RNA–Protein interactions for RNA: ENST00000449617.5

SEC22C-209, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 2

Gene SEC22C, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-209ENST00000449617 A4GNTQ9UNA3 340 aa11.3□□□□□ -0.6
SEC22C-209ENST00000449617 MALRD1Q5VYJ5 2156 aa11.3□□□□□ -0.6
SEC22C-209ENST00000449617 TMEM129A0AVI4 362 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 VSTM5A8MXK1 200 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 CXCR6O00574 342 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 ZNF682O95780 498 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 OR8G3PP0DMU2 310 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 ZNF35P13682 527 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 FUT4P22083 530 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 USF1P22415 310 aaPredicted RBP11.29□□□□□ -0.6
SEC22C-209ENST00000449617 YAP1P46937 504 aaKnown RBP11.29□□□□□ -0.6
SEC22C-209ENST00000449617 DAP3P51398 398 aaKnown RBP11.29□□□□□ -0.6
SEC22C-209ENST00000449617 LSM11P83369 360 aaKnown RBP eCLIP11.29□□□□□ -0.6
SEC22C-209ENST00000449617 VLDLRP98155 873 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 MYBPC1Q00872 1141 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 ST3GAL3Q11203 375 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 RAB39AQ14964 217 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 HIST3H3Q16695 136 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 MSMPQ1L6U9 139 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 C6orf52Q5T4I8 152 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 C8orf82Q6P1X6 216 aaPredicted RBP11.29□□□□□ -0.6
SEC22C-209ENST00000449617 HDDC2Q7Z4H3 204 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 ZNF584Q8IVC4 421 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 ZCCHC24Q8N2G6 241 aaKnown RBP11.29□□□□□ -0.6
SEC22C-209ENST00000449617 SYT14Q8NB59 555 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 OR4K5Q8NGD3 323 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 LIPHQ8WWY8 451 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 MCHR2Q969V1 340 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 SEPHS2Q99611 448 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 DOK1Q99704 481 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 SH3GL3Q99963 347 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 PIMREGQ9BSJ6 248 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 MRPL13Q9BYD1 178 aaKnown RBP11.29□□□□□ -0.6
SEC22C-209ENST00000449617 RAB1BQ9H0U4 201 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 DYNLRB1Q9NP97 96 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 FBXL3Q9UKT7 428 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 CMAHPQ9Y471 501 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 SNX13Q9Y5W8 968 aa11.29□□□□□ -0.6
SEC22C-209ENST00000449617 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.29□□□□□ -0.62e-19■■■■■ 51.9
SEC22C-209ENST00000449617 SH3PXD2BA1X283 911 aa11.28□□□□□ -0.6
SEC22C-209ENST00000449617 VWC2LB2RUY7 222 aa11.28□□□□□ -0.6
SEC22C-209ENST00000449617 J3KTA2 159 aa11.28□□□□□ -0.6
SEC22C-209ENST00000449617 GSTA4O15217 222 aa11.28□□□□□ -0.6
SEC22C-209ENST00000449617 ENTPD5O75356 428 aa11.28□□□□□ -0.6
SEC22C-209ENST00000449617 TRMUO75648 421 aaKnown RBP11.28□□□□□ -0.6
SEC22C-209ENST00000449617 FARS2O95363 451 aaKnown RBP11.28□□□□□ -0.6
SEC22C-209ENST00000449617 IFNW1P05000 195 aa11.28□□□□□ -0.6
SEC22C-209ENST00000449617 TSPAN19P0C672 248 aa11.28□□□□□ -0.6
SEC22C-209ENST00000449617 IFI30P13284 250 aa11.28□□□□□ -0.6
SEC22C-209ENST00000449617 NR4A2P43354 598 aa11.28□□□□□ -0.6
SEC22C-209ENST00000449617 GSK3BP49841 420 aa11.28□□□□□ -0.6
SEC22C-209ENST00000449617 NUDT2P50583 147 aa11.28□□□□□ -0.6
SEC22C-209ENST00000449617 GGTLC2Q14390 218 aa11.28□□□□□ -0.6
SEC22C-209ENST00000449617 ARMC4Q5T2S8 1044 aa11.28□□□□□ -0.6
SEC22C-209ENST00000449617 GKAP1Q5VSY0 366 aaPredicted RBP11.28□□□□□ -0.6
SEC22C-209ENST00000449617 OFCC1Q8IZS5 231 aa11.28□□□□□ -0.6
SEC22C-209ENST00000449617 GEMIN6Q8WXD5 167 aaKnown RBP11.28□□□□□ -0.6
SEC22C-209ENST00000449617 HOPXQ9BPY8 73 aaPredicted RBP11.28□□□□□ -0.6
SEC22C-209ENST00000449617 EFCAB1Q9HAE3 211 aa11.28□□□□□ -0.6
SEC22C-209ENST00000449617 MYOZ1Q9NP98 299 aaPredicted RBP11.28□□□□□ -0.6
SEC22C-209ENST00000449617 MAN2C1Q9NTJ4 1040 aa11.28□□□□□ -0.6
SEC22C-209ENST00000449617 RHCGQ9UBD6 479 aa11.28□□□□□ -0.6
SEC22C-209ENST00000449617 FBXO9Q9UK97 447 aaPredicted RBP11.28□□□□□ -0.6
SEC22C-209ENST00000449617 SPEF1Q9Y4P9 236 aa11.28□□□□□ -0.6
SEC22C-209ENST00000449617 CUBNO60494 3623 aa11.28□□□□□ -0.6
SEC22C-209ENST00000449617 LOC390937A0A1W2PQ73 354 aa11.27□□□□□ -0.6
SEC22C-209ENST00000449617 A8MV72 311 aaPredicted RBP11.27□□□□□ -0.6
SEC22C-209ENST00000449617 CENPBD1B2RD01 187 aa11.27□□□□□ -0.6
SEC22C-209ENST00000449617 NDUFS8O00217 210 aa11.27□□□□□ -0.6
SEC22C-209ENST00000449617 FFAR1O14842 300 aa11.27□□□□□ -0.6
SEC22C-209ENST00000449617 SERPINA5P05154 406 aa11.27□□□□□ -0.6
SEC22C-209ENST00000449617 IGFBP1P08833 259 aaPredicted RBP11.27□□□□□ -0.6
SEC22C-209ENST00000449617 IGHV4-31P0DP07 118 aa11.27□□□□□ -0.6
SEC22C-209ENST00000449617 ACADSP16219 412 aa11.27□□□□□ -0.6
SEC22C-209ENST00000449617 IFNA8P32881 189 aa11.27□□□□□ -0.6
SEC22C-209ENST00000449617 ZNF84P51523 738 aa11.27□□□□□ -0.6
SEC22C-209ENST00000449617 GALK2Q01415 458 aa11.27□□□□□ -0.6
SEC22C-209ENST00000449617 TOP3AQ13472 1001 aaPredicted RBP11.27□□□□□ -0.6
SEC22C-209ENST00000449617 LAPTM4AQ15012 233 aa11.27□□□□□ -0.6
SEC22C-209ENST00000449617 FXNQ16595 210 aa11.27□□□□□ -0.6
SEC22C-209ENST00000449617 HACD2Q6Y1H2 254 aa11.27□□□□□ -0.6
SEC22C-209ENST00000449617 MEX3DQ86XN8 651 aaKnown RBP11.27□□□□□ -0.6
SEC22C-209ENST00000449617 MRPL24Q96A35 216 aaKnown RBP11.27□□□□□ -0.6
SEC22C-209ENST00000449617 BPIFA2Q96DR5 249 aa11.27□□□□□ -0.6
SEC22C-209ENST00000449617 HSH2DQ96JZ2 352 aa11.27□□□□□ -0.6
SEC22C-209ENST00000449617 FOXN4Q96NZ1 517 aa11.27□□□□□ -0.6
SEC22C-209ENST00000449617 ELAC2Q9BQ52 826 aaKnown RBP11.27□□□□□ -0.6
SEC22C-209ENST00000449617 SYT3Q9BQG1 590 aa11.27□□□□□ -0.6
SEC22C-209ENST00000449617 FNDC11Q9BVV2 318 aa11.27□□□□□ -0.6
SEC22C-209ENST00000449617 MRPL37Q9BZE1 423 aaKnown RBP11.27□□□□□ -0.6
SEC22C-209ENST00000449617 FAM107BQ9H098 131 aa11.27□□□□□ -0.6
SEC22C-209ENST00000449617 FZR1Q9UM11 496 aa11.27□□□□□ -0.6
SEC22C-209ENST00000449617 HIF3AQ9Y2N7 669 aa11.27□□□□□ -0.6
SEC22C-209ENST00000449617 IGHV4-61A0A0C4DH41 118 aa11.26□□□□□ -0.61
SEC22C-209ENST00000449617 NPIPB13A6NJU9 1138 aa11.26□□□□□ -0.61
SEC22C-209ENST00000449617 NPIPB4C9JG80 1138 aa11.26□□□□□ -0.61
SEC22C-209ENST00000449617 SLC2A10O95528 541 aa11.26□□□□□ -0.61
SEC22C-209ENST00000449617 SERPINA1P01009 418 aa11.26□□□□□ -0.61
SEC22C-209ENST00000449617 ERCC1P07992 297 aaPredicted RBP11.26□□□□□ -0.61
SEC22C-209ENST00000449617 ADRA2AP08913 450 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms