RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 MCHR2Q969V1 340 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 CCT8L2Q96SF2 557 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 CDRT15Q96T59 188 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 SH3GL3Q99963 347 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 GRIP2Q9C0E4 1043 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 CA10Q9NS85 328 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 TMEM38BQ9NVV0 291 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 HIF3AQ9Y2N7 669 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 ENPP4Q9Y6X5 453 aa10.65□□□□□ -0.7
MSH5-216ENST00000484309 ABCA1O95477 2261 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 NAV3Q8IVL0 2385 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 EFCAB9A8MZ26 197 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 GMNNO75496 209 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 RAB36O95755 333 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 OR4A8P0C604 315 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 TSPAN19P0C672 248 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 PAX7P23759 505 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 THBS4P35443 961 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 DAP3P51398 398 aaKnown RBP10.64□□□□□ -0.71
MSH5-216ENST00000484309 CTXN1P60606 82 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 RAB1AP62820 205 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 VLDLRP98155 873 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 PRKCDQ05655 676 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 CHRNB3Q05901 458 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 CD47Q08722 323 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 SNTB2Q13425 540 aaKnown RBP10.64□□□□□ -0.71
MSH5-216ENST00000484309 RAB39AQ14964 217 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 RAB35Q15286 201 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 ADIPOQQ15848 244 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 MST1LQ2TV78 715 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 C3orf36Q3SXR2 165 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 FGD3Q5JSP0 725 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 ARMC4Q5T2S8 1044 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 ZNF627Q7L945 461 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 CYP4Z1Q86W10 505 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 CCDC36Q8IYA8 594 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 DEFB107AQ8IZN7 70 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 SLC22A24Q8N4F4 322 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 CLDN22Q8N7P3 220 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 FAM169BQ8N8A8 192 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 OR4K5Q8NGD3 323 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 ACOT11Q8WXI4 607 aaPredicted RBP10.64□□□□□ -0.71
MSH5-216ENST00000484309 HDAC2Q92769 488 aaKnown RBP10.64□□□□□ -0.71
MSH5-216ENST00000484309 FAM46AQ96IP4 442 aaKnown RBP10.64□□□□□ -0.71
MSH5-216ENST00000484309 ZNF75AQ96N20 296 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 TNFRSF13CQ96RJ3 184 aa10.64□□□□□ -0.71
MSH5-216ENST00000484309 NMNAT1Q9HAN9 279 aaPredicted RBP10.64□□□□□ -0.71
MSH5-216ENST00000484309 DCAF13Q9NV06 445 aaKnown RBP10.64□□□□□ -0.71
MSH5-216ENST00000484309 SAMD4AQ9UPU9 718 aaKnown RBP10.64□□□□□ -0.71
MSH5-216ENST00000484309 FN1P02751 2386 aaKnown RBP10.63□□□□□ -0.71
MSH5-216ENST00000484309 IGKV1D-43A0A0B4J1Z2 117 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 CDC42EP2O14613 210 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 ARPC2O15144 300 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 UBL3O95164 117 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 HEXAP06865 529 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 H1F0P07305 194 aaKnown RBP10.63□□□□□ -0.71
MSH5-216ENST00000484309 HSD17B1P14061 328 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 ZNF14P17017 642 aaPredicted RBP10.63□□□□□ -0.71
MSH5-216ENST00000484309 CDAP32320 146 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 SERPINF1P36955 418 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 ZNF84P51523 738 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 SNRPD2P62316 118 aaKnown RBP10.63□□□□□ -0.71
MSH5-216ENST00000484309 FHL1Q13642 323 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 DAG1Q14118 895 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 ETFDHQ16134 617 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 HIST3H3Q16695 136 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 SWI5Q1ZZU3 235 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 SAMD4BQ5PRF9 694 aaKnown RBP10.63□□□□□ -0.71
MSH5-216ENST00000484309 PODNL1Q6PEZ8 512 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 MBOAT2Q6ZWT7 520 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 PIWIL3Q7Z3Z3 882 aaKnown RBP10.63□□□□□ -0.71
MSH5-216ENST00000484309 OAFQ86UD1 273 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 LRRC18Q8N456 261 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 FITM2Q8N6M3 262 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 ZNF525Q8N782 197 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 ANKS4BQ8N8V4 417 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 LRRC75AQ8NAA5 344 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 OR4F15Q8NGB8 312 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 OR52J3Q8NH60 311 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 SLC7A13Q8TCU3 470 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 NSMAFQ92636 917 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 TSPAN32Q96QS1 320 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 VRK1Q99986 396 aaPredicted RBP10.63□□□□□ -0.71
MSH5-216ENST00000484309 MRPL13Q9BYD1 178 aaKnown RBP10.63□□□□□ -0.71
MSH5-216ENST00000484309 TXNIPQ9H3M7 391 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 RNF121Q9H920 327 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 BARX1Q9HBU1 254 aaPredicted RBP10.63□□□□□ -0.71
MSH5-216ENST00000484309 MOV10Q9HCE1 1003 aaKnown RBP10.63□□□□□ -0.71
MSH5-216ENST00000484309 NDUFAF4Q9P032 175 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 MAGEL2Q9UJ55 1249 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 ZNF346Q9UL40 294 aaKnown RBP10.63□□□□□ -0.71
MSH5-216ENST00000484309 FAM32AQ9Y421 112 aaKnown RBP10.63□□□□□ -0.71
MSH5-216ENST00000484309 PMF1-BGLAPU3KQ54 211 aa10.63□□□□□ -0.71
MSH5-216ENST00000484309 IGHV4-30-2A0A087WSY4 118 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 TRBV4-1A0A0J9YWV2 114 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 H7C1C5 153 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 H7C417 338 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 GPRIN2O60269 458 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 FARS2O95363 451 aaKnown RBP10.62□□□□□ -0.71
MSH5-216ENST00000484309 OR8G3PP0DMU2 310 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms