RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 PPANQ9NQ55 473 aaKnown RBP3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 UBQLN4Q9NRR5 601 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 DECR2Q9NUI1 292 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 GIMAP4Q9NUV9 329 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 NECAP2Q9NVZ3 263 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 TMEM45AQ9NWC5 275 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 NSMCE4AQ9NXX6 385 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 TAS2R7Q9NYW3 318 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 NUDT4Q9NZJ9 180 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 UPB1Q9UBR1 384 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 SLC13A4Q9UKG4 626 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 UTS2RQ9UKP6 389 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 GRID1Q9ULK0 1009 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 TFR2Q9UP52 801 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 CMAHPQ9Y471 501 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 ANGPTL3Q9Y5C1 460 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 DNAH9Q9NYC9 4486 aa3.08□□□□□ -1.92
PDLIM5-218ENST00000513341 DOCK11Q5JSL3 2073 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 ARPC4-TTLL3A0A0A6YYG9 625 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 SLC22A23A1A5C7 686 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 SH3PXD2BA1X283 911 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 OR6C65A6NJZ3 312 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 ZNF716A6NP11 495 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 MYO1GB0I1T2 1018 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 SRRM5B3KS81 715 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 G3V4G9 280 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 H3BNH8 94 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 CCDC188H7C350 402 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 M0R233 179 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 SULT2B1O00204 365 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 EIF1BO60739 113 aaKnown RBP3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 FOXH1O75593 365 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 RP2O75695 350 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 SEC14L2O76054 403 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 ZNF432O94892 652 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 NKX2-2O95096 273 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 PSMG1O95456 288 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 OXSR1O95747 527 aaPredicted RBP3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 IGKV3-15P01624 115 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 IGLV1-44P01699 117 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 KRT14P02533 472 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 CSF1P09603 554 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 ALOX5P09917 674 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 CTAGE8P0CG41 777 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 HPGDP15428 266 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 CBR1P16152 277 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 TSPAN8P19075 237 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 OMGP23515 440 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 CPT2P23786 658 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 PRPH2P23942 346 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 SHC1P29353 583 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 GABRA3P34903 492 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 GLRXP35754 106 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 ARR3P36575 388 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 MAP3K8P41279 467 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 MAGEA8P43361 318 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 KCNJ1P48048 391 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 P2RX1P51575 399 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 UBE2NP61088 152 aaKnown RBP3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 H3F3AP84243 136 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 TRADDQ15628 312 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 TRIP13Q15645 432 aaPredicted RBP3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 LTB4RQ15722 352 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 FBXO48Q5FWF7 155 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 ARMCX4Q5H9R4 360 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 TECRLQ5HYJ1 363 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 FRG2Q64ET8 278 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 FAM180BQ6P0A1 224 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 ZCCHC12Q6PEW1 402 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 ISCA2Q86U28 154 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 IGFN1Q86VF2 1251 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 CARM1Q86X55 608 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 CTAGE4Q8IX94 777 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 CCDC36Q8IYA8 594 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 FAM9CQ8IZT9 166 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 FAM185AQ8N0U4 392 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 OR2L13Q8N349 312 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 TEX9Q8N6V9 391 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 POMGNT2Q8NAT1 580 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 OR4C3Q8NH37 302 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 LINC01006Q8NI28 216 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 RHEBL1Q8TAI7 183 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 FAM110DQ8TAY7 271 aaPredicted RBP3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 PIGXQ8TBF5 258 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 GPR119Q8TDV5 335 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 TAF15Q92804 592 aaKnown RBP eCLIP3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 RAB1CQ92928 201 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 LRRC39Q96DD0 335 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 TIMD4Q96H15 378 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 FAM71F1Q96KD3 344 aaPredicted RBP3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 COG8Q96MW5 612 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 FRG2BQ96QU4 278 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 ZNF300Q96RE9 604 aaPredicted RBP3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 ZNF347Q96SE7 839 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 RBBP8Q99708 897 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 MRPL1Q9BYD6 325 aaKnown RBP3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 HOXD1Q9GZZ0 328 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 IQCGQ9H095 443 aaKnown RBP3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 RHOJQ9H4E5 214 aa3.07□□□□□ -1.92
PDLIM5-218ENST00000513341 ANKRA2Q9H9E1 313 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms