RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 RINLQ6ZS11 566 aa16.11■□□□□ 0.17
CDKN1A-206ENST00000462537 PIWIL3Q7Z3Z3 882 aaKnown RBP16.11■□□□□ 0.17
CDKN1A-206ENST00000462537 MYPOPQ86VE0 399 aaPredicted RBP16.11■□□□□ 0.17
CDKN1A-206ENST00000462537 OR52J3Q8NH60 311 aa16.11■□□□□ 0.17
CDKN1A-206ENST00000462537 BCAS4Q8TDM0 211 aa16.11■□□□□ 0.17
CDKN1A-206ENST00000462537 MCHR2Q969V1 340 aa16.11■□□□□ 0.17
CDKN1A-206ENST00000462537 FAM46AQ96IP4 442 aaKnown RBP16.11■□□□□ 0.17
CDKN1A-206ENST00000462537 TNFRSF13CQ96RJ3 184 aa16.11■□□□□ 0.17
CDKN1A-206ENST00000462537 KRCC1Q9NPI7 259 aaPredicted RBP16.11■□□□□ 0.17
CDKN1A-206ENST00000462537 CBLN4Q9NTU7 201 aa16.11■□□□□ 0.17
CDKN1A-206ENST00000462537 CENPBD1B2RD01 187 aa16.1■□□□□ 0.17
CDKN1A-206ENST00000462537 ENTPD5O75356 428 aa16.1■□□□□ 0.17
CDKN1A-206ENST00000462537 UBL3O95164 117 aa16.1■□□□□ 0.17
CDKN1A-206ENST00000462537 FARS2O95363 451 aaKnown RBP16.1■□□□□ 0.17
CDKN1A-206ENST00000462537 FABP3P05413 133 aa16.1■□□□□ 0.17
CDKN1A-206ENST00000462537 CALCRP30988 508 aa16.1■□□□□ 0.17
CDKN1A-206ENST00000462537 APOBEC3AP31941 199 aaPredicted RBP16.1■□□□□ 0.17
CDKN1A-206ENST00000462537 RPL4P36578 427 aaKnown RBP16.1■□□□□ 0.17
CDKN1A-206ENST00000462537 ACVR1BP36896 505 aa16.1■□□□□ 0.17
CDKN1A-206ENST00000462537 PTDSS1P48651 473 aaKnown RBP16.1■□□□□ 0.17
CDKN1A-206ENST00000462537 CD47Q08722 323 aa16.1■□□□□ 0.17
CDKN1A-206ENST00000462537 TAF11Q15544 211 aa16.1■□□□□ 0.17
CDKN1A-206ENST00000462537 ARMC4Q5T2S8 1044 aa16.1■□□□□ 0.17
CDKN1A-206ENST00000462537 VHLLQ6RSH7 139 aa16.1■□□□□ 0.17
CDKN1A-206ENST00000462537 CYP2R1Q6VVX0 501 aa16.1■□□□□ 0.17
CDKN1A-206ENST00000462537 TMPRSS11FQ6ZWK6 438 aa16.1■□□□□ 0.17
CDKN1A-206ENST00000462537 SLC22A24Q8N4F4 322 aa16.1■□□□□ 0.17
CDKN1A-206ENST00000462537 MRPL13Q9BYD1 178 aaKnown RBP16.1■□□□□ 0.17
CDKN1A-206ENST00000462537 NDEL1Q9GZM8 345 aa16.1■□□□□ 0.17
CDKN1A-206ENST00000462537 TMEM38BQ9NVV0 291 aa16.1■□□□□ 0.17
CDKN1A-206ENST00000462537 B3GNT2Q9NY97 397 aa16.1■□□□□ 0.17
CDKN1A-206ENST00000462537 ZNF346Q9UL40 294 aaKnown RBP16.1■□□□□ 0.17
CDKN1A-206ENST00000462537 ALPK2Q86TB3 2170 aa16.1■□□□□ 0.17
CDKN1A-206ENST00000462537 TEP1Q99973 2627 aaKnown RBP16.1■□□□□ 0.17
CDKN1A-206ENST00000462537 VPS13CQ709C8 3753 aa16.09■□□□□ 0.17
CDKN1A-206ENST00000462537 ARID1AO14497 2285 aa16.09■□□□□ 0.17
CDKN1A-206ENST00000462537 NPIPB13A6NJU9 1138 aa16.09■□□□□ 0.17
CDKN1A-206ENST00000462537 NPIPB4C9JG80 1138 aa16.09■□□□□ 0.17
CDKN1A-206ENST00000462537 CDC42EP2O14613 210 aa16.09■□□□□ 0.17
CDKN1A-206ENST00000462537 GADD45GO95257 159 aa16.09■□□□□ 0.17
CDKN1A-206ENST00000462537 SEMG1P04279 462 aa16.09■□□□□ 0.17
CDKN1A-206ENST00000462537 OR8G3PP0DMU2 310 aa16.09■□□□□ 0.17
CDKN1A-206ENST00000462537 GIPRP48546 466 aa16.09■□□□□ 0.17
CDKN1A-206ENST00000462537 SMIM11AP58511 58 aa16.09■□□□□ 0.17
CDKN1A-206ENST00000462537 RPL27P61353 136 aaKnown RBP16.09■□□□□ 0.17
CDKN1A-206ENST00000462537 RAB1AP62820 205 aa16.09■□□□□ 0.17
CDKN1A-206ENST00000462537 HIST3H3Q16695 136 aa16.09■□□□□ 0.17
CDKN1A-206ENST00000462537 ZBED5Q49AG3 693 aa16.09■□□□□ 0.17
CDKN1A-206ENST00000462537 SKA3Q8IX90 412 aa16.09■□□□□ 0.17
CDKN1A-206ENST00000462537 ARHGAP24Q8N264 748 aa16.09■□□□□ 0.17
CDKN1A-206ENST00000462537 OR4K5Q8NGD3 323 aa16.09■□□□□ 0.17
CDKN1A-206ENST00000462537 HTRA1Q92743 480 aa16.09■□□□□ 0.17
CDKN1A-206ENST00000462537 HDAC2Q92769 488 aaKnown RBP16.09■□□□□ 0.17
CDKN1A-206ENST00000462537 SH3GL3Q99963 347 aa16.09■□□□□ 0.17
CDKN1A-206ENST00000462537 CACNG6Q9BXT2 260 aa16.09■□□□□ 0.17
CDKN1A-206ENST00000462537 GRIP2Q9C0E4 1043 aa16.09■□□□□ 0.17
CDKN1A-206ENST00000462537 NOX3Q9HBY0 568 aa16.09■□□□□ 0.17
CDKN1A-206ENST00000462537 AURKCQ9UQB9 309 aa16.09■□□□□ 0.17
CDKN1A-206ENST00000462537 IGHV2OR16-5A0A0B4J2B6 119 aa16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 TRBV4-1A0A0J9YWV2 114 aa16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 PDE5AO76074 875 aa16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 SLC2A10O95528 541 aa16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 IGHMP01871 453 aa16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 PATE4P0C8F1 98 aa16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 T-ENOLP0DO92 83 aa16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 NR2C1P13056 603 aa16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 ATP6V1B2P21281 511 aa16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 ERVK-25P63136 954 aa16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 CHRNB3Q05901 458 aa16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 FMODQ06828 376 aa16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 SEC23BQ15437 767 aa16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 ZDHHC21Q8IVQ6 265 aa16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 LRRC75AQ8NAA5 344 aa16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 OR4F15Q8NGB8 312 aa16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 NSMAFQ92636 917 aa16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 FBXO17Q96EF6 278 aa16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 MS4A3Q96HJ5 214 aa16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 TSPAN32Q96QS1 320 aa16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 KCNK17Q96T54 332 aa16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 SEPHS2Q99611 448 aa16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 DENND2DQ9H6A0 471 aaPredicted RBP16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 RNF121Q9H920 327 aa16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 DLL4Q9NR61 685 aa16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 CA10Q9NS85 328 aa16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 ZNF224Q9NZL3 707 aa16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 ACTR3BQ9P1U1 418 aa16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 GDF2Q9UK05 429 aaPredicted RBP16.08■□□□□ 0.16
CDKN1A-206ENST00000462537 TRIM64A6NGJ6 449 aa16.07■□□□□ 0.16
CDKN1A-206ENST00000462537 TRIM64BA6NI03 449 aa16.07■□□□□ 0.16
CDKN1A-206ENST00000462537 A6NIZ1 184 aa16.07■□□□□ 0.16
CDKN1A-206ENST00000462537 NDUFS7O75251 213 aa16.07■□□□□ 0.16
CDKN1A-206ENST00000462537 BMP4P12644 408 aa16.07■□□□□ 0.16
CDKN1A-206ENST00000462537 FOSL1P15407 271 aa16.07■□□□□ 0.16
CDKN1A-206ENST00000462537 RRM2P31350 389 aa16.07■□□□□ 0.16
CDKN1A-206ENST00000462537 RAP1BP61224 184 aa16.07■□□□□ 0.16
CDKN1A-206ENST00000462537 RAP1AP62834 184 aa16.07■□□□□ 0.16
CDKN1A-206ENST00000462537 FHL1Q13642 323 aa16.07■□□□□ 0.16
CDKN1A-206ENST00000462537 MTX3Q5HYI7 312 aa16.07■□□□□ 0.16
CDKN1A-206ENST00000462537 FAM205BPQ63HN1 556 aa16.07■□□□□ 0.16
CDKN1A-206ENST00000462537 C11orf71Q6IPW1 123 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms