RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 SOX6P35712 828 aa9.72□□□□□ -0.85
PFDN5-216ENST00000552341 DNASE1L1P49184 302 aa9.72□□□□□ -0.85
PFDN5-216ENST00000552341 SIRPAP78324 504 aa9.72□□□□□ -0.85
PFDN5-216ENST00000552341 GABREP78334 506 aa9.72□□□□□ -0.85
PFDN5-216ENST00000552341 IFITM3Q01628 133 aa9.72□□□□□ -0.85
PFDN5-216ENST00000552341 CAMK2BQ13554 666 aa9.72□□□□□ -0.85
PFDN5-216ENST00000552341 ETFDHQ16134 617 aa9.72□□□□□ -0.85
PFDN5-216ENST00000552341 TMEM176BQ3YBM2 270 aaPredicted RBP9.72□□□□□ -0.85
PFDN5-216ENST00000552341 TMPRSS12Q86WS5 348 aa9.72□□□□□ -0.85
PFDN5-216ENST00000552341 RAB43Q86YS6 212 aa9.72□□□□□ -0.85
PFDN5-216ENST00000552341 ZNF248Q8NDW4 579 aa9.72□□□□□ -0.85
PFDN5-216ENST00000552341 SNX33Q8WV41 574 aa9.72□□□□□ -0.85
PFDN5-216ENST00000552341 MIB2Q96AX9 1013 aa9.72□□□□□ -0.85
PFDN5-216ENST00000552341 OR5B2Q96R09 309 aa9.72□□□□□ -0.85
PFDN5-216ENST00000552341 C6orf62Q9GZU0 229 aaPredicted RBP9.72□□□□□ -0.85
PFDN5-216ENST00000552341 TSPAN10Q9H1Z9 355 aaPredicted RBP9.72□□□□□ -0.85
PFDN5-216ENST00000552341 ACOXLQ9NUZ1 547 aa9.72□□□□□ -0.85
PFDN5-216ENST00000552341 MRPL22Q9NWU5 206 aaKnown RBP9.72□□□□□ -0.85
PFDN5-216ENST00000552341 PLEKHB1Q9UF11 243 aaPredicted RBP9.72□□□□□ -0.85
PFDN5-216ENST00000552341 POLHQ9Y253 713 aa9.72□□□□□ -0.85
PFDN5-216ENST00000552341 TRAPPC4Q9Y296 219 aa9.72□□□□□ -0.85
PFDN5-216ENST00000552341 RPH3AQ9Y2J0 694 aaPredicted RBP9.72□□□□□ -0.85
PFDN5-216ENST00000552341 HDGFL3Q9Y3E1 203 aa9.72□□□□□ -0.85
PFDN5-216ENST00000552341 MED13Q9UHV7 2174 aa9.71□□□□□ -0.85
PFDN5-216ENST00000552341 OR2M5A3KFT3 312 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 LRRC3CA6NJW4 275 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 CD8B2A6NJW9 211 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 CTDSP2O14595 271 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 TM4SF5O14894 197 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 ABHD16AO95870 558 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 CD8BP10966 210 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 KLK2P20151 261 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 ALOX5APP20292 161 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 GTF2E2P29084 291 aaKnown RBP9.71□□□□□ -0.86
PFDN5-216ENST00000552341 CD40LGP29965 261 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 SFTPDP35247 375 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 PTGS2P35354 604 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 RPS27P42677 84 aaKnown RBP9.71□□□□□ -0.86
PFDN5-216ENST00000552341 CYB561P49447 251 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 RORCP51449 518 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 B3GALT5-AS1P59052 145 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 H3F3AP84243 136 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 POU3F1Q03052 451 aaPredicted RBP9.71□□□□□ -0.86
PFDN5-216ENST00000552341 MXD1Q05195 221 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 CCDC58Q4VC31 144 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 ARL9Q6T311 187 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 SLC35D2Q76EJ3 337 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 DPY19L4Q7Z388 723 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 GHSRQ92847 366 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 PRRX2Q99811 253 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 ASCL3Q9NQ33 180 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 SACM1LQ9NTJ5 587 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 MED29Q9NX70 200 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 STMN3Q9NZ72 180 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 KLHL13Q9P2N7 655 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 GSTK1Q9Y2Q3 226 aa9.71□□□□□ -0.86
PFDN5-216ENST00000552341 MUC6Q6W4X9 2439 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 A6NIZ1 184 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 SLC16A7O60669 478 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 RAMP1O60894 148 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 UPK3AO75631 287 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 RGS9O75916 674 aaPredicted RBP9.7□□□□□ -0.86
PFDN5-216ENST00000552341 NEURL1O76050 574 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 P04436 131 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 CD1AP06126 327 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 RFPL3SP0C7P2 107 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 ZNF17P17021 662 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 CD96P40200 585 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 ETV6P41212 452 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 DAP3P51398 398 aaKnown RBP9.7□□□□□ -0.86
PFDN5-216ENST00000552341 PPP5CP53041 499 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 ARPC4P59998 168 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 NANOS3P60323 173 aaKnown RBP9.7□□□□□ -0.86
PFDN5-216ENST00000552341 RAP1BP61224 184 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 RPS11P62280 158 aaKnown RBP eCLIP9.7□□□□□ -0.86
PFDN5-216ENST00000552341 RAP1AP62834 184 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 SLC3A1Q07837 685 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 FOXO1Q12778 655 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 CDK5R1Q15078 307 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 TGIF1Q15583 401 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 RPL22L1Q6P5R6 122 aaKnown RBP9.7□□□□□ -0.86
PFDN5-216ENST00000552341 TUBA3EQ6PEY2 450 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 TMPPEQ6ZT21 453 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 NEIL3Q8TAT5 605 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 SLC39A7Q92504 469 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 SMIM19Q96E16 107 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 JSRP1Q96MG2 331 aaPredicted RBP9.7□□□□□ -0.86
PFDN5-216ENST00000552341 INTS14Q96SY0 518 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 MNTQ99583 582 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 KCNS3Q9BQ31 491 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 MRPL13Q9BYD1 178 aaKnown RBP9.7□□□□□ -0.86
PFDN5-216ENST00000552341 MRM2Q9UI43 246 aaKnown RBP9.7□□□□□ -0.86
PFDN5-216ENST00000552341 GNG8Q9UK08 70 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 LOC400499M0QZD8 3231 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 IGKV1D-43A0A0B4J1Z2 117 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 LOC102725191A0A1B0GVB3 256 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 IQCMA0A1B0GVH7 501 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 NPIPA5E9PKD4 350 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 PSMD9O00233 223 aa9.7□□□□□ -0.86
PFDN5-216ENST00000552341 TRAF3IP2O43734 574 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms