RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 SLC13A4Q9UKG4 626 aa-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 BIRC6Q9NR09 4857 aa-2.43□□□□□ -2.8
RNU6-539P-201ENST00000516665 BAZ1BQ9UIG0 1483 aaKnown RBP-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 A0A087X0K7 114 aa-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 A0A1B0GTI1 187 aa-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 H3BMQ9 156 aa-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 DDX39AO00148 427 aaKnown RBP-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 PEX14O75381 377 aa-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 REM1O75628 298 aa-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 IGHV3-53P01767 116 aa-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 MYL1P05976 194 aa-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 PYGLP06737 847 aa-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 GCH1P30793 250 aa-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 CSE1LP55060 971 aaKnown RBP-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 KCNK10P57789 538 aa-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 IRF8Q02556 426 aa-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 KLHL38Q2WGJ6 581 aa-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 ALFQ53S48 1182 aa-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 ANKRD20A8PQ5CZ79 823 aa-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 LEG1Q6P5S2 330 aa-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 OR5C1Q8NGR4 320 aa-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 PRPF31Q8WWY3 499 aaKnown RBP-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 GEMIN6Q8WXD5 167 aaKnown RBP-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 ULK4Q96C45 1275 aa-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 TRIB3Q96RU7 358 aa-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 RSG1Q9BU20 258 aa-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 IDI2Q9BXS1 227 aa-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 FN3KRPQ9HA64 309 aa-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 GLRX2Q9NS18 164 aa-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 GALPQ9UBC7 116 aa-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 SLC23A2Q9UGH3 650 aa-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 HSPE1-MOB4S4R3N1 261 aa-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 HECTD1Q9ULT8 2610 aa-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 LCTP09848 1927 aa-2.44□□□□□ -2.8
RNU6-539P-201ENST00000516665 SNRNP200O75643 2136 aaKnown RBP-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 CLRN2A0PK11 232 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 VSTM2BA6NLU5 285 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 ADAM20O43506 726 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 PALMO75781 387 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 CHRNGP07510 517 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 XRCC1P18887 633 aaPredicted RBP-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 PSMA3P25788 255 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 SSTR5P35346 364 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 FRKP42685 505 aaPredicted RBP-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 GEMP55040 296 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 RPS21P63220 83 aaKnown RBP-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 NNATQ16517 81 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 ZSCAN26Q16670 478 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 C12orf74Q32Q52 190 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 ANKRD20A4Q4UJ75 823 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 LUZP6Q538Z0 58 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 SOHLH1Q5JUK2 328 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 ANKRD20A2Q5SQ80 823 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 ANKRD20A1Q5TYW2 823 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 ANKRD20A3Q5VUR7 823 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 SLC39A4Q6P5W5 647 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 ARL9Q6T311 187 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 TMEM182Q6ZP80 229 aaPredicted RBP-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 EXOC3-AS1Q8N2X6 119 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 CENPSQ8N2Z9 138 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 ZADH2Q8N4Q0 377 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 PIFOQ8TCI5 191 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 RNASE8Q8TDE3 154 aaKnown RBP-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 PTX4Q96A99 478 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 PANX2Q96RD6 677 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 NUDT16L1Q9BRJ7 211 aaKnown RBP-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 SLC25A2Q9BXI2 301 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 OR10A4Q9H209 315 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 TDRD3Q9H7E2 651 aaKnown RBP-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 FOLH1BQ9HBA9 442 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 CWC25Q9NXE8 425 aaPredicted RBP-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 SUN2Q9UH99 717 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 TAGLN3Q9UI15 199 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 OARD1Q9Y530 152 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 USP9YO00507 2555 aaPredicted RBP-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 CACNA1SQ13698 1873 aa-2.45□□□□□ -2.8
RNU6-539P-201ENST00000516665 MXRA5Q9NR99 2828 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 ERI3O43414 337 aaKnown RBP-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 TIMM44O43615 452 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 SCN2BO60939 215 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 TRIM16O95361 564 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 F10P00742 488 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 HTR2BP41595 481 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 SLC1A2P43004 574 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 GABRA4P48169 554 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 CDK5Q00535 292 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 ZP4Q12836 540 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 C1orf61Q13536 156 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 YIF1BQ5BJH7 314 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 ARMC4Q5T2S8 1044 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 DPY19L2P2Q6ZN68 376 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 Q6ZN92 141 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 SLC26A11Q86WA9 606 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 C4orf19Q8IY42 314 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 LINC01561Q8N1V8 128 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 OR4S2Q8NH73 311 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 OCC1Q8TAD7 63 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 GGHQ92820 318 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 FGF11Q92914 225 aa-2.46□□□□□ -2.8
RNU6-539P-201ENST00000516665 UBE2E3Q969T4 207 aa-2.46□□□□□ -2.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms