RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 ZNF100Q8IYN0 542 aa12.78□□□□□ -0.36
COL27A1-203ENST00000468565 GPR32P1Q8NGA4 272 aa12.78□□□□□ -0.36
COL27A1-203ENST00000468565 KISS1RQ969F8 398 aaPredicted RBP12.78□□□□□ -0.36
COL27A1-203ENST00000468565 C3orf49Q96BT1 292 aa12.78□□□□□ -0.36
COL27A1-203ENST00000468565 S100PBPQ96BU1 408 aa12.78□□□□□ -0.36
COL27A1-203ENST00000468565 DNAJA3Q96EY1 480 aa12.78□□□□□ -0.36
COL27A1-203ENST00000468565 NOSIPQ9Y314 301 aaKnown RBP12.78□□□□□ -0.36
COL27A1-203ENST00000468565 TEP1Q99973 2627 aaKnown RBP12.78□□□□□ -0.36
COL27A1-203ENST00000468565 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.78□□□□□ -0.36
COL27A1-203ENST00000468565 MPZL2O60487 215 aa12.78□□□□□ -0.36
COL27A1-203ENST00000468565 AQP6Q13520 282 aa12.78□□□□□ -0.36
COL27A1-203ENST00000468565 SPCS2Q15005 226 aa12.78□□□□□ -0.36
COL27A1-203ENST00000468565 UBE2UQ5VVX9 321 aa12.78□□□□□ -0.36
COL27A1-203ENST00000468565 ATG4DQ86TL0 474 aaPredicted RBP12.78□□□□□ -0.36
COL27A1-203ENST00000468565 CCDC103Q8IW40 242 aa12.78□□□□□ -0.36
COL27A1-203ENST00000468565 GTPBP3Q969Y2 492 aaKnown RBP12.78□□□□□ -0.36
COL27A1-203ENST00000468565 ZNF775Q96BV0 537 aaPredicted RBP12.78□□□□□ -0.36
COL27A1-203ENST00000468565 HS3ST6Q96QI5 342 aa12.78□□□□□ -0.36
COL27A1-203ENST00000468565 SIGLEC11Q96RL6 698 aa12.78□□□□□ -0.36
COL27A1-203ENST00000468565 RHNO1Q9BSD3 238 aa12.78□□□□□ -0.36
COL27A1-203ENST00000468565 NMNAT1Q9HAN9 279 aaPredicted RBP12.78□□□□□ -0.36
COL27A1-203ENST00000468565 C12orf10Q9HB07 376 aa12.78□□□□□ -0.36
COL27A1-203ENST00000468565 RHCGQ9UBD6 479 aa12.78□□□□□ -0.36
COL27A1-203ENST00000468565 MGAT4BQ9UQ53 548 aa12.78□□□□□ -0.36
COL27A1-203ENST00000468565 ROS1P08922 2347 aa12.77□□□□□ -0.37
COL27A1-203ENST00000468565 LIPT2A6NK58 231 aa12.77□□□□□ -0.37
COL27A1-203ENST00000468565 RAMP1O60894 148 aa12.77□□□□□ -0.37
COL27A1-203ENST00000468565 H1F0P07305 194 aaKnown RBP12.77□□□□□ -0.37
COL27A1-203ENST00000468565 CD53P19397 219 aa12.77□□□□□ -0.37
COL27A1-203ENST00000468565 COX5AP20674 150 aa12.77□□□□□ -0.37
COL27A1-203ENST00000468565 EDNRAP25101 427 aa12.77□□□□□ -0.37
COL27A1-203ENST00000468565 DEFB113Q30KQ7 82 aa12.77□□□□□ -0.37
COL27A1-203ENST00000468565 BHLHA15Q7RTS1 189 aaPredicted RBP12.77□□□□□ -0.37
COL27A1-203ENST00000468565 WFDC8Q8IUA0 241 aa12.77□□□□□ -0.37
COL27A1-203ENST00000468565 LSMEM1Q8N8F7 131 aa12.77□□□□□ -0.37
COL27A1-203ENST00000468565 ZBTB8BQ8NAP8 495 aaPredicted RBP12.77□□□□□ -0.37
COL27A1-203ENST00000468565 STK35Q8TDR2 534 aa12.77□□□□□ -0.37
COL27A1-203ENST00000468565 HSD17B8Q92506 261 aa12.77□□□□□ -0.37
COL27A1-203ENST00000468565 APH1AQ96BI3 265 aa12.77□□□□□ -0.37
COL27A1-203ENST00000468565 RSPO3Q9BXY4 272 aaPredicted RBP12.77□□□□□ -0.37
COL27A1-203ENST00000468565 EVA1AQ9H8M9 152 aa12.77□□□□□ -0.37
COL27A1-203ENST00000468565 SLC9A8Q9Y2E8 581 aa12.77□□□□□ -0.37
COL27A1-203ENST00000468565 ITPR3Q14573 2671 aa12.77□□□□□ -0.37
COL27A1-203ENST00000468565 SH3PXD2BA1X283 911 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 M0R3G1 203 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 FRS3O43559 492 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 NPIPB7O75200 414 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 CDK1P06493 297 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 INHBBP09529 407 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 NR4A1P22736 598 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 CRISP1P54107 249 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 DGCR6Q14129 220 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 TSC22D1Q15714 1073 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 TBCEQ15813 527 aaPredicted RBP12.76□□□□□ -0.37
COL27A1-203ENST00000468565 FBXW9Q5XUX1 488 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 ZNF770Q6IQ21 691 aaPredicted RBP12.76□□□□□ -0.37
COL27A1-203ENST00000468565 KLHL17Q6TDP4 642 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 DEF8Q6ZN54 512 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 SSX8Q7RTT4 187 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 VANGL1Q8TAA9 524 aaPredicted RBP12.76□□□□□ -0.37
COL27A1-203ENST00000468565 DHRS1Q96LJ7 313 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 SF3B5Q9BWJ5 86 aaKnown RBP12.76□□□□□ -0.37
COL27A1-203ENST00000468565 TAPBPLQ9BX59 468 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 PALMDQ9NP74 551 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 BEX4Q9NWD9 120 aaPredicted RBP12.76□□□□□ -0.37
COL27A1-203ENST00000468565 FKBP14Q9NWM8 211 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 FLVCR1Q9Y5Y0 555 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 AQP7P3A6NL99 342 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 ZAR1LA6NP61 321 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 FFAR1O14842 300 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 MRPL33O75394 65 aaKnown RBP12.76□□□□□ -0.37
COL27A1-203ENST00000468565 GASTP01350 101 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 GABRB1P18505 474 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 IGHV1-2P23083 117 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 SERPINB10P48595 397 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 UGT2B15P54855 530 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 SLC17A1Q14916 467 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 PTGES3Q15185 160 aaKnown RBP12.76□□□□□ -0.37
COL27A1-203ENST00000468565 OR7A5Q15622 319 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 TAB1Q15750 504 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 C1orf140Q5VVS0 124 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.76□□□□□ -0.37
COL27A1-203ENST00000468565 COMTD1Q86VU5 262 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 GGHQ92820 318 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 PLPPR2Q96GM1 343 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 TRIM2Q9C040 744 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 NGBQ9NPG2 151 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 TBCCD1Q9NVR7 557 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 PARPBPQ9NWS1 579 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 CLN6Q9NWW5 311 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 RPS6KB2Q9UBS0 482 aa12.76□□□□□ -0.37
COL27A1-203ENST00000468565 TESQ9UGI8 421 aaKnown RBP12.76□□□□□ -0.37
COL27A1-203ENST00000468565 ARID1AO14497 2285 aa12.75□□□□□ -0.37
COL27A1-203ENST00000468565 TRBV4-1A0A0J9YWV2 114 aa12.75□□□□□ -0.37
COL27A1-203ENST00000468565 OSMP13725 252 aa12.75□□□□□ -0.37
COL27A1-203ENST00000468565 HOXC5Q00444 222 aa12.75□□□□□ -0.37
COL27A1-203ENST00000468565 ACKR1Q16570 336 aa12.75□□□□□ -0.37
COL27A1-203ENST00000468565 DGUOKQ16854 277 aa12.75□□□□□ -0.37
COL27A1-203ENST00000468565 C5orf46Q6UWT4 87 aa12.75□□□□□ -0.37
COL27A1-203ENST00000468565 C20orf204Q6ZNR8 217 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms