RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 BCL2L11O43521 198 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 RAB3DO95716 219 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 AK1P00568 194 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 CSN2P05814 226 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 ITGA5P08648 1049 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 BDKRB2P30411 391 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 DLSTP36957 453 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 HOXA1P49639 335 aaPredicted RBP12.7□□□□□ -0.38
APOB-202ENST00000399256 PGDP52209 483 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 PSMD4P55036 377 aaKnown RBP12.7□□□□□ -0.38
APOB-202ENST00000399256 NNATQ16517 81 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 ARHGAP40Q5TG30 622 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 SPRED2Q7Z698 418 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 C10orf53Q8N6V4 93 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 ZNF417Q8TAU3 575 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 ESRP2Q9H6T0 727 aaKnown RBP12.7□□□□□ -0.38
APOB-202ENST00000399256 LINC01553A4QN01 128 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 ABHD16AO95870 558 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 GPANK1O95872 356 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 SMIM10L1P0DMW3 83 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 MAP3K8P41279 467 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 NR0B2Q15466 257 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 GAB4Q2WGN9 574 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 C2orf76Q3KRA6 126 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 C9orf50Q5SZB4 431 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 LIN54Q6MZP7 749 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 OR2G2Q8NGZ5 317 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 TSEN15Q8WW01 171 aaKnown RBP12.69□□□□□ -0.38
APOB-202ENST00000399256 SMIM10Q96HG1 83 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 OR2A5Q96R48 311 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 COMMD4Q9H0A8 199 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 C1orf198Q9H425 327 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 SCPEP1Q9HB40 452 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 GPN3Q9UHW5 284 aaPredicted RBP12.69□□□□□ -0.38
APOB-202ENST00000399256 TNFSF18Q9UNG2 199 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 NOP16Q9Y3C1 178 aaKnown RBP12.69□□□□□ -0.38
APOB-202ENST00000399256 A0A1W2PP55 124 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 OR4C45A6NMZ5 311 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 GPR89AB7ZAQ6 455 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 ARPC3O15145 178 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 KCNAB3O43448 404 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 AMY2AP04746 511 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 GPR89BP0CG08 455 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 GPR143P51810 404 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 SCGB2B2Q4G0G5 96 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 LRRC69Q6ZNQ3 347 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 ZNF627Q7L945 461 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 OR6N2Q8NGY6 317 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 DPP7Q9UHL4 492 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 LAMP5Q9UJQ1 280 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 LHX6Q9UPM6 363 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 MRPS23Q9Y3D9 190 aaKnown RBP12.69□□□□□ -0.38
APOB-202ENST00000399256 CHD7Q9P2D1 2997 aa12.69□□□□□ -0.38
APOB-202ENST00000399256 TRBV5-7A0A0A0MS05 114 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 ALOX12BO75342 701 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 GPR75O95800 540 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 MYOGP15173 224 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 ADCYAP1P18509 176 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 CD34P28906 385 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 SRSF5Q13243 272 aaKnown RBP12.68□□□□□ -0.38
APOB-202ENST00000399256 SNTB1Q13884 538 aaKnown RBP12.68□□□□□ -0.38
APOB-202ENST00000399256 MANEAQ5SRI9 462 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 C11orf87Q6NUJ2 197 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 CCDC36Q8IYA8 594 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 PRSS35Q8N3Z0 413 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 OR5M8Q8NGP6 311 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 FAM3DQ96BQ1 224 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 PIGMQ9H3S5 423 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 SFXN1Q9H9B4 322 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 ZMAT3Q9HA38 289 aaKnown RBP12.68□□□□□ -0.38
APOB-202ENST00000399256 COMMD9Q9P000 198 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 UPB1Q9UBR1 384 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 TBC1D29Q9UFV1 150 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 FARSAQ9Y285 508 aaKnown RBP12.68□□□□□ -0.38
APOB-202ENST00000399256 RNF222A6NCQ9 220 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 LINC01387J3KSC0 135 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 SRPX2O60687 465 aaPredicted RBP12.68□□□□□ -0.38
APOB-202ENST00000399256 NKX2-2O95096 273 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 F13BP05160 661 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 PVALBP20472 110 aaPredicted RBP12.68□□□□□ -0.38
APOB-202ENST00000399256 ATP1B3P54709 279 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 PSG6Q00889 435 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 CCDC157Q569K6 752 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 FAM109BQ6ICB4 259 aaPredicted RBP12.68□□□□□ -0.38
APOB-202ENST00000399256 ZCCHC12Q6PEW1 402 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 UNQ6126/PRO20091Q6UXV3 157 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 ZNF595Q8IYB9 648 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 OR10G6Q8NH81 332 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 GPR148Q8TDV2 347 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 TM4SF19Q96DZ7 209 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 FAM117AQ9C073 453 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 SRMSQ9H3Y6 488 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 GTF2A1LQ9UNN4 478 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 KCNK7Q9Y2U2 307 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 MUC22E2RYF6 1773 aaPredicted RBP12.68□□□□□ -0.38
APOB-202ENST00000399256 LOC100509620A0A075B734 347 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 TMEM218A2RU14 115 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 ELOA3DA6NLF2 546 aaPredicted RBP12.68□□□□□ -0.38
APOB-202ENST00000399256 FAM25EA8MYX2 175 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 CDC40O60508 579 aaKnown RBP eCLIP12.68□□□□□ -0.382e-15■■□□□ 11.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms