RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 ZNF716A6NP11 495 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 C11orf98E9PRG8 122 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 DCTN6O00399 190 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 XKRYO14609 159 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 TNFSF11O14788 317 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 ARHGEF9O43307 516 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 CYTIPO60759 359 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 RAMP1O60894 148 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 TRMUO75648 421 aaKnown RBP5.89□□□□□ -1.47
ATG4A-207ENST00000474825 TRAPPC6AO75865 159 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 ZNF432O94892 652 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 GABARAPO95166 117 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 TFP02787 698 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 HRGP04196 525 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 SCG5P05408 212 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 CD1AP06126 327 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 CELA3AP09093 270 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 PGA4P0DJD7 388 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 PGA3P0DJD8 388 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 IFNGR1P15260 489 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 KLK2P20151 261 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 POU3F2P20265 443 aaPredicted RBP5.89□□□□□ -1.47
ATG4A-207ENST00000474825 ENPP1P22413 925 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 AHCYP23526 432 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 GTF2E2P29084 291 aaKnown RBP5.89□□□□□ -1.47
ATG4A-207ENST00000474825 CRABP1P29762 137 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 SFTPDP35247 375 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 ACVR1BP36896 505 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 CD97P48960 835 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 ETV1P50549 477 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 UCNP55089 124 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 CARD18P57730 90 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 ACTC1P68032 377 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 ACTA1P68133 377 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 BDH1Q02338 343 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 ZNF85Q03923 595 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 HSF2Q03933 536 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 MLLT11Q13015 90 aaPredicted RBP5.89□□□□□ -1.47
ATG4A-207ENST00000474825 GALEQ14376 348 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 SPHARQ15513 63 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 NEDD8Q15843 81 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 INAQ16352 499 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 KCNMB1Q16558 191 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 SLC16A12Q6ZSM3 486 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 FOXL2NBQ6ZUU3 175 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 HDDC2Q7Z4H3 204 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 ADGRE4PQ86SQ3 457 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 JAZF1Q86VZ6 243 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 ATCAYQ86WG3 371 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 SIAH3Q8IW03 269 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 UEVLDQ8IX04 471 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 TMEM123Q8N131 208 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 SYS1Q8N2H4 156 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 KDM8Q8N371 416 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 ATP6V1C2Q8NEY4 427 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 OR9Q1Q8NGQ5 310 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 NEIL3Q8TAT5 605 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 RPS4Y2Q8TD47 263 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 TMEM54Q969K7 222 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 CPNE4Q96A23 557 aaPredicted RBP5.89□□□□□ -1.47
ATG4A-207ENST00000474825 INTS12Q96CB8 462 aaKnown RBP5.89□□□□□ -1.47
ATG4A-207ENST00000474825 ZHX1-C8orf76Q96EF9 292 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 SLC25A44Q96H78 314 aaPredicted RBP5.89□□□□□ -1.47
ATG4A-207ENST00000474825 TXNDC15Q96J42 360 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 OR5M11Q96RB7 305 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 UCN2Q96RP3 112 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 MGLLQ99685 303 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 ARHGAP9Q9BRR9 750 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 NUAK2Q9H093 628 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.89□□□□□ -1.47
ATG4A-207ENST00000474825 OR51V1Q9H2C8 321 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 TMEM185BQ9H7F4 350 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 RPRD1BQ9NQG5 326 aaKnown RBP5.89□□□□□ -1.47
ATG4A-207ENST00000474825 ERVK13-1Q9NX77 482 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 TAS2R16Q9NYV7 291 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 TNFRSF10DQ9UBN6 386 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 ING1Q9UK53 422 aaPredicted RBP5.89□□□□□ -1.47
ATG4A-207ENST00000474825 RCE1Q9Y256 329 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 APC2O95996 2303 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 EML6Q6ZMW3 1958 aa5.89□□□□□ -1.47
ATG4A-207ENST00000474825 SPENQ96T58 3664 aaKnown RBP5.89□□□□□ -1.47
ATG4A-207ENST00000474825 CNTRLQ7Z7A1 2325 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 IGF2RP11717 2491 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 MPDZO75970 2070 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 C12orf71A8MTZ7 269 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 NPIPA5E9PKD4 350 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 H0YC42 278 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 ACOT7O00154 380 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 AQP7O14520 342 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 CXCL13O43927 109 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 OPN1LWP04000 364 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 PDGFAP04085 211 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 GYPBP06028 91 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 GAAP10253 952 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 CTLA4P16410 223 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 CPEP16870 476 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 ZNF43P17038 809 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 MYL12AP19105 171 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 CD53P19397 219 aa5.88□□□□□ -1.47
ATG4A-207ENST00000474825 ALOX5APP20292 161 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms