RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 AQP2P41181 271 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 NR4A2P43354 598 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 PDLIM4P50479 330 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 LSM11P83369 360 aaKnown RBP eCLIP10.67□□□□□ -0.72e-28■■□□□ 11.6
VEGFA-223ENST00000523125 RAB39AQ14964 217 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 LAPTM4AQ15012 233 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 FXNQ16595 210 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 SPATA21Q7Z572 469 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 TREML1Q86YW5 311 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 CDK20Q8IZL9 346 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 MOSPD2Q8NHP6 518 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 ASB10Q8WXI3 467 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 MCHR2Q969V1 340 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 SGTBQ96EQ0 304 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 TPD52L3Q96J77 140 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 ZNF347Q96SE7 839 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 SH3GL3Q99963 347 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 MED4Q9NPJ6 270 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 SNX13Q9Y5W8 968 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 COL6A5A8TX70 2615 aa10.67□□□□□ -0.7
VEGFA-223ENST00000523125 A0A1W2PRG6 482 aa10.66□□□□□ -0.7
VEGFA-223ENST00000523125 SH3PXD2BA1X283 911 aa10.66□□□□□ -0.7
VEGFA-223ENST00000523125 VSTM5A8MXK1 200 aa10.66□□□□□ -0.7
VEGFA-223ENST00000523125 NME4O00746 187 aa10.66□□□□□ -0.7
VEGFA-223ENST00000523125 FFAR1O14842 300 aa10.66□□□□□ -0.7
VEGFA-223ENST00000523125 TRMUO75648 421 aaKnown RBP10.66□□□□□ -0.7
VEGFA-223ENST00000523125 RAB36O95755 333 aa10.66□□□□□ -0.7
VEGFA-223ENST00000523125 IGHG1P01857 330 aa10.66□□□□□ -0.7
VEGFA-223ENST00000523125 SERPINA5P05154 406 aa10.66□□□□□ -0.7
VEGFA-223ENST00000523125 IGHV4-31P0DP07 118 aa10.66□□□□□ -0.7
VEGFA-223ENST00000523125 ACADSP16219 412 aa10.66□□□□□ -0.7
VEGFA-223ENST00000523125 GLRXP35754 106 aa10.66□□□□□ -0.7
VEGFA-223ENST00000523125 ZNF133P52736 654 aaPredicted RBP10.66□□□□□ -0.7
VEGFA-223ENST00000523125 MYBPC1Q00872 1141 aa10.66□□□□□ -0.7
VEGFA-223ENST00000523125 LIPEQ05469 1076 aa10.66□□□□□ -0.7
VEGFA-223ENST00000523125 FHL1Q13642 323 aa10.66□□□□□ -0.7
VEGFA-223ENST00000523125 HSP90B2PQ58FF3 399 aa10.66□□□□□ -0.7
VEGFA-223ENST00000523125 ARMC4Q5T2S8 1044 aa10.66□□□□□ -0.7
VEGFA-223ENST00000523125 VTCN1Q7Z7D3 282 aa10.66□□□□□ -0.7
VEGFA-223ENST00000523125 SYT14Q8NB59 555 aa10.66□□□□□ -0.7
VEGFA-223ENST00000523125 MRPL24Q96A35 216 aaKnown RBP10.66□□□□□ -0.7
VEGFA-223ENST00000523125 NMD3Q96D46 503 aaKnown RBP10.66□□□□□ -0.7
VEGFA-223ENST00000523125 PRRC1Q96M27 445 aa10.66□□□□□ -0.7
VEGFA-223ENST00000523125 MRPL37Q9BZE1 423 aaKnown RBP10.66□□□□□ -0.7
VEGFA-223ENST00000523125 RAB1BQ9H0U4 201 aa10.66□□□□□ -0.7
VEGFA-223ENST00000523125 MYOZ1Q9NP98 299 aaPredicted RBP10.66□□□□□ -0.7
VEGFA-223ENST00000523125 INIPQ9NRY2 104 aa10.66□□□□□ -0.7
VEGFA-223ENST00000523125 MAN2C1Q9NTJ4 1040 aa10.66□□□□□ -0.7
VEGFA-223ENST00000523125 FBXO9Q9UK97 447 aaPredicted RBP10.66□□□□□ -0.7
VEGFA-223ENST00000523125 MED31Q9Y3C7 131 aa10.66□□□□□ -0.7
VEGFA-223ENST00000523125 CMAHPQ9Y471 501 aa10.66□□□□□ -0.7
VEGFA-223ENST00000523125 IGHV4-61A0A0C4DH41 118 aa10.65□□□□□ -0.7
VEGFA-223ENST00000523125 NPIPB13A6NJU9 1138 aa10.65□□□□□ -0.7
VEGFA-223ENST00000523125 CENPBD1B2RD01 187 aa10.65□□□□□ -0.7
VEGFA-223ENST00000523125 NPIPB4C9JG80 1138 aa10.65□□□□□ -0.7
VEGFA-223ENST00000523125 J3KTA2 159 aa10.65□□□□□ -0.7
VEGFA-223ENST00000523125 CCDC22O60826 627 aa10.65□□□□□ -0.7
VEGFA-223ENST00000523125 ADRA2AP08913 450 aa10.65□□□□□ -0.7
VEGFA-223ENST00000523125 GIFP27352 417 aa10.65□□□□□ -0.7
VEGFA-223ENST00000523125 EVX1P49640 407 aa10.65□□□□□ -0.7
VEGFA-223ENST00000523125 CLRN1P58418 232 aa10.65□□□□□ -0.7
VEGFA-223ENST00000523125 ST3GAL3Q11203 375 aa10.65□□□□□ -0.7
VEGFA-223ENST00000523125 GGTLC2Q14390 218 aa10.65□□□□□ -0.7
VEGFA-223ENST00000523125 C10orf128Q5T292 105 aa10.65□□□□□ -0.7
VEGFA-223ENST00000523125 CYB5R2Q6BCY4 276 aa10.65□□□□□ -0.7
VEGFA-223ENST00000523125 ARPINQ7Z6K5 226 aa10.65□□□□□ -0.7
VEGFA-223ENST00000523125 LRP11Q86VZ4 500 aa10.65□□□□□ -0.7
VEGFA-223ENST00000523125 MEX3DQ86XN8 651 aaKnown RBP10.65□□□□□ -0.7
VEGFA-223ENST00000523125 PAQR4Q8N4S7 273 aaPredicted RBP10.65□□□□□ -0.7
VEGFA-223ENST00000523125 NOXO1Q8NFA2 376 aa10.65□□□□□ -0.7
VEGFA-223ENST00000523125 OR4K5Q8NGD3 323 aa10.65□□□□□ -0.7
VEGFA-223ENST00000523125 NEU4Q8WWR8 484 aaPredicted RBP10.65□□□□□ -0.7
VEGFA-223ENST00000523125 HOPXQ9BPY8 73 aaPredicted RBP10.65□□□□□ -0.7
VEGFA-223ENST00000523125 PIMREGQ9BSJ6 248 aa10.65□□□□□ -0.7
VEGFA-223ENST00000523125 FBXL3Q9UKT7 428 aa10.65□□□□□ -0.7
VEGFA-223ENST00000523125 HIF3AQ9Y2N7 669 aa10.65□□□□□ -0.7
VEGFA-223ENST00000523125 AP3M1Q9Y2T2 418 aa10.65□□□□□ -0.7
VEGFA-223ENST00000523125 UGT2A1Q9Y4X1 527 aa10.65□□□□□ -0.7
VEGFA-223ENST00000523125 IGKV1D-43A0A0B4J1Z2 117 aa10.64□□□□□ -0.71
VEGFA-223ENST00000523125 CXCR6O00574 342 aa10.64□□□□□ -0.71
VEGFA-223ENST00000523125 SYNGR3O43761 229 aa10.64□□□□□ -0.71
VEGFA-223ENST00000523125 PRSS23O95084 383 aa10.64□□□□□ -0.71
VEGFA-223ENST00000523125 STAMBPO95630 424 aa10.64□□□□□ -0.71
VEGFA-223ENST00000523125 MMP7P09237 267 aaPredicted RBP10.64□□□□□ -0.71
VEGFA-223ENST00000523125 DAOP14920 347 aa10.64□□□□□ -0.71
VEGFA-223ENST00000523125 MAKP20794 623 aa10.64□□□□□ -0.71
VEGFA-223ENST00000523125 YAP1P46937 504 aaKnown RBP10.64□□□□□ -0.71
VEGFA-223ENST00000523125 GSK3BP49841 420 aa10.64□□□□□ -0.71
VEGFA-223ENST00000523125 DAP3P51398 398 aaKnown RBP10.64□□□□□ -0.71
VEGFA-223ENST00000523125 SLC7A2P52569 658 aa10.64□□□□□ -0.71
VEGFA-223ENST00000523125 CARTPTQ16568 116 aa10.64□□□□□ -0.71
VEGFA-223ENST00000523125 NRN1LQ496H8 165 aa10.64□□□□□ -0.71
VEGFA-223ENST00000523125 HACD2Q6Y1H2 254 aa10.64□□□□□ -0.71
VEGFA-223ENST00000523125 CBLL1Q75N03 491 aa10.64□□□□□ -0.71
VEGFA-223ENST00000523125 TSEN54Q7Z6J9 526 aaKnown RBP10.64□□□□□ -0.71
VEGFA-223ENST00000523125 OFCC1Q8IZS5 231 aa10.64□□□□□ -0.71
VEGFA-223ENST00000523125 ZNF786Q8N393 782 aa10.64□□□□□ -0.71
VEGFA-223ENST00000523125 LZICQ8WZA0 190 aa10.64□□□□□ -0.71
VEGFA-223ENST00000523125 HDAC2Q92769 488 aaKnown RBP10.64□□□□□ -0.71
VEGFA-223ENST00000523125 BPIFA2Q96DR5 249 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms