RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 SMARCD3Q6STE5 483 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 ZNF620Q6ZNG0 422 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 HDDC2Q7Z4H3 204 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 TMEM200AQ86VY9 491 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 CLDN22Q8N7P3 220 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 FAM169BQ8N8A8 192 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 OR6N1Q8NGY5 312 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 LILRB1Q8NHL6 650 aaPredicted RBP10.84□□□□□ -0.67
RNF40-211ENST00000567365 IGFBPL1Q8WX77 278 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 NRGNQ92686 78 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 MUCL1Q96DR8 90 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 PIK3IP1Q96FE7 263 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 Q96M85 177 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 ZNF75AQ96N20 296 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 DGCR6LQ9BY27 220 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 OR52D1Q9H346 318 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 LIME1Q9H400 295 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 REEP1Q9H902 201 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 SMURF2Q9HAU4 748 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 IL20Q9NYY1 176 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 UGT2A1Q9Y4X1 527 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 U3KQV3 271 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 ZNF469Q96JG9 3925 aaPredicted RBP10.83□□□□□ -0.68
RNF40-211ENST00000567365 A0A096LPE4 126 aa10.83□□□□□ -0.68
RNF40-211ENST00000567365 A0A1W2PPZ6 126 aa10.83□□□□□ -0.68
RNF40-211ENST00000567365 ARPC3O15145 178 aa10.83□□□□□ -0.68
RNF40-211ENST00000567365 DHHO43323 396 aa10.83□□□□□ -0.68
RNF40-211ENST00000567365 CST1P01037 141 aa10.83□□□□□ -0.68
RNF40-211ENST00000567365 GASTP01350 101 aa10.83□□□□□ -0.68
RNF40-211ENST00000567365 IGKV3-15P01624 115 aa10.83□□□□□ -0.68
RNF40-211ENST00000567365 QDPRP09417 244 aa10.83□□□□□ -0.68
RNF40-211ENST00000567365 CDH2P19022 906 aaPredicted RBP10.83□□□□□ -0.68
RNF40-211ENST00000567365 ERFP50548 548 aa10.83□□□□□ -0.68
RNF40-211ENST00000567365 NR1H2P55055 460 aa10.83□□□□□ -0.68
RNF40-211ENST00000567365 BSPH1Q075Z2 132 aa10.83□□□□□ -0.68
RNF40-211ENST00000567365 C3orf36Q3SXR2 165 aa10.83□□□□□ -0.68
RNF40-211ENST00000567365 NRN1LQ496H8 165 aa10.83□□□□□ -0.68
RNF40-211ENST00000567365 GPR139Q6DWJ6 353 aa10.83□□□□□ -0.68
RNF40-211ENST00000567365 ADAM5Q6NVV9 412 aa10.83□□□□□ -0.68
RNF40-211ENST00000567365 CD300LDQ6UXZ3 194 aa10.83□□□□□ -0.68
RNF40-211ENST00000567365 DPY19L2P2Q6ZN68 376 aa10.83□□□□□ -0.68
RNF40-211ENST00000567365 FOXL2NBQ6ZUU3 175 aa10.83□□□□□ -0.68
RNF40-211ENST00000567365 SYT14Q8NB59 555 aa10.83□□□□□ -0.68
RNF40-211ENST00000567365 GNPDA2Q8TDQ7 276 aa10.83□□□□□ -0.68
RNF40-211ENST00000567365 FOXB1Q99853 325 aa10.83□□□□□ -0.68
RNF40-211ENST00000567365 HEATR1Q9H583 2144 aaKnown RBP10.83□□□□□ -0.68
RNF40-211ENST00000567365 NGBQ9NPG2 151 aa10.83□□□□□ -0.68
RNF40-211ENST00000567365 KRCC1Q9NPI7 259 aaPredicted RBP10.83□□□□□ -0.68
RNF40-211ENST00000567365 B3GAT2Q9NPZ5 323 aa10.83□□□□□ -0.68
RNF40-211ENST00000567365 ARMC1Q9NVT9 282 aa10.83□□□□□ -0.68
RNF40-211ENST00000567365 TMEM38BQ9NVV0 291 aa10.83□□□□□ -0.68
RNF40-211ENST00000567365 DNAJB9Q9UBS3 223 aa10.83□□□□□ -0.68
RNF40-211ENST00000567365 MAGED1Q9Y5V3 778 aaPredicted RBP10.83□□□□□ -0.68
RNF40-211ENST00000567365 SLC22A23A1A5C7 686 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 A6NIZ1 184 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 IMPA2O14732 288 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 AHCYL1O43865 530 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 SEC14L2O76054 403 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 CCNB2O95067 398 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 PAX7P23759 505 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 CD40P25942 277 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 SDHAP31040 664 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 ACVR1BP36896 505 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 CLRN1P58418 232 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 ACTR3P61158 418 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 RAP1BP61224 184 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 RAP1AP62834 184 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 FMODQ06828 376 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 TOP3AQ13472 1001 aaPredicted RBP10.82□□□□□ -0.68
RNF40-211ENST00000567365 THEM4Q5T1C6 240 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 C1orf146Q5VVC0 180 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 KLHL24Q6TFL4 600 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 ZNF704Q6ZNC4 412 aaPredicted RBP10.82□□□□□ -0.68
RNF40-211ENST00000567365 RASSF6Q6ZTQ3 369 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 YTHDF3Q7Z739 585 aaKnown RBP10.82□□□□□ -0.68
RNF40-211ENST00000567365 CCDC36Q8IYA8 594 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 AQP11Q8NBQ7 271 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 OR8D4Q8NGM9 314 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 FANK1Q8TC84 345 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 NABP1Q96AH0 204 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 SAMD8Q96LT4 415 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 ESRP2Q9H6T0 727 aaKnown RBP10.82□□□□□ -0.68
RNF40-211ENST00000567365 YY1AP1Q9H869 796 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 NOX3Q9HBY0 568 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 IL20RAQ9UHF4 553 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 MGAT4BQ9UQ53 548 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 CDH10Q9Y6N8 788 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 RTTNQ86VV8 2226 aa10.82□□□□□ -0.68
RNF40-211ENST00000567365 IGHV1-18A0A0C4DH31 117 aa10.81□□□□□ -0.68
RNF40-211ENST00000567365 PRSS37A4D1T9 235 aa10.81□□□□□ -0.68
RNF40-211ENST00000567365 SHISA9B4DS77 424 aa10.81□□□□□ -0.68
RNF40-211ENST00000567365 BHLHE40O14503 412 aa10.81□□□□□ -0.68
RNF40-211ENST00000567365 SLC2A10O95528 541 aa10.81□□□□□ -0.68
RNF40-211ENST00000567365 CBR1P16152 277 aa10.81□□□□□ -0.68
RNF40-211ENST00000567365 PTAFRP25105 342 aa10.81□□□□□ -0.68
RNF40-211ENST00000567365 RPL4P36578 427 aaKnown RBP10.81□□□□□ -0.68
RNF40-211ENST00000567365 ZNF83P51522 516 aa10.81□□□□□ -0.68
RNF40-211ENST00000567365 TUBA1BP68363 451 aa10.81□□□□□ -0.68
RNF40-211ENST00000567365 TUBA4AP68366 448 aa10.81□□□□□ -0.68
RNF40-211ENST00000567365 MRPS34P82930 218 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms