RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 FAM220AQ7Z4H9 259 aa15.99■□□□□ 0.15
SNX1-208ENST00000559844 TIGD4Q8IY51 512 aa15.99■□□□□ 0.15
SNX1-208ENST00000559844 OR8H2Q8N162 312 aa15.99■□□□□ 0.15
SNX1-208ENST00000559844 SCAIQ8N9R8 606 aa15.99■□□□□ 0.15
SNX1-208ENST00000559844 ZNF511Q8NB15 262 aa15.99■□□□□ 0.15
SNX1-208ENST00000559844 MFSD8Q8NHS3 518 aa15.99■□□□□ 0.15
SNX1-208ENST00000559844 SETD6Q8TBK2 473 aa15.99■□□□□ 0.15
SNX1-208ENST00000559844 MRGPRX4Q96LA9 322 aa15.99■□□□□ 0.15
SNX1-208ENST00000559844 TSSK2Q96PF2 358 aa15.99■□□□□ 0.15
SNX1-208ENST00000559844 RASL10BQ96S79 203 aa15.99■□□□□ 0.15
SNX1-208ENST00000559844 OR11A1Q9GZK7 315 aa15.99■□□□□ 0.15
SNX1-208ENST00000559844 SRRQ9GZT4 340 aa15.99■□□□□ 0.15
SNX1-208ENST00000559844 RNF32Q9H0A6 362 aa15.99■□□□□ 0.15
SNX1-208ENST00000559844 POLE4Q9NR33 117 aa15.99■□□□□ 0.15
SNX1-208ENST00000559844 COMMD3Q9UBI1 195 aa15.99■□□□□ 0.15
SNX1-208ENST00000559844 FKBP7Q9Y680 259 aa15.99■□□□□ 0.15
SNX1-208ENST00000559844 CPAMD8Q8IZJ3 1885 aa15.99■□□□□ 0.15
SNX1-208ENST00000559844 MGAQ8IWI9 3026 aa15.99■□□□□ 0.15
SNX1-208ENST00000559844 A6NL46 340 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 TP53I11O14683 189 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 PHYHO14832 338 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 SLC19A2O60779 497 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 GATBO75879 557 aaKnown RBP15.98■□□□□ 0.15
SNX1-208ENST00000559844 WISP1O95388 367 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 PTGDSP41222 190 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 BLVRAP53004 296 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 ZP4Q12836 540 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 ACKR1Q16570 336 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 METAP1DQ6UB28 335 aaPredicted RBP15.98■□□□□ 0.15
SNX1-208ENST00000559844 CDC20BQ86Y33 519 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 OR6V1Q8N148 313 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 GALNT16Q8N428 558 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 GDPD1Q8N9F7 314 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 ZNF519Q8TB69 540 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 PHYHIPQ92561 330 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 KCTD12Q96CX2 325 aaKnown RBP15.98■□□□□ 0.15
SNX1-208ENST00000559844 ADAD1Q96M93 576 aaKnown RBP15.98■□□□□ 0.15
SNX1-208ENST00000559844 RYDENQ9NUL5 291 aaKnown RBP15.98■□□□□ 0.15
SNX1-208ENST00000559844 ACOXLQ9NUZ1 547 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 TMEM14AQ9Y6G1 99 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 TRBV2A0A0J9YWF9 115 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 A0A1W2PRG6 482 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 FAM47E-STBD1D6RA91 191 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 H7C1C5 153 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 ARL6IP5O75915 188 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 NCR1O76036 304 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 APOA1P02647 267 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 PTBP1P26599 531 aaKnown RBP eCLIP15.98■□□□□ 0.15
SNX1-208ENST00000559844 SHC1P29353 583 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 LCN6P62502 163 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 ZNF79Q15937 498 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 ZNF684Q5T5D7 378 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 HBMQ6B0K9 141 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 LYPD4Q6UWN0 246 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 OR10G3Q8NGC4 313 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 ZNF417Q8TAU3 575 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 KLHL15Q96M94 604 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 ZNF587Q96SQ5 575 aaPredicted RBP15.98■□□□□ 0.15
SNX1-208ENST00000559844 POTEKPQ9BYX7 375 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 SYT4Q9H2B2 425 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 MARCH7Q9H992 704 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 CNTRLQ7Z7A1 2325 aa15.98■□□□□ 0.15
SNX1-208ENST00000559844 TRAV1-2A0A0B4J238 106 aa15.97■□□□□ 0.15
SNX1-208ENST00000559844 PRSS37A4D1T9 235 aa15.97■□□□□ 0.15
SNX1-208ENST00000559844 DVL2O14641 736 aa15.97■□□□□ 0.15
SNX1-208ENST00000559844 MAGEB4O15481 346 aaPredicted RBP15.97■□□□□ 0.15
SNX1-208ENST00000559844 CCL11P51671 97 aa15.97■□□□□ 0.15
SNX1-208ENST00000559844 FOXF1Q12946 379 aa15.97■□□□□ 0.15
SNX1-208ENST00000559844 AGAP7PQ5VUJ5 663 aa15.97■□□□□ 0.15
SNX1-208ENST00000559844 JMJD6Q6NYC1 403 aaPredicted RBP15.97■□□□□ 0.15
SNX1-208ENST00000559844 PM20D2Q8IYS1 436 aa15.97■□□□□ 0.15
SNX1-208ENST00000559844 RPS4Y2Q8TD47 263 aa15.97■□□□□ 0.15
SNX1-208ENST00000559844 SNRNP27Q8WVK2 155 aaKnown RBP15.97■□□□□ 0.15
SNX1-208ENST00000559844 PSMF1Q92530 271 aa15.97■□□□□ 0.15
SNX1-208ENST00000559844 DNAJA3Q96EY1 480 aa15.97■□□□□ 0.15
SNX1-208ENST00000559844 TTYH2Q9BSA4 534 aa15.97■□□□□ 0.15
SNX1-208ENST00000559844 WDR76Q9H967 626 aa15.97■□□□□ 0.15
SNX1-208ENST00000559844 SERINC1Q9NRX5 453 aa15.97■□□□□ 0.15
SNX1-208ENST00000559844 VSX1Q9NZR4 365 aaPredicted RBP15.97■□□□□ 0.15
SNX1-208ENST00000559844 VDAC3Q9Y277 283 aa15.97■□□□□ 0.15
SNX1-208ENST00000559844 A6NIZ1 184 aa15.96■□□□□ 0.15
SNX1-208ENST00000559844 HSPB2A8KAH6 182 aa15.96■□□□□ 0.15
SNX1-208ENST00000559844 DCTN6O00399 190 aa15.96■□□□□ 0.15
SNX1-208ENST00000559844 RAP1BP61224 184 aa15.96■□□□□ 0.15
SNX1-208ENST00000559844 RAP1AP62834 184 aa15.96■□□□□ 0.15
SNX1-208ENST00000559844 SNTA1Q13424 505 aa15.96■□□□□ 0.15
SNX1-208ENST00000559844 HSPB2Q16082 182 aa15.96■□□□□ 0.15
SNX1-208ENST00000559844 ZMAT1Q5H9K5 638 aa15.96■□□□□ 0.15
SNX1-208ENST00000559844 B3GNTL1Q67FW5 361 aaPredicted RBP15.96■□□□□ 0.15
SNX1-208ENST00000559844 BICRALQ6AI39 1079 aa15.96■□□□□ 0.15
SNX1-208ENST00000559844 OPN5Q6U736 354 aa15.96■□□□□ 0.15
SNX1-208ENST00000559844 ARSKQ6UWY0 536 aa15.96■□□□□ 0.15
SNX1-208ENST00000559844 TRILQ7L0X0 811 aa15.96■□□□□ 0.15
SNX1-208ENST00000559844 INTS14Q96SY0 518 aa15.96■□□□□ 0.15
SNX1-208ENST00000559844 LAMP5Q9UJQ1 280 aa15.96■□□□□ 0.15
SNX1-208ENST00000559844 ZZEF1O43149 2961 aa15.96■□□□□ 0.15
SNX1-208ENST00000559844 TMCC2O75069 709 aa15.96■□□□□ 0.15
SNX1-208ENST00000559844 PLGP00747 810 aaPredicted RBP15.96■□□□□ 0.15
SNX1-208ENST00000559844 HNRNPCP07910 306 aaKnown RBP eCLIP15.96■□□□□ 0.15
SNX1-208ENST00000559844 CASP3P42574 277 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms