q99727 224 aa13.1□□□□□ -0.31
COMMD4-221ENST00000567935 PROK2Q9HC23 129 aa13.1□□□□□ -0.31
COMMD4-221ENST00000567935 DKKL1Q9UK85 242 aa13.1□□□□□ -0.31
COMMD4-221ENST00000567935 NPIPA1Q9UND3 350 aa13.1□□□□□ -0.31
COMMD4-221ENST00000567935 MRPS18CQ9Y3D5 142 aaKnown RBP13.1□□□□□ -0.31
COMMD4-221ENST00000567935 HRH3Q9Y5N1 445 aa13.1□□□□□ -0.31
COMMD4-221ENST00000567935 PEX16Q9Y5Y5 336 aa13.1□□□□□ -0.31
COMMD4-221ENST00000567935 MS4A18H0YCH9 400 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 J3QLW9 94 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 RGS9O75916 674 aaPredicted RBP13.09□□□□□ -0.31
COMMD4-221ENST00000567935 PMS2P2O95744 297 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 CLDN1O95832 211 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 LALBAP00709 142 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 SERPINA3P01011 423 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 IMPDH2P12268 514 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 ZNF19P17023 458 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 SRD5A2P31213 254 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 S100A5P33763 92 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 CD79BP40259 229 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 ENTPD1P49961 510 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 BMXP51813 675 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 SLC35A1P78382 337 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 HSF1Q00613 529 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 RUNX1T1Q06455 604 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 ATP1A4Q13733 1029 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 MS4A18Q3C1V0 323 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 DCAF10Q5QP82 559 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 ABHD17BQ5VST6 288 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 PAMR1Q6UXH9 720 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 TIGD4Q8IY51 512 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 IL22RA1Q8N6P7 574 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 FNDC8Q8TC99 324 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 ZPLD1Q8TCW7 415 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 ASB10Q8WXI3 467 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 PSMF1Q92530 271 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 NKD1Q969G9 470 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 THOC3Q96J01 351 aaKnown RBP13.09□□□□□ -0.31
COMMD4-221ENST00000567935 KLHL15Q96M94 604 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 PIGQQ9BRB3 760 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 SYT4Q9H2B2 425 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 ISG20L2Q9H9L3 353 aaKnown RBP13.09□□□□□ -0.31
COMMD4-221ENST00000567935 SLC24A3Q9HC58 644 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 AKIP1Q9NQ31 210 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 B3GNT3Q9Y2A9 372 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 PMF1-BGLAPU3KQ54 211 aa13.09□□□□□ -0.31
COMMD4-221ENST00000567935 ARPC4-TTLL3A0A0A6YYG9 625 aa13.08□□□□□ -0.32
COMMD4-221ENST00000567935 SLC22A23A1A5C7 686 aa13.08□□□□□ -0.32
COMMD4-221ENST00000567935 H3BML4 177 aa13.08□□□□□ -0.32
COMMD4-221ENST00000567935 OGG1O15527 345 aa13.08□□□□□ -0.32
COMMD4-221ENST00000567935 DNPH1O43598 174 aa13.08□□□□□ -0.32
COMMD4-221ENST00000567935 EFNA2O43921 213 aa13.08□□□□□ -0.32
COMMD4-221ENST00000567935 GPRIN2O60269 458 aa13.08□□□□□ -0.32
COMMD4-221ENST00000567935 EIF1BO60739 113 aaKnown RBP13.08□□□□□ -0.32
COMMD4-221ENST00000567935 SULT1C4O75897 302 aa13.08□□□□□ -0.32
COMMD4-221ENST00000567935 NR2C1P13056 603 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms