RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 SNRPNP63162 240 aaKnown RBP9.28□□□□□ -0.92
SPIDR-224ENST00000524126 ST3GAL3Q11203 375 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 CRMP1Q14194 572 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 SLC9A5Q14940 896 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 AMZ1Q400G9 498 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 ZNF311Q5JNZ3 666 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 ATPAF1Q5TC12 328 aaPredicted RBP9.28□□□□□ -0.92
SPIDR-224ENST00000524126 NKAIN2Q5VXU1 208 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 STEAP1BQ6NZ63 245 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 ZNF836Q6ZNA1 936 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 GDF7Q7Z4P5 450 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 BIVMQ86UB2 503 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 GALNT16Q8N428 558 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 FRMD1Q8N878 549 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 OR4K17Q8NGC6 315 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 CCDC107Q8WV48 283 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 RAB40AQ8WXH6 277 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 ARSGQ96EG1 525 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 MOGAT1Q96PD6 335 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 RAB33BQ9H082 229 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 RHBGQ9H310 441 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.28□□□□□ -0.92
SPIDR-224ENST00000524126 MSGN1A6NI15 193 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 BHLHE40O14503 412 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 F10P00742 488 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 DCNP07585 359 aaKnown RBP9.28□□□□□ -0.92
SPIDR-224ENST00000524126 GALTP07902 379 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 SFTPBP07988 381 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 SOD3P08294 240 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 ADRA2CP18825 462 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 PPP2R1BP30154 601 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 NTSP30990 170 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 GJA4P35212 333 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 ZNF84P51523 738 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 PCBP4P57723 403 aaKnown RBP9.28□□□□□ -0.92
SPIDR-224ENST00000524126 SIRPAP78324 504 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 RPP30P78346 268 aaKnown RBP9.28□□□□□ -0.92
SPIDR-224ENST00000524126 LTBQ06643 244 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 ZNF177Q13360 481 aaPredicted RBP9.28□□□□□ -0.92
SPIDR-224ENST00000524126 SCGB2B2Q4G0G5 96 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 CTXN3Q4LDR2 81 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 KHDC3LQ587J8 217 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 DNM1P46Q6ZS02 220 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 SPRED2Q7Z698 418 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 TMPRSS12Q86WS5 348 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 DND1Q8IYX4 353 aaKnown RBP9.28□□□□□ -0.92
SPIDR-224ENST00000524126 CARFQ8N187 725 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 PRR18Q8N4B5 295 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 BHLHE23Q8NDY6 225 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 PFN4Q8NHR9 129 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 WFIKKN2Q8TEU8 576 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 MAFIPQ8WZ33 124 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 GAL3ST3Q96A11 431 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 ZBTB8AQ96BR9 441 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 MALSU1Q96EH3 234 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 PARP12Q9H0J9 701 aaKnown RBP9.28□□□□□ -0.92
SPIDR-224ENST00000524126 ATG5Q9H1Y0 275 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 RIMS4Q9H426 269 aaPredicted RBP9.28□□□□□ -0.92
SPIDR-224ENST00000524126 SIRT7Q9NRC8 400 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 INPP5EQ9NRR6 644 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 TMEM184BQ9Y519 407 aaPredicted RBP9.28□□□□□ -0.92
SPIDR-224ENST00000524126 MMP24Q9Y5R2 645 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 PRUNE2Q8WUY3 3088 aa9.28□□□□□ -0.92
SPIDR-224ENST00000524126 COL4A6Q14031 1691 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 TRAV18A0A075B6X5 111 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.27□□□□□ -0.93
SPIDR-224ENST00000524126 SLC22A31A6NKX4 558 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 H7BY64 318 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 NPC1O15118 1278 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 SLC16A5O15375 505 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 LRP3O75074 770 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 FBXO24O75426 580 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 PAPLNO95428 1278 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 FCGR3AP08637 254 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 ITGA5P08648 1049 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 OR8U9P0C7N5 309 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 MAKP20794 623 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 TEAD1P28347 426 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 SOX2P48431 317 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 CLDN2P57739 230 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 MBOAT2Q6ZWT7 520 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 KCTD9Q7L273 389 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 ANGPTL5Q86XS5 388 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 C19orf47Q8N9M1 422 aaKnown RBP9.27□□□□□ -0.93
SPIDR-224ENST00000524126 OR8U1Q8NH10 309 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 OR6X1Q8NH79 312 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 CASTOR1Q8WTX7 329 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 TFGQ92734 400 aaPredicted RBP9.27□□□□□ -0.93
SPIDR-224ENST00000524126 SLC41A3Q96GZ6 507 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 SEPT5Q99719 369 aaPredicted RBP9.27□□□□□ -0.93
SPIDR-224ENST00000524126 METTL9Q9H1A3 318 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 FBXO44Q9H4M3 255 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 RGCCQ9H4X1 137 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 PTGES2Q9H7Z7 377 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 SPACA1Q9HBV2 294 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 CRLF2Q9HC73 371 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 ZCCHC3Q9NUD5 404 aaKnown RBP9.27□□□□□ -0.93
SPIDR-224ENST00000524126 SLC7A7Q9UM01 511 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 PCDHB8Q9UN66 801 aa9.27□□□□□ -0.93
SPIDR-224ENST00000524126 C13orf42A0A1B0GVH6 325 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms