RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 DNASE1P24855 282 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 GRPRP30550 384 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 PPICP45877 212 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 ART1P52961 327 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 EGR4Q05215 589 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 SHBQ15464 509 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 HSPB2Q16082 182 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 METTL11BQ5VVY1 283 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 OLFML2AQ68BL7 652 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 SFRP4Q6FHJ7 346 aaPredicted RBP13.18□□□□□ -0.3
CDCA3-207ENST00000538862 LRRN1Q6UXK5 716 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 PARGQ86W56 976 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 OR6V1Q8N148 313 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 ZNF680Q8NEM1 530 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 BEST4Q8NFU0 473 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 OR2T4Q8NH00 348 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 FAM174AQ8TBP5 190 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 PHOSPHO1Q8TCT1 267 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 MIB2Q96AX9 1013 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 DACT3Q96B18 629 aaPredicted RBP13.18□□□□□ -0.3
CDCA3-207ENST00000538862 KLHDC7BQ96G42 594 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 MS4A3Q96HJ5 214 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 ELF4Q99607 663 aaPredicted RBP13.18□□□□□ -0.3
CDCA3-207ENST00000538862 ZNF436Q9C0F3 470 aaPredicted RBP13.18□□□□□ -0.3
CDCA3-207ENST00000538862 SPRTNQ9H040 489 aaPredicted RBP13.18□□□□□ -0.3
CDCA3-207ENST00000538862 TSPAN10Q9H1Z9 355 aaPredicted RBP13.18□□□□□ -0.3
CDCA3-207ENST00000538862 UCK1Q9HA47 277 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 GRHPRQ9UBQ7 328 aa13.18□□□□□ -0.3
CDCA3-207ENST00000538862 ANKRD20A5PA0PJZ0 165 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 LEUTXA8MZ59 168 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 SERPINI2O75830 405 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 OR8G3PP0DMU2 310 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 SPTBP11277 2137 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 CEACAM1P13688 526 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 MAGEB1P43366 347 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 CAPZBP47756 277 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 FASLGP48023 281 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 EPHA4P54764 986 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 LTBQ06643 244 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 EGR3Q06889 387 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 TCTE1Q5JU00 501 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 TMEM69Q5SWH9 247 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 NUP210LQ5VU65 1888 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 GPR139Q6DWJ6 353 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 DND1Q8IYX4 353 aaKnown RBP13.17□□□□□ -0.3
CDCA3-207ENST00000538862 GATSQ8NAP1 163 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 LILRB1Q8NHL6 650 aaPredicted RBP13.17□□□□□ -0.3
CDCA3-207ENST00000538862 NXPE2Q96DL1 559 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 TSSK2Q96PF2 358 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 LPAR4Q99677 370 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 LRRC61Q9BV99 259 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 FRRS1LQ9P0K9 344 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 KLHDC2Q9Y2U9 406 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 ARPC4-TTLL3A0A0A6YYG9 625 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 C17orf105B2RV13 164 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 ACOT7O00154 380 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 OIP5O43482 229 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 SDC3O75056 442 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 KHDRBS3O75525 346 aaKnown RBP13.17□□□□□ -0.3
CDCA3-207ENST00000538862 RPP14O95059 124 aaKnown RBP13.17□□□□□ -0.3
CDCA3-207ENST00000538862 HPXP02790 462 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 PROS1P07225 676 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 ZNF883P0CG24 379 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 CCR4P51679 360 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 MAZP56270 477 aaKnown RBP13.17□□□□□ -0.3
CDCA3-207ENST00000538862 SLC37A1P57057 533 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 ZP1P60852 638 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 RPL18Q07020 188 aaKnown RBP13.17□□□□□ -0.3
CDCA3-207ENST00000538862 LGALSLQ3ZCW2 172 aaPredicted RBP13.17□□□□□ -0.3
CDCA3-207ENST00000538862 CBLN3Q6UW01 205 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 LRRTM1Q86UE6 522 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 MARVELD3Q96A59 401 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 LCORQ96JN0 433 aaPredicted RBP13.17□□□□□ -0.3
CDCA3-207ENST00000538862 KLHL15Q96M94 604 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 SLC46A1Q96NT5 459 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 LMF1Q96S06 567 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 UTP23Q9BRU9 249 aaKnown RBP13.17□□□□□ -0.3
CDCA3-207ENST00000538862 ADAM19Q9H013 955 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 WDR76Q9H967 626 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 SRA1Q9HD15 236 aaKnown RBP13.17□□□□□ -0.3
CDCA3-207ENST00000538862 NPDC1Q9NQX5 325 aaPredicted RBP13.17□□□□□ -0.3
CDCA3-207ENST00000538862 NKIRAS2Q9NYR9 191 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 LAMP5Q9UJQ1 280 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 MRTO4Q9UKD2 239 aaKnown RBP13.17□□□□□ -0.3
CDCA3-207ENST00000538862 AUP1Q9Y679 476 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 TMEM14AQ9Y6G1 99 aa13.17□□□□□ -0.3
CDCA3-207ENST00000538862 FITM1A5D6W6 292 aa13.16□□□□□ -0.3
CDCA3-207ENST00000538862 PHYHO14832 338 aa13.16□□□□□ -0.3
CDCA3-207ENST00000538862 SNAPC5O75971 98 aa13.16□□□□□ -0.3
CDCA3-207ENST00000538862 UTS2O95399 124 aa13.16□□□□□ -0.3
CDCA3-207ENST00000538862 RENP00797 406 aa13.16□□□□□ -0.3
CDCA3-207ENST00000538862 F13BP05160 661 aa13.16□□□□□ -0.3
CDCA3-207ENST00000538862 LCN1P31025 176 aa13.16□□□□□ -0.3
CDCA3-207ENST00000538862 P2RX1P51575 399 aa13.16□□□□□ -0.3
CDCA3-207ENST00000538862 CLDN12P56749 244 aa13.16□□□□□ -0.3
CDCA3-207ENST00000538862 GRM7Q14831 915 aa13.16□□□□□ -0.3
CDCA3-207ENST00000538862 APOOLQ6UXV4 268 aa13.16□□□□□ -0.3
CDCA3-207ENST00000538862 DNM1P46Q6ZS02 220 aa13.16□□□□□ -0.3
CDCA3-207ENST00000538862 SERPINA12Q8IW75 414 aa13.16□□□□□ -0.3
CDCA3-207ENST00000538862 SPICQ8N5J4 248 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms