RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 OR4A8P0C604 315 aa12.48□□□□□ -0.41
HMGN3-201ENST00000275036 IFI30P13284 250 aa12.48□□□□□ -0.41
HMGN3-201ENST00000275036 THBS4P35443 961 aa12.48□□□□□ -0.41
HMGN3-201ENST00000275036 SERPINF1P36955 418 aa12.48□□□□□ -0.41
HMGN3-201ENST00000275036 GIPRP48546 466 aa12.48□□□□□ -0.41
HMGN3-201ENST00000275036 CHRNB3Q05901 458 aa12.48□□□□□ -0.41
HMGN3-201ENST00000275036 FHL1Q13642 323 aa12.48□□□□□ -0.41
HMGN3-201ENST00000275036 RAB35Q15286 201 aa12.48□□□□□ -0.41
HMGN3-201ENST00000275036 ARMC4Q5T2S8 1044 aa12.48□□□□□ -0.41
HMGN3-201ENST00000275036 PIWIL3Q7Z3Z3 882 aaKnown RBP12.48□□□□□ -0.41
HMGN3-201ENST00000275036 PIGWQ7Z7B1 504 aa12.48□□□□□ -0.41
HMGN3-201ENST00000275036 NRMQ8IXM6 262 aa12.48□□□□□ -0.41
HMGN3-201ENST00000275036 SLC22A24Q8N4F4 322 aa12.48□□□□□ -0.41
HMGN3-201ENST00000275036 RNF148Q8N7C7 305 aa12.48□□□□□ -0.41
HMGN3-201ENST00000275036 FAM86B1Q8N7N1 296 aa12.48□□□□□ -0.41
HMGN3-201ENST00000275036 SYT14Q8NB59 555 aa12.48□□□□□ -0.41
HMGN3-201ENST00000275036 FAM156AQ8NDB6 213 aa12.48□□□□□ -0.41
HMGN3-201ENST00000275036 NOXO1Q8NFA2 376 aa12.48□□□□□ -0.41
HMGN3-201ENST00000275036 OR4F15Q8NGB8 312 aa12.48□□□□□ -0.41
HMGN3-201ENST00000275036 MCHR2Q969V1 340 aa12.48□□□□□ -0.41
HMGN3-201ENST00000275036 BPIFA2Q96DR5 249 aa12.48□□□□□ -0.41
HMGN3-201ENST00000275036 FNDC11Q9BVV2 318 aa12.48□□□□□ -0.41
HMGN3-201ENST00000275036 SPAG4Q9NPE6 437 aa12.48□□□□□ -0.41
HMGN3-201ENST00000275036 TMEM38BQ9NVV0 291 aa12.48□□□□□ -0.41
HMGN3-201ENST00000275036 HIF3AQ9Y2N7 669 aa12.48□□□□□ -0.41
HMGN3-201ENST00000275036 A0A087WUU8 490 aa12.47□□□□□ -0.41
HMGN3-201ENST00000275036 IGKV1D-43A0A0B4J1Z2 117 aa12.47□□□□□ -0.41
HMGN3-201ENST00000275036 A0A1W2PRG6 482 aa12.47□□□□□ -0.41
HMGN3-201ENST00000275036 MCIDASD6RGH6 385 aa12.47□□□□□ -0.41
HMGN3-201ENST00000275036 IGHG1P01857 330 aa12.47□□□□□ -0.41
HMGN3-201ENST00000275036 ZNF35P13682 527 aa12.47□□□□□ -0.41
HMGN3-201ENST00000275036 PTDSS1P48651 473 aaKnown RBP12.47□□□□□ -0.41
HMGN3-201ENST00000275036 CLRN1P58418 232 aa12.47□□□□□ -0.41
HMGN3-201ENST00000275036 RAB1AP62820 205 aa12.47□□□□□ -0.41
HMGN3-201ENST00000275036 PRKCDQ05655 676 aa12.47□□□□□ -0.41
HMGN3-201ENST00000275036 TRAM2Q15035 370 aa12.47□□□□□ -0.41
HMGN3-201ENST00000275036 MSMPQ1L6U9 139 aa12.47□□□□□ -0.41
HMGN3-201ENST00000275036 TBPL2Q6SJ96 375 aa12.47□□□□□ -0.41
HMGN3-201ENST00000275036 FKBP9P1Q75LS8 142 aa12.47□□□□□ -0.41
HMGN3-201ENST00000275036 ZNF584Q8IVC4 421 aa12.47□□□□□ -0.41
HMGN3-201ENST00000275036 C10orf105Q8TEF2 133 aa12.47□□□□□ -0.41
HMGN3-201ENST00000275036 HDAC2Q92769 488 aaKnown RBP12.47□□□□□ -0.41
HMGN3-201ENST00000275036 FAM162AQ96A26 154 aa12.47□□□□□ -0.41
HMGN3-201ENST00000275036 NMD3Q96D46 503 aaKnown RBP12.47□□□□□ -0.41
HMGN3-201ENST00000275036 SORCS2Q96PQ0 1159 aa12.47□□□□□ -0.41
HMGN3-201ENST00000275036 SH3GL3Q99963 347 aa12.47□□□□□ -0.41
HMGN3-201ENST00000275036 PLK3Q9H4B4 646 aa12.47□□□□□ -0.41
HMGN3-201ENST00000275036 ZNF442Q9H7R0 627 aa12.47□□□□□ -0.41
HMGN3-201ENST00000275036 ARL8BQ9NVJ2 186 aa12.47□□□□□ -0.41
HMGN3-201ENST00000275036 PMF1-BGLAPU3KQ54 211 aa12.47□□□□□ -0.41
HMGN3-201ENST00000275036 TRAV27A0A087WT01 109 aa12.46□□□□□ -0.41
HMGN3-201ENST00000275036 TMEM129A0AVI4 362 aa12.46□□□□□ -0.41
HMGN3-201ENST00000275036 B9A039 149 aa12.46□□□□□ -0.41
HMGN3-201ENST00000275036 NDUFAB1O14561 156 aa12.46□□□□□ -0.41
HMGN3-201ENST00000275036 CD5LO43866 347 aa12.46□□□□□ -0.41
HMGN3-201ENST00000275036 PDE5AO76074 875 aa12.46□□□□□ -0.41
HMGN3-201ENST00000275036 UBL3O95164 117 aa12.46□□□□□ -0.41
HMGN3-201ENST00000275036 SLC2A10O95528 541 aa12.46□□□□□ -0.41
HMGN3-201ENST00000275036 ACADSP16219 412 aa12.46□□□□□ -0.41
HMGN3-201ENST00000275036 DAP3P51398 398 aaKnown RBP12.46□□□□□ -0.41
HMGN3-201ENST00000275036 ZNF133P52736 654 aaPredicted RBP12.46□□□□□ -0.41
HMGN3-201ENST00000275036 EFNA4P52798 201 aa12.46□□□□□ -0.41
HMGN3-201ENST00000275036 PPP2R2BQ00005 443 aa12.46□□□□□ -0.41
HMGN3-201ENST00000275036 SNTB2Q13425 540 aaKnown RBP12.46□□□□□ -0.41
HMGN3-201ENST00000275036 RAB39AQ14964 217 aa12.46□□□□□ -0.41
HMGN3-201ENST00000275036 EFNB3Q15768 340 aa12.46□□□□□ -0.41
HMGN3-201ENST00000275036 ALG10Q5BKT4 473 aa12.46□□□□□ -0.41
HMGN3-201ENST00000275036 GLYATQ6IB77 296 aa12.46□□□□□ -0.41
HMGN3-201ENST00000275036 KRT80Q6KB66 452 aa12.46□□□□□ -0.41
HMGN3-201ENST00000275036 CLEC2AQ6UVW9 174 aa12.46□□□□□ -0.41
HMGN3-201ENST00000275036 IGFN1Q86VF2 1251 aa12.46□□□□□ -0.41
HMGN3-201ENST00000275036 ANKS4BQ8N8V4 417 aa12.46□□□□□ -0.41
HMGN3-201ENST00000275036 LRRC75AQ8NAA5 344 aa12.46□□□□□ -0.41
HMGN3-201ENST00000275036 ACOT11Q8WXI4 607 aaPredicted RBP12.46□□□□□ -0.41
HMGN3-201ENST00000275036 RHNO1Q9BSD3 238 aa12.46□□□□□ -0.41
HMGN3-201ENST00000275036 TXNIPQ9H3M7 391 aa12.46□□□□□ -0.41
HMGN3-201ENST00000275036 DCAF13Q9NV06 445 aaKnown RBP12.46□□□□□ -0.41
HMGN3-201ENST00000275036 ADA2Q9NZK5 511 aa12.46□□□□□ -0.41
HMGN3-201ENST00000275036 ENPP4Q9Y6X5 453 aa12.46□□□□□ -0.41
HMGN3-201ENST00000275036 NPIPB13A6NJU9 1138 aa12.45□□□□□ -0.42
HMGN3-201ENST00000275036 CENPBD1B2RD01 187 aa12.45□□□□□ -0.42
HMGN3-201ENST00000275036 NPIPB4C9JG80 1138 aa12.45□□□□□ -0.42
HMGN3-201ENST00000275036 CDC42EP2O14613 210 aa12.45□□□□□ -0.42
HMGN3-201ENST00000275036 CRLF1O75462 422 aa12.45□□□□□ -0.42
HMGN3-201ENST00000275036 RAB36O95755 333 aa12.45□□□□□ -0.42
HMGN3-201ENST00000275036 F12P00748 615 aaPredicted RBP12.45□□□□□ -0.42
HMGN3-201ENST00000275036 IGFBP1P08833 259 aaPredicted RBP12.45□□□□□ -0.42
HMGN3-201ENST00000275036 OR8G3PP0DMU2 310 aa12.45□□□□□ -0.42
HMGN3-201ENST00000275036 BMP4P12644 408 aa12.45□□□□□ -0.42
HMGN3-201ENST00000275036 ZNF26P17031 533 aaPredicted RBP12.45□□□□□ -0.42
HMGN3-201ENST00000275036 NR4A1P22736 598 aa12.45□□□□□ -0.42
HMGN3-201ENST00000275036 IFNA8P32881 189 aa12.45□□□□□ -0.42
HMGN3-201ENST00000275036 SNRPD2P62316 118 aaKnown RBP12.45□□□□□ -0.42
HMGN3-201ENST00000275036 FMODQ06828 376 aa12.45□□□□□ -0.42
HMGN3-201ENST00000275036 TOP3AQ13472 1001 aaPredicted RBP12.45□□□□□ -0.42
HMGN3-201ENST00000275036 DAG1Q14118 895 aa12.45□□□□□ -0.42
HMGN3-201ENST00000275036 FXNQ16595 210 aa12.45□□□□□ -0.42
HMGN3-201ENST00000275036 C10orf128Q5T292 105 aa12.45□□□□□ -0.42
HMGN3-201ENST00000275036 CLDN22Q8N7P3 220 aa12.45□□□□□ -0.42
HMGN3-201ENST00000275036 IL17RDQ8NFM7 739 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms