RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 OPN1LWP04000 364 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 CEACAM1P13688 526 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 S100A5P33763 92 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 CD96P40200 585 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 CASRP41180 1078 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 GLO1Q04760 184 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 SLC3A1Q07837 685 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 HSPB2Q16082 182 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 INAQ16352 499 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 HDDC2Q7Z4H3 204 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 WDFY1Q8IWB7 410 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 UEVLDQ8IX04 471 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 OR6N2Q8NGY6 317 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 NEIL3Q8TAT5 605 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 ABHD4Q8TB40 342 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 GHSRQ92847 366 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 RNF166Q96A37 237 aaPredicted RBP11.55□□□□□ -0.56
SNX1-211ENST00000560829 TXNDC15Q96J42 360 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 ADAD1Q96M93 576 aaKnown RBP11.55□□□□□ -0.56
SNX1-211ENST00000560829 OXGR1Q96P68 337 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 MRPL13Q9BYD1 178 aaKnown RBP11.55□□□□□ -0.56
SNX1-211ENST00000560829 TTTY10Q9BZA0 68 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 ZFP64Q9NPA5 681 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 MRPL22Q9NWU5 206 aaKnown RBP11.55□□□□□ -0.56
SNX1-211ENST00000560829 MED29Q9NX70 200 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 MRM2Q9UI43 246 aaKnown RBP11.55□□□□□ -0.56
SNX1-211ENST00000560829 LAMP5Q9UJQ1 280 aa11.55□□□□□ -0.56
SNX1-211ENST00000560829 CPAMD8Q8IZJ3 1885 aa11.54□□□□□ -0.56
SNX1-211ENST00000560829 CD8B2A6NJW9 211 aa11.54□□□□□ -0.56
SNX1-211ENST00000560829 GJE1A6NN92 205 aa11.54□□□□□ -0.56
SNX1-211ENST00000560829 ZNF814B7Z6K7 855 aa11.54□□□□□ -0.56
SNX1-211ENST00000560829 DNPH1O43598 174 aa11.54□□□□□ -0.56
SNX1-211ENST00000560829 GPRIN2O60269 458 aa11.54□□□□□ -0.56
SNX1-211ENST00000560829 EIF1BO60739 113 aaKnown RBP11.54□□□□□ -0.56
SNX1-211ENST00000560829 UPK3AO75631 287 aa11.54□□□□□ -0.56
SNX1-211ENST00000560829 SERPINA3P01011 423 aa11.54□□□□□ -0.56
SNX1-211ENST00000560829 TACSTD2P09758 323 aa11.54□□□□□ -0.56
SNX1-211ENST00000560829 CLEC2LP0C7M8 214 aa11.54□□□□□ -0.56
SNX1-211ENST00000560829 CD8BP10966 210 aa11.54□□□□□ -0.56
SNX1-211ENST00000560829 ITGA3P26006 1051 aa11.54□□□□□ -0.56
SNX1-211ENST00000560829 MTNR1BP49286 362 aa11.54□□□□□ -0.56
SNX1-211ENST00000560829 FOXO1Q12778 655 aa11.54□□□□□ -0.56
SNX1-211ENST00000560829 INSL4Q14641 139 aa11.54□□□□□ -0.56
SNX1-211ENST00000560829 ETFDHQ16134 617 aa11.54□□□□□ -0.56
SNX1-211ENST00000560829 DPY19L4Q7Z388 723 aa11.54□□□□□ -0.56
SNX1-211ENST00000560829 TEX19Q8NA77 164 aa11.54□□□□□ -0.56
SNX1-211ENST00000560829 CLEC1AQ8NC01 280 aa11.54□□□□□ -0.56
SNX1-211ENST00000560829 KCNE4Q8WWG9 221 aa11.54□□□□□ -0.56
SNX1-211ENST00000560829 ASB17Q8WXJ9 295 aa11.54□□□□□ -0.56
SNX1-211ENST00000560829 DTNBP1Q96EV8 351 aa11.54□□□□□ -0.56
SNX1-211ENST00000560829 UTP23Q9BRU9 249 aaKnown RBP11.54□□□□□ -0.56
SNX1-211ENST00000560829 MFRPQ9BY79 579 aa11.54□□□□□ -0.56
SNX1-211ENST00000560829 OR2B2Q9GZK3 357 aa11.54□□□□□ -0.56
SNX1-211ENST00000560829 CCDC86Q9H6F5 360 aaKnown RBP11.54□□□□□ -0.56
SNX1-211ENST00000560829 SMURF1Q9HCE7 757 aa11.54□□□□□ -0.56
SNX1-211ENST00000560829 PLEKHB1Q9UF11 243 aaPredicted RBP11.54□□□□□ -0.56
SNX1-211ENST00000560829 RASD1Q9Y272 281 aa11.54□□□□□ -0.56
SNX1-211ENST00000560829 MPDZO75970 2070 aa11.54□□□□□ -0.56
SNX1-211ENST00000560829 PCNX2A6NKB5 2137 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 SHISA3A0PJX4 238 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 GPANK1O95872 356 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 KRT8P05787 483 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 LIPCP11150 499 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 PSKH1P11801 424 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 CD40LGP29965 261 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 GDI2P50395 445 aaKnown RBP11.53□□□□□ -0.56
SNX1-211ENST00000560829 PPP5CP53041 499 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 BIDP55957 195 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 SOX8P57073 446 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 ZNF45Q02386 682 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 MXD1Q05195 221 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 HNRNPA0Q13151 305 aaKnown RBP11.53□□□□□ -0.56
SNX1-211ENST00000560829 PCK2Q16822 640 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 SPINK14Q6IE38 97 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 PAMR1Q6UXH9 720 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 TRILQ7L0X0 811 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 TMPRSS7Q7RTY8 843 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 FAM220AQ7Z4H9 259 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 CCDC190Q86UF4 302 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 OR6X1Q8NH79 312 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 FAM173AQ9BQD7 235 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 TPK1Q9H3S4 243 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 BOKQ9UMX3 212 aaPredicted RBP11.53□□□□□ -0.56
SNX1-211ENST00000560829 COA3Q9Y2R0 106 aaPredicted RBP11.53□□□□□ -0.56
SNX1-211ENST00000560829 TRBV2A0A0J9YWF9 115 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 SLC35F4A4IF30 521 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 PROB1E7EW31 1015 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 ZNF593O00488 134 aaPredicted RBP11.53□□□□□ -0.56
SNX1-211ENST00000560829 DVL2O14641 736 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 CASKO14936 926 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 KHDRBS3O75525 346 aaKnown RBP11.53□□□□□ -0.56
SNX1-211ENST00000560829 VAMP5O95183 116 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 HRGP04196 525 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 RFPL3SP0C7P2 107 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 EDNRAP25101 427 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 RPS11P62280 158 aaKnown RBP eCLIP11.53□□□□□ -0.56
SNX1-211ENST00000560829 CSNK2A1P68400 391 aaPredicted RBP11.53□□□□□ -0.56
SNX1-211ENST00000560829 ROM1Q03395 351 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 POU4F3Q15319 338 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 TGIF1Q15583 401 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms