RNA–Protein interactions for RNA: ENST00000443423.1

NEFMP1-201, Transcript of neurofilament medium pseudogene 1, humanhuman

BASIC

Gene NEFMP1, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP1-201ENST00000443423 TOP1P11387 765 aaKnown RBP2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 ADRB3P13945 408 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 AZU1P20160 251 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 FOXN2P32314 431 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 SERPINB5P36952 375 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 SSR4P51571 173 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 CCNHP51946 323 aaPredicted RBP2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 CDH6P55285 790 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 RPS21P63220 83 aaKnown RBP2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 BEX3Q00994 111 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 MECOMQ03112 1051 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 SMARCB1Q12824 385 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 SRSF5Q13243 272 aaKnown RBP2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 GUCA2BQ16661 112 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 ZBED5Q49AG3 693 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 PIGGQ5H8A4 983 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 LYPD2Q6UXB3 125 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 Q6ZSR3 168 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 CTAGE6Q86UF2 777 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 PDIK1LQ8N165 341 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 ARIH2OSQ8N7S6 290 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 OR4C5Q8NGB2 326 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 OR1S2Q8NGQ3 325 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 CD300LFQ8TDQ1 290 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 GIMAP1Q8WWP7 306 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 GEMIN6Q8WXD5 167 aaKnown RBP2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 ELMO1Q92556 727 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 TSSK3Q96PN8 268 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 ATP5SQ99766 215 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 CENPKQ9BS16 269 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 RACGAP1Q9H0H5 632 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 CWH43Q9H720 699 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 DEC1Q9P2X7 70 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 F11RQ9Y624 299 aaKnown RBP2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 USP47Q96K76 1375 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 NISCHQ9Y2I1 1504 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 BICRAQ9NZM4 1560 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 SRCAPQ6ZRS2 3230 aa2.06□□□□□ -2.08
NEFMP1-201ENST00000443423 CDC42BPBQ9Y5S2 1711 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 SMCO3A2RU48 225 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 PRSS37A4D1T9 235 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 CDC7O00311 574 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 SS18L1O75177 396 aaPredicted RBP2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 EEDO75530 441 aaKnown RBP2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 SLC25A27O95847 323 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 IGLV2-23P01705 113 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 ZNF24P17028 368 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 CNR1P21554 472 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 OMGP23515 440 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 OTX1P32242 354 aaPredicted RBP2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 CXCL5P42830 114 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 NSG1P42857 185 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 RORCP51449 518 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 YWHAGP61981 247 aaKnown RBP eCLIP2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 HMGCS1Q01581 520 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 TMEM183BQ1AE95 376 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 TTLL9Q3SXZ7 439 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 CARD17Q5XLA6 110 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 SLC8B1Q6J4K2 584 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 CERS6Q6ZMG9 384 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 ZNF836Q6ZNA1 936 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 TMEM179Q6ZVK1 233 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 ASCL5Q7RTU5 278 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 TMEM183AQ8IXX5 376 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 TTC5Q8N0Z6 440 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 BBS5Q8N3I7 341 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 GTPBP8Q8N3Z3 284 aaPredicted RBP2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 LIX1Q8N485 282 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 EID2Q8N6I1 236 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 Q8N9L7 120 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 FBXL13Q8NEE6 735 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 LKAAEAR1Q8TD35 194 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 ACTRT1Q8TDG2 376 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 CXorf40AQ8TE69 158 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 TMEM158Q8WZ71 300 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 SLC38A4Q969I6 547 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 DNAJC19Q96DA6 116 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 PIK3IP1Q96FE7 263 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 ZNF414Q96IQ9 312 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 ZNF578Q96N58 590 aaPredicted RBP2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 GABARAPL3Q9BY60 117 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 LINC00597Q9H2U6 94 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 LSM7Q9UK45 103 aaKnown RBP2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 WSB1Q9Y6I7 421 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 CEMIPQ8WUJ3 1361 aa2.05□□□□□ -2.08
NEFMP1-201ENST00000443423 IGLV11-55A0A075B6I3 123 aa2.04□□□□□ -2.08
NEFMP1-201ENST00000443423 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.04□□□□□ -2.08
NEFMP1-201ENST00000443423 TRBV11-1A0A0K0K1C0 115 aa2.04□□□□□ -2.08
NEFMP1-201ENST00000443423 PLAC8L1A1L4L8 177 aa2.04□□□□□ -2.08
NEFMP1-201ENST00000443423 TCP11X1B4DZS4 312 aa2.04□□□□□ -2.08
NEFMP1-201ENST00000443423 CLOCKO15516 846 aa2.04□□□□□ -2.08
NEFMP1-201ENST00000443423 WDR62O43379 1518 aa2.04□□□□□ -2.08
NEFMP1-201ENST00000443423 NFASCO94856 1347 aa2.04□□□□□ -2.08
NEFMP1-201ENST00000443423 TSPAN13O95857 204 aa2.04□□□□□ -2.08
NEFMP1-201ENST00000443423 PABPC4LP0CB38 370 aaKnown RBP2.04□□□□□ -2.08
NEFMP1-201ENST00000443423 ZNF30P17039 623 aa2.04□□□□□ -2.08
NEFMP1-201ENST00000443423 AK4P27144 223 aaPredicted RBP2.04□□□□□ -2.08
NEFMP1-201ENST00000443423 HOXA9P31269 272 aa2.04□□□□□ -2.08
NEFMP1-201ENST00000443423 NAA10P41227 235 aaPredicted RBP2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms