RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 ZNF565Q8N9K5 539 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 TSPAN10Q9H1Z9 355 aaPredicted RBP12.34□□□□□ -0.43
HPS3-201ENST00000296051 FOCADQ5VW36 1801 aa12.34□□□□□ -0.43
HPS3-201ENST00000296051 UNC13CQ8NB66 2214 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 A0A1B0GWA3 101 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 FITM1A5D6W6 292 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 POU3F3P20264 500 aaPredicted RBP12.33□□□□□ -0.44
HPS3-201ENST00000296051 MAOAP21397 527 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 SLC9A3R2Q15599 337 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 ZNF620Q6ZNG0 422 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 TMUB2Q71RG4 321 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 MFSD9Q8NBP5 474 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 ZNF417Q8TAU3 575 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 NECAB3Q96P71 396 aaPredicted RBP12.33□□□□□ -0.44
HPS3-201ENST00000296051 TSSK2Q96PF2 358 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 ENKD1Q9H0I2 346 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 PAPPA2Q9BXP8 1791 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 A0A1B0GX78 115 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 TNFSF12O43508 249 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 CHP2O43745 196 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 MRPL33O75394 65 aaKnown RBP12.33□□□□□ -0.44
HPS3-201ENST00000296051 TUBG1P23258 451 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 SLC6A8P48029 635 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 CSNK2A1P68400 391 aaPredicted RBP12.33□□□□□ -0.44
HPS3-201ENST00000296051 MLC1Q15049 377 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 AGERQ15109 404 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 DUSP5Q16690 384 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 METRNLQ641Q3 311 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 CMTM4Q8IZR5 234 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 PLPP7Q8NBV4 271 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 ALG12Q9BV10 488 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 PTDSS2Q9BVG9 487 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 LSM5Q9Y4Y9 91 aaKnown RBP12.33□□□□□ -0.44
HPS3-201ENST00000296051 MKRN2OSH3BPM6 223 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 APOC1P02654 83 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 CCR5P51681 352 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 HENMT1Q5T8I9 393 aaKnown RBP12.33□□□□□ -0.44
HPS3-201ENST00000296051 OR14A16Q8NHC5 309 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 TOMM40LQ969M1 308 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 C8orf44Q96CB5 159 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 Q96M85 177 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 ABHD1Q96SE0 405 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 PITHD1Q9GZP4 211 aaPredicted RBP12.33□□□□□ -0.44
HPS3-201ENST00000296051 PARP12Q9H0J9 701 aaKnown RBP12.33□□□□□ -0.44
HPS3-201ENST00000296051 TMEM231Q9H6L2 316 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 LUZP4Q9P127 313 aa12.33□□□□□ -0.44
HPS3-201ENST00000296051 C2orf72A6NCS6 295 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 FAM166BA8MTA8 275 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 M0R296 226 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 SLC16A7O60669 478 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 UBBP0CG47 229 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 UBCP0CG48 685 aaKnown RBP12.32□□□□□ -0.44
HPS3-201ENST00000296051 RAB38P57729 211 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 TNFRSF17Q02223 184 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 VWA2Q5GFL6 755 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 PXT1Q8NFP0 134 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 KLHL15Q96M94 604 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 VRK1Q99986 396 aaPredicted RBP12.32□□□□□ -0.44
HPS3-201ENST00000296051 ST6GALNAC5Q9BVH7 336 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 ELOVL3Q9HB03 270 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 MED17Q9NVC6 651 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 A4GNTQ9UNA3 340 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 NPFFR2Q9Y5X5 522 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 XIRP1Q702N8 1843 aaKnown RBP12.32□□□□□ -0.44
HPS3-201ENST00000296051 ERVH48-1M5A8F1 160 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 DDAH2O95865 285 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 SEC61A1P61619 476 aaKnown RBP12.32□□□□□ -0.44
HPS3-201ENST00000296051 VAMP2P63027 116 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 IRF3Q14653 427 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 C1orf53Q5VUE5 145 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 WASF3Q9UPY6 502 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.32□□□□□ -0.44
HPS3-201ENST00000296051 AGAP14A8MT82 685 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 KLRC4-KLRK1H3BQV0 150 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 ALOX12BO75342 701 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 ST6GAL1P15907 406 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 DPP4P27487 766 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 APLNRP35414 380 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 BCL6P41182 706 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 GLP1RP43220 463 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 GFERP55789 205 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 CLPPQ16740 277 aaPredicted RBP12.32□□□□□ -0.44
HPS3-201ENST00000296051 CHRFAM7AQ494W8 412 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 AMER3Q8N944 861 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 PRMT8Q9NR22 394 aaPredicted RBP12.32□□□□□ -0.44
HPS3-201ENST00000296051 SPTBN1Q01082 2364 aaKnown RBP12.32□□□□□ -0.44
HPS3-201ENST00000296051 KDM4EB2RXH2 506 aaPredicted RBP12.32□□□□□ -0.44
HPS3-201ENST00000296051 IDSB3KWA1 339 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 ZNF593O00488 134 aaPredicted RBP12.32□□□□□ -0.44
HPS3-201ENST00000296051 RAB40ALP0C0E4 278 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 CSNK1A1P48729 337 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 CAMK2BQ13554 666 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 ZNF529Q6P280 563 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 CD300LGQ6UXG3 332 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 RAB40AQ8WXH6 277 aa12.32□□□□□ -0.44
HPS3-201ENST00000296051 SENP5Q96HI0 755 aaPredicted RBP12.32□□□□□ -0.44
HPS3-201ENST00000296051 GAPDHSO14556 408 aaPredicted RBP12.31□□□□□ -0.44
HPS3-201ENST00000296051 CD1CP29017 333 aa12.31□□□□□ -0.44
HPS3-201ENST00000296051 PPT1P50897 306 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms