RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 RAP1BP61224 184 aa10.89□□□□□ -0.67
PTCD1-205ENST00000485746 RAB1AP62820 205 aa10.89□□□□□ -0.67
PTCD1-205ENST00000485746 RAP1AP62834 184 aa10.89□□□□□ -0.67
PTCD1-205ENST00000485746 VLDLRP98155 873 aa10.89□□□□□ -0.67
PTCD1-205ENST00000485746 RUNX1T1Q06455 604 aa10.89□□□□□ -0.67
PTCD1-205ENST00000485746 ZBED5Q49AG3 693 aa10.89□□□□□ -0.67
PTCD1-205ENST00000485746 FAM205BPQ63HN1 556 aa10.89□□□□□ -0.67
PTCD1-205ENST00000485746 B3GLCTQ6Y288 498 aa10.89□□□□□ -0.67
PTCD1-205ENST00000485746 TRPM8Q7Z2W7 1104 aa10.89□□□□□ -0.67
PTCD1-205ENST00000485746 DHFR2Q86XF0 187 aa10.89□□□□□ -0.67
PTCD1-205ENST00000485746 ZDHHC21Q8IVQ6 265 aa10.89□□□□□ -0.67
PTCD1-205ENST00000485746 SLC22A24Q8N4F4 322 aa10.89□□□□□ -0.67
PTCD1-205ENST00000485746 SLC7A13Q8TCU3 470 aa10.89□□□□□ -0.67
PTCD1-205ENST00000485746 FBXO17Q96EF6 278 aa10.89□□□□□ -0.67
PTCD1-205ENST00000485746 C7orf34Q96L11 122 aa10.89□□□□□ -0.67
PTCD1-205ENST00000485746 BDH2Q9BUT1 245 aa10.89□□□□□ -0.67
PTCD1-205ENST00000485746 TMUB1Q9BVT8 246 aa10.89□□□□□ -0.67
PTCD1-205ENST00000485746 CACNG6Q9BXT2 260 aa10.89□□□□□ -0.67
PTCD1-205ENST00000485746 MUC13Q9H3R2 512 aa10.89□□□□□ -0.67
PTCD1-205ENST00000485746 ZNF701Q9NV72 531 aaPredicted RBP10.89□□□□□ -0.67
PTCD1-205ENST00000485746 TMEM38BQ9NVV0 291 aa10.89□□□□□ -0.67
PTCD1-205ENST00000485746 CRNNQ9UBG3 495 aaPredicted RBP10.89□□□□□ -0.67
PTCD1-205ENST00000485746 GRHPRQ9UBQ7 328 aa10.89□□□□□ -0.67
PTCD1-205ENST00000485746 SPEF1Q9Y4P9 236 aa10.89□□□□□ -0.67
PTCD1-205ENST00000485746 PMF1-BGLAPU3KQ54 211 aa10.89□□□□□ -0.67
PTCD1-205ENST00000485746 POLQO75417 2590 aa10.89□□□□□ -0.67
PTCD1-205ENST00000485746 TRBV4-1A0A0J9YWV2 114 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 UNC119BA6NIH7 251 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 XKRYO14609 159 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 OR10H3O60404 316 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 IGKV3-15P01624 115 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 IGLV1-44P01699 117 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 CD8AP01732 235 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 CELA3BP08861 270 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 IFNGR2P38484 337 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 GIPRP48546 466 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 ERVK-25P63136 954 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 GALK2Q01415 458 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 RAB35Q15286 201 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 SGCAQ16586 387 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 SLC36A2Q495M3 483 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 MTX3Q5HYI7 312 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 ARMC4Q5T2S8 1044 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 TMPRSS11FQ6ZWK6 438 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 ZNF627Q7L945 461 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 SLC16A14Q7RTX9 510 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 TSEN54Q7Z6J9 526 aaKnown RBP10.88□□□□□ -0.67
PTCD1-205ENST00000485746 DTX2Q86UW9 622 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 SKA3Q8IX90 412 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 LRRC18Q8N456 261 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 OR4K5Q8NGD3 323 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 FNDC8Q8TC99 324 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 HDAC2Q92769 488 aaKnown RBP10.88□□□□□ -0.67
PTCD1-205ENST00000485746 SH3GL3Q99963 347 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 THTPAQ9BU02 230 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 ALG12Q9BV10 488 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 DENND2DQ9H6A0 471 aaPredicted RBP10.88□□□□□ -0.67
PTCD1-205ENST00000485746 BARX1Q9HBU1 254 aaPredicted RBP10.88□□□□□ -0.67
PTCD1-205ENST00000485746 CCNB1IP1Q9NPC3 277 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 ACTR3BQ9P1U1 418 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 FBXL3Q9UKT7 428 aa10.88□□□□□ -0.67
PTCD1-205ENST00000485746 PRPF19Q9UMS4 504 aaKnown RBP10.88□□□□□ -0.67
PTCD1-205ENST00000485746 ANKRD17O75179 2603 aaKnown RBP10.87□□□□□ -0.67
PTCD1-205ENST00000485746 IGHV2OR16-5A0A0B4J2B6 119 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 NPIPB13A6NJU9 1138 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 NPIPB4C9JG80 1138 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 OVOL3O00110 214 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 CDC42EP2O14613 210 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 SMAD7O15105 426 aaKnown RBP10.87□□□□□ -0.67
PTCD1-205ENST00000485746 NDUFB2O95178 105 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 SLC2A10O95528 541 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 PTHP01270 115 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 IGHMP01871 453 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 TSPAN19P0C672 248 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 PATE4P0C8F1 98 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 PAX1P15863 534 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 CALCRP30988 508 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 RRM2P31350 389 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 SERPINF1P36955 418 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 HSF2Q03933 536 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 PLP2Q04941 152 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 DAG1Q14118 895 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 RAB39AQ14964 217 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 FXNQ16595 210 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 CLEC12BQ2HXU8 276 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 THEM4Q5T1C6 240 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 DPPA2Q7Z7J5 298 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 IGFBPL1Q8WX77 278 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 HTRA1Q92743 480 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 CCDC124Q96CT7 223 aaKnown RBP10.87□□□□□ -0.67
PTCD1-205ENST00000485746 RSRC1Q96IZ7 334 aaKnown RBP10.87□□□□□ -0.67
PTCD1-205ENST00000485746 TSPAN32Q96QS1 320 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 MRPL13Q9BYD1 178 aaKnown RBP10.87□□□□□ -0.67
PTCD1-205ENST00000485746 TRIM15Q9C019 465 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 SEC61A2Q9H9S3 476 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 IL1RAPQ9NPH3 570 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 CA10Q9NS85 328 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 B3GNT2Q9NY97 397 aa10.87□□□□□ -0.67
PTCD1-205ENST00000485746 ABCA4P78363 2273 aa10.86□□□□□ -0.67
PTCD1-205ENST00000485746 CSMD2Q7Z408 3487 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms