RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 KCNK17Q96T54 332 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 FOXB1Q99853 325 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 IFT27Q9BW83 186 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 OBP2BQ9NPH6 170 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 TBC1D23Q9NUY8 699 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 PDP1Q9P0J1 537 aaPredicted RBP13□□□□□ -0.33
COL9A1-204ENST00000370496 KIF17Q9P2E2 1029 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 MGAT4BQ9UQ53 548 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 AP4S1Q9Y587 144 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 SLC25A15Q9Y619 301 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 CDH10Q9Y6N8 788 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 DCHS2Q6V1P9 2916 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 H7C1C5 153 aa12.99□□□□□ -0.33
COL9A1-204ENST00000370496 SOCS2O14508 198 aa12.99□□□□□ -0.33
COL9A1-204ENST00000370496 ARHGEF9O43307 516 aa12.99□□□□□ -0.33
COL9A1-204ENST00000370496 ENTPD5O75356 428 aa12.99□□□□□ -0.33
COL9A1-204ENST00000370496 SLC2A10O95528 541 aa12.99□□□□□ -0.33
COL9A1-204ENST00000370496 GASTP01350 101 aa12.99□□□□□ -0.33
COL9A1-204ENST00000370496 GSTM3P21266 225 aa12.99□□□□□ -0.33
COL9A1-204ENST00000370496 FASP25445 335 aa12.99□□□□□ -0.33
COL9A1-204ENST00000370496 ACTR3P61158 418 aa12.99□□□□□ -0.33
COL9A1-204ENST00000370496 LCN6P62502 163 aa12.99□□□□□ -0.33
COL9A1-204ENST00000370496 FMODQ06828 376 aa12.99□□□□□ -0.33
COL9A1-204ENST00000370496 RFX4Q33E94 735 aa12.99□□□□□ -0.33
COL9A1-204ENST00000370496 MESTQ5EB52 335 aa12.99□□□□□ -0.33
COL9A1-204ENST00000370496 CLEC12AQ5QGZ9 265 aa12.99□□□□□ -0.33
COL9A1-204ENST00000370496 SEZ6L2Q6UXD5 910 aa12.99□□□□□ -0.33
COL9A1-204ENST00000370496 FAM122BQ7Z309 247 aa12.99□□□□□ -0.33
COL9A1-204ENST00000370496 CLDN22Q8N7P3 220 aa12.99□□□□□ -0.33
COL9A1-204ENST00000370496 FNDC8Q8TC99 324 aa12.99□□□□□ -0.33
COL9A1-204ENST00000370496 NANOS1Q8WY41 292 aaKnown RBP12.99□□□□□ -0.33
COL9A1-204ENST00000370496 BCL2L2Q92843 193 aaPredicted RBP12.99□□□□□ -0.33
COL9A1-204ENST00000370496 MCHR2Q969V1 340 aa12.99□□□□□ -0.33
COL9A1-204ENST00000370496 SAMD8Q96LT4 415 aa12.99□□□□□ -0.33
COL9A1-204ENST00000370496 DGCR6LQ9BY27 220 aa12.99□□□□□ -0.33
COL9A1-204ENST00000370496 MRPL13Q9BYD1 178 aaKnown RBP12.99□□□□□ -0.33
COL9A1-204ENST00000370496 NELFAQ9H3P2 528 aa12.99□□□□□ -0.33
COL9A1-204ENST00000370496 EGLN3Q9H6Z9 239 aa12.99□□□□□ -0.33
COL9A1-204ENST00000370496 ZNF556Q9HAH1 456 aa12.99□□□□□ -0.33
COL9A1-204ENST00000370496 NRIP3Q9NQ35 241 aa12.99□□□□□ -0.33
COL9A1-204ENST00000370496 ARMC1Q9NVT9 282 aa12.99□□□□□ -0.33
COL9A1-204ENST00000370496 ARPC4-TTLL3A0A0A6YYG9 625 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 M0R1B8 84 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 DHHO43323 396 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 SOX14O95416 240 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 NOS3P29474 1203 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 TUBA1BP68363 451 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 TUBA4AP68366 448 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 BSPH1Q075Z2 132 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 ATP6AP1Q15904 470 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 HIST3H3Q16695 136 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 C1QTNF12Q5T7M4 302 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 LRFN4Q6PJG9 635 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 TMEM108Q6UXF1 575 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 RASSF6Q6ZTQ3 369 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 TUBA1AQ71U36 451 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 TMEM179BQ7Z7N9 219 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 ADCK1Q86TW2 530 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 JAZF1Q86VZ6 243 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 WDR31Q8NA23 367 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 ATG16L2Q8NAA4 619 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 PYDC1Q8WXC3 89 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 NSMAFQ92636 917 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 DUS3LQ96G46 650 aaKnown RBP12.98□□□□□ -0.33
COL9A1-204ENST00000370496 BOD1Q96IK1 185 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 ERMAPQ96PL5 475 aaPredicted RBP12.98□□□□□ -0.33
COL9A1-204ENST00000370496 HS3ST6Q96QI5 342 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 RBP7Q96R05 134 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 FEVQ99581 238 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 DENND2DQ9H6A0 471 aaPredicted RBP12.98□□□□□ -0.33
COL9A1-204ENST00000370496 SMURF2Q9HAU4 748 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 NPAP1Q9NZP6 1156 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 IER3IP1Q9Y5U9 82 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 FBN2P35556 2912 aa12.98□□□□□ -0.33
COL9A1-204ENST00000370496 FAM221AA4D161 298 aa12.97□□□□□ -0.33
COL9A1-204ENST00000370496 FARS2O95363 451 aaKnown RBP12.97□□□□□ -0.33
COL9A1-204ENST00000370496 CD3EP07766 207 aa12.97□□□□□ -0.33
COL9A1-204ENST00000370496 APEHP13798 732 aaKnown RBP12.97□□□□□ -0.33
COL9A1-204ENST00000370496 KRTAP10-9P60411 292 aa12.97□□□□□ -0.33
COL9A1-204ENST00000370496 ZSCAN26Q16670 478 aa12.97□□□□□ -0.33
COL9A1-204ENST00000370496 THEM4Q5T1C6 240 aa12.97□□□□□ -0.33
COL9A1-204ENST00000370496 C10orf128Q5T292 105 aa12.97□□□□□ -0.33
COL9A1-204ENST00000370496 SHQ1Q6PI26 577 aaKnown RBP12.97□□□□□ -0.33
COL9A1-204ENST00000370496 CDC20BQ86Y33 519 aa12.97□□□□□ -0.33
COL9A1-204ENST00000370496 HS3ST5Q8IZT8 346 aa12.97□□□□□ -0.33
COL9A1-204ENST00000370496 TEX47Q8TBZ9 253 aa12.97□□□□□ -0.33
COL9A1-204ENST00000370496 LURAP1Q96LR2 239 aa12.97□□□□□ -0.33
COL9A1-204ENST00000370496 NIPSNAP1Q9BPW8 284 aa12.97□□□□□ -0.33
COL9A1-204ENST00000370496 BDH2Q9BUT1 245 aa12.97□□□□□ -0.33
COL9A1-204ENST00000370496 C1QTNF6Q9BXI9 259 aa12.97□□□□□ -0.33
COL9A1-204ENST00000370496 MOV10Q9HCE1 1003 aaKnown RBP12.97□□□□□ -0.33
COL9A1-204ENST00000370496 TMEM38BQ9NVV0 291 aa12.97□□□□□ -0.33
COL9A1-204ENST00000370496 RNF115Q9Y4L5 304 aa12.97□□□□□ -0.33
COL9A1-204ENST00000370496 ABCA12Q86UK0 2595 aa12.97□□□□□ -0.33
COL9A1-204ENST00000370496 CACNA1DQ01668 2161 aa12.96□□□□□ -0.33
COL9A1-204ENST00000370496 ALPK2Q86TB3 2170 aa12.96□□□□□ -0.33
COL9A1-204ENST00000370496 A0A1W2PPL8 197 aa12.96□□□□□ -0.33
COL9A1-204ENST00000370496 PRSS37A4D1T9 235 aa12.96□□□□□ -0.33
COL9A1-204ENST00000370496 H3BN98 237 aa12.96□□□□□ -0.33
COL9A1-204ENST00000370496 CD79AP11912 226 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms