RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 INTS9Q9NV88 658 aaKnown RBP12.7□□□□□ -0.38
HDAC6-204ENST00000376643 MALRD1Q5VYJ5 2156 aa12.7□□□□□ -0.38
HDAC6-204ENST00000376643 IQCMA0A1B0GVH7 501 aa12.69□□□□□ -0.38
HDAC6-204ENST00000376643 A0A1W2PRG6 482 aa12.69□□□□□ -0.38
HDAC6-204ENST00000376643 CPSF4LA6NMK7 179 aaKnown RBP12.69□□□□□ -0.38
HDAC6-204ENST00000376643 MCIDASD6RGH6 385 aa12.69□□□□□ -0.38
HDAC6-204ENST00000376643 DHHO43323 396 aa12.69□□□□□ -0.38
HDAC6-204ENST00000376643 CH25HO95992 272 aa12.69□□□□□ -0.38
HDAC6-204ENST00000376643 IFNA14P01570 189 aa12.69□□□□□ -0.38
HDAC6-204ENST00000376643 SAGP10523 405 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-204ENST00000376643 RAD52P43351 418 aa12.69□□□□□ -0.38
HDAC6-204ENST00000376643 DAP3P51398 398 aaKnown RBP12.69□□□□□ -0.38
HDAC6-204ENST00000376643 CLRN1P58418 232 aa12.69□□□□□ -0.38
HDAC6-204ENST00000376643 NFYCQ13952 458 aa12.69□□□□□ -0.38
HDAC6-204ENST00000376643 NKPD1Q17RQ9 610 aa12.69□□□□□ -0.38
HDAC6-204ENST00000376643 METTL21CQ5VZV1 264 aa12.69□□□□□ -0.38
HDAC6-204ENST00000376643 SHQ1Q6PI26 577 aaKnown RBP12.69□□□□□ -0.38
HDAC6-204ENST00000376643 NHLRC1Q6VVB1 395 aa12.69□□□□□ -0.38
HDAC6-204ENST00000376643 C1orf174Q8IYL3 243 aa12.69□□□□□ -0.38
HDAC6-204ENST00000376643 ZCCHC24Q8N2G6 241 aaKnown RBP12.69□□□□□ -0.38
HDAC6-204ENST00000376643 C10orf111Q8N326 155 aa12.69□□□□□ -0.38
HDAC6-204ENST00000376643 SLC30A7Q8NEW0 376 aa12.69□□□□□ -0.38
HDAC6-204ENST00000376643 OR6T1Q8NGN1 323 aa12.69□□□□□ -0.38
HDAC6-204ENST00000376643 ZNF75AQ96N20 296 aa12.69□□□□□ -0.38
HDAC6-204ENST00000376643 SYT3Q9BQG1 590 aa12.69□□□□□ -0.38
HDAC6-204ENST00000376643 TMEM38BQ9NVV0 291 aa12.69□□□□□ -0.38
HDAC6-204ENST00000376643 DUSP13Q9UII6 198 aa12.69□□□□□ -0.38
HDAC6-204ENST00000376643 METRNQ9UJH8 293 aa12.69□□□□□ -0.38
HDAC6-204ENST00000376643 BAG5Q9UL15 447 aa12.69□□□□□ -0.38
HDAC6-204ENST00000376643 SLC7A7Q9UM01 511 aa12.69□□□□□ -0.38
HDAC6-204ENST00000376643 HTR3EA5X5Y0 456 aa12.68□□□□□ -0.38
HDAC6-204ENST00000376643 HMGB1P1B2RPK0 211 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-204ENST00000376643 TPST2O60704 377 aa12.68□□□□□ -0.38
HDAC6-204ENST00000376643 SNAP29O95721 258 aa12.68□□□□□ -0.38
HDAC6-204ENST00000376643 IGF2P01344 180 aa12.68□□□□□ -0.38
HDAC6-204ENST00000376643 IFNA8P32881 189 aa12.68□□□□□ -0.38
HDAC6-204ENST00000376643 RBM34P42696 430 aaKnown RBP12.68□□□□□ -0.38
HDAC6-204ENST00000376643 KLF3P57682 345 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-204ENST00000376643 CYLC2Q14093 348 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-204ENST00000376643 RAB39AQ14964 217 aa12.68□□□□□ -0.38
HDAC6-204ENST00000376643 DUSP7Q16829 419 aa12.68□□□□□ -0.38
HDAC6-204ENST00000376643 TMEM154Q6P9G4 183 aa12.68□□□□□ -0.38
HDAC6-204ENST00000376643 SLC16A14Q7RTX9 510 aa12.68□□□□□ -0.38
HDAC6-204ENST00000376643 PTOV1Q86YD1 416 aa12.68□□□□□ -0.38
HDAC6-204ENST00000376643 OR51F2Q8NH61 342 aa12.68□□□□□ -0.38
HDAC6-204ENST00000376643 ZFAND2BQ8WV99 257 aa12.68□□□□□ -0.38
HDAC6-204ENST00000376643 C11orf40Q8WZ69 217 aa12.68□□□□□ -0.38
HDAC6-204ENST00000376643 KAT8Q9H7Z6 458 aaKnown RBP12.68□□□□□ -0.38
HDAC6-204ENST00000376643 LRRN3E7EW58 273 aa12.67□□□□□ -0.38
HDAC6-204ENST00000376643 OPN1SWP03999 348 aa12.67□□□□□ -0.38
HDAC6-204ENST00000376643 ASAH2BP0C7U1 165 aa12.67□□□□□ -0.38
HDAC6-204ENST00000376643 PGA4P0DJD7 388 aa12.67□□□□□ -0.38
HDAC6-204ENST00000376643 PGA3P0DJD8 388 aa12.67□□□□□ -0.38
HDAC6-204ENST00000376643 ALDH3B1P43353 468 aa12.67□□□□□ -0.38
HDAC6-204ENST00000376643 MTPNP58546 118 aa12.67□□□□□ -0.38
HDAC6-204ENST00000376643 ELFN2Q5R3F8 820 aa12.67□□□□□ -0.38
HDAC6-204ENST00000376643 ERICH5Q6P6B1 374 aa12.67□□□□□ -0.38
HDAC6-204ENST00000376643 DEF8Q6ZN54 512 aa12.67□□□□□ -0.38
HDAC6-204ENST00000376643 LSRQ86X29 649 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-204ENST00000376643 SKA3Q8IX90 412 aa12.67□□□□□ -0.38
HDAC6-204ENST00000376643 RBM15BQ8NDT2 890 aaKnown RBP12.67□□□□□ -0.38
HDAC6-204ENST00000376643 CPEB3Q8NE35 698 aaKnown RBP12.67□□□□□ -0.38
HDAC6-204ENST00000376643 VANGL1Q8TAA9 524 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-204ENST00000376643 ZNF519Q8TB69 540 aa12.67□□□□□ -0.38
HDAC6-204ENST00000376643 SYNPRQ8TBG9 265 aa12.67□□□□□ -0.38
HDAC6-204ENST00000376643 FNDC8Q8TC99 324 aa12.67□□□□□ -0.38
HDAC6-204ENST00000376643 TMEM186Q96B77 213 aa12.67□□□□□ -0.38
HDAC6-204ENST00000376643 RAB39BQ96DA2 213 aa12.67□□□□□ -0.38
HDAC6-204ENST00000376643 MAGEB18Q96M61 343 aa12.67□□□□□ -0.38
HDAC6-204ENST00000376643 ZNF426Q9BUY5 554 aa12.67□□□□□ -0.38
HDAC6-204ENST00000376643 RSPO3Q9BXY4 272 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-204ENST00000376643 NKIRAS2Q9NYR9 191 aa12.67□□□□□ -0.38
HDAC6-204ENST00000376643 TAS2R5Q9NYW4 299 aa12.67□□□□□ -0.38
HDAC6-204ENST00000376643 ZNF224Q9NZL3 707 aa12.67□□□□□ -0.38
HDAC6-204ENST00000376643 KPNA4O00629 521 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-204ENST00000376643 PPIHO43447 177 aaKnown RBP12.66□□□□□ -0.38
HDAC6-204ENST00000376643 NPPAP01160 153 aa12.66□□□□□ -0.38
HDAC6-204ENST00000376643 MSMBP08118 114 aa12.66□□□□□ -0.38
HDAC6-204ENST00000376643 QDPRP09417 244 aa12.66□□□□□ -0.38
HDAC6-204ENST00000376643 THRBP10828 461 aa12.66□□□□□ -0.38
HDAC6-204ENST00000376643 DRD4P21917 467 aa12.66□□□□□ -0.38
HDAC6-204ENST00000376643 APLNRP35414 380 aa12.66□□□□□ -0.38
HDAC6-204ENST00000376643 GUCA1AP43080 201 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-204ENST00000376643 TAS2R41P59536 307 aa12.66□□□□□ -0.38
HDAC6-204ENST00000376643 HSF2Q03933 536 aa12.66□□□□□ -0.38
HDAC6-204ENST00000376643 CCNIQ14094 377 aa12.66□□□□□ -0.38
HDAC6-204ENST00000376643 TAF11Q15544 211 aa12.66□□□□□ -0.38
HDAC6-204ENST00000376643 TRIP10Q15642 601 aa12.66□□□□□ -0.38
HDAC6-204ENST00000376643 VMACQ2NL98 169 aa12.66□□□□□ -0.38
HDAC6-204ENST00000376643 CCDC80Q76M96 950 aa12.66□□□□□ -0.38
HDAC6-204ENST00000376643 NOXO1Q8NFA2 376 aa12.66□□□□□ -0.38
HDAC6-204ENST00000376643 GPR32P1Q8NGA4 272 aa12.66□□□□□ -0.38
HDAC6-204ENST00000376643 OR4K5Q8NGD3 323 aa12.66□□□□□ -0.38
HDAC6-204ENST00000376643 OR10A6Q8NH74 314 aa12.66□□□□□ -0.38
HDAC6-204ENST00000376643 SOX7Q9BT81 388 aa12.66□□□□□ -0.38
HDAC6-204ENST00000376643 SMURF2Q9HAU4 748 aa12.66□□□□□ -0.38
HDAC6-204ENST00000376643 HINT3Q9NQE9 182 aaKnown RBP12.66□□□□□ -0.38
HDAC6-204ENST00000376643 TRAV20A0A0B4J274 112 aa12.65□□□□□ -0.38
HDAC6-204ENST00000376643 NPIPB13A6NJU9 1138 aa12.65□□□□□ -0.38
HDAC6-204ENST00000376643 C17orf100A8MU93 164 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms