RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 RAB3CQ96E17 227 aa13.4□□□□□ -0.26
SLC6A20-202ENST00000358525 SGCZQ96LD1 299 aa13.4□□□□□ -0.26
SLC6A20-202ENST00000358525 RPP25Q9BUL9 199 aaKnown RBP13.4□□□□□ -0.26
SLC6A20-202ENST00000358525 KCNIP1Q9NZI2 227 aa13.4□□□□□ -0.26
SLC6A20-202ENST00000358525 ZNF346Q9UL40 294 aaKnown RBP13.4□□□□□ -0.26
SLC6A20-202ENST00000358525 GPR55Q9Y2T6 319 aaPredicted RBP13.4□□□□□ -0.26
SLC6A20-202ENST00000358525 PRAMEF25A6NGN4 478 aa13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 VSTM5A8MXK1 200 aa13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 HTR5AP47898 357 aa13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 PCBP4P57723 403 aaKnown RBP13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 EXOSC6Q5RKV6 272 aaKnown RBP13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 Q6ZTK2 550 aa13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 H1FNTQ75WM6 255 aaPredicted RBP13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 NIPAL2Q9H841 368 aa13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 DPM1O60762 260 aa13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 APEHP13798 732 aaKnown RBP13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 SPNP16150 400 aa13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 RPL18Q07020 188 aaKnown RBP13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 YOD1Q5VVQ6 348 aaPredicted RBP13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 SLC16A12Q6ZSM3 486 aa13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 FAM109AQ8N4B1 249 aa13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 SIRT6Q8N6T7 355 aa13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 OR4N2Q8NGD1 307 aa13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 RRNAD1Q96FB5 475 aaKnown RBP13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 EMC6Q9BV81 110 aa13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 TCEAL2Q9H3H9 227 aaPredicted RBP13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 GAREM1Q9H706 876 aa13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 SLAMF7Q9NQ25 335 aa13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 SLC33A1O00400 549 aaPredicted RBP13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 UBCP0CG48 685 aaKnown RBP13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 SLC16A14Q7RTX9 510 aa13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 SMIM3Q9BZL3 60 aa13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 EMC7Q9NPA0 242 aa13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 NFYAP23511 347 aaPredicted RBP13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 PPICP45877 212 aa13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 GABREP78334 506 aa13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 CDC20Q12834 499 aa13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 HTR4Q13639 388 aa13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 KIRREL2Q6UWL6 708 aa13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 ZSCAN1Q8NBB4 408 aa13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 OR4Q3Q8NH05 313 aa13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 OR52I2Q8NH67 350 aa13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 CCDC74AQ96AQ1 378 aa13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 VRK1Q99986 396 aaPredicted RBP13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 GPATCH2Q9NW75 528 aa13.39□□□□□ -0.27
SLC6A20-202ENST00000358525 A0A1W2PPC4 97 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 TPT1P13693 172 aaKnown RBP13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 EVX1P49640 407 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 SEC61A1P61619 476 aaKnown RBP13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 OTPQ5XKR4 325 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 RDH10Q8IZV5 341 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 C10orf111Q8N326 155 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 SLC22A24Q8N4F4 322 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 OR56B1Q8NGI3 324 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 EDAQ92838 391 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 RSPRY1Q96DX4 576 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 OR11A1Q9GZK7 315 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 KLHL13Q9P2N7 655 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 PCDHGA1Q9Y5H4 931 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 F10P00742 488 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 SLC2A1P11166 492 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 ATP1B3P54709 279 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 MTCP1P56278 107 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 BDH1Q02338 343 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 MPEG1Q2M385 716 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 ADGRE4PQ86SQ3 457 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 GLCCI1Q86VQ1 547 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 PAQR8Q8TEZ7 354 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 SMCO3A2RU48 225 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 PRSS23O95084 383 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 TSPAN15O95858 294 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 ANXA7P20073 488 aaKnown RBP13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 PCMT1P22061 227 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 ACKR1Q16570 336 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 CNTNAP3BQ96NU0 1288 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 ANKRD30BLA7E2S9 258 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 B4DXG7 233 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 NUPL2O15504 423 aaKnown RBP13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 ZNF93P35789 620 aaPredicted RBP13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 ARG2P78540 354 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 NKAIN1Q4KMZ8 207 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 TMEM201Q5SNT2 666 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 FAM27D1Q5T7N8 215 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 HEPHL1Q6MZM0 1159 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 CMTM1Q8IZ96 169 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 OR6M1Q8NGM8 313 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 STK35Q8TDR2 534 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 APH1BQ8WW43 257 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 ZG16BQ96DA0 208 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 OR2A14Q96R47 310 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 DCLRE1CQ96SD1 692 aaKnown RBP13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 WIF1Q9Y5W5 379 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 H3BUI4 141 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 SULT1B1O43704 296 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 TBX19O60806 448 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 SIX6O95475 246 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 TUBG1P23258 451 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 BTG1P62324 171 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 METTL9Q9H1A3 318 aa13.38□□□□□ -0.27
SLC6A20-202ENST00000358525 ANKRD10Q9NXR5 420 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms