RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 H3F3CQ6NXT2 135 aa15.62■□□□□ 0.09
VRK1-201ENST00000216639 HDDC2Q7Z4H3 204 aa15.62■□□□□ 0.09
VRK1-201ENST00000216639 RAB43Q86YS6 212 aa15.62■□□□□ 0.09
VRK1-201ENST00000216639 UEVLDQ8IX04 471 aa15.62■□□□□ 0.09
VRK1-201ENST00000216639 SUMF1Q8NBK3 374 aa15.62■□□□□ 0.09
VRK1-201ENST00000216639 FAM83FQ8NEG4 500 aaPredicted RBP15.62■□□□□ 0.09
VRK1-201ENST00000216639 OR5M1Q8NGP8 315 aa15.62■□□□□ 0.09
VRK1-201ENST00000216639 RPS4Y2Q8TD47 263 aa15.62■□□□□ 0.09
VRK1-201ENST00000216639 KIAA1143Q96AT1 154 aaPredicted RBP15.62■□□□□ 0.09
VRK1-201ENST00000216639 TTYH2Q9BSA4 534 aa15.62■□□□□ 0.09
VRK1-201ENST00000216639 TMEM185BQ9H7F4 350 aa15.62■□□□□ 0.09
VRK1-201ENST00000216639 SLC19A2O60779 497 aa15.61■□□□□ 0.09
VRK1-201ENST00000216639 CBR3O75828 277 aa15.61■□□□□ 0.09
VRK1-201ENST00000216639 RPP14O95059 124 aaKnown RBP15.61■□□□□ 0.09
VRK1-201ENST00000216639 ADAM8P78325 824 aa15.61■□□□□ 0.09
VRK1-201ENST00000216639 SLC35A1P78382 337 aa15.61■□□□□ 0.09
VRK1-201ENST00000216639 IDNKQ5T6J7 187 aa15.61■□□□□ 0.09
VRK1-201ENST00000216639 TIGD3Q6B0B8 471 aa15.61■□□□□ 0.09
VRK1-201ENST00000216639 XKRXQ6PP77 449 aa15.61■□□□□ 0.09
VRK1-201ENST00000216639 SLC22A16Q86VW1 577 aa15.61■□□□□ 0.09
VRK1-201ENST00000216639 OR8H2Q8N162 312 aa15.61■□□□□ 0.09
VRK1-201ENST00000216639 ZNF454Q8N9F8 522 aa15.61■□□□□ 0.09
VRK1-201ENST00000216639 POC5Q8NA72 575 aa15.61■□□□□ 0.09
VRK1-201ENST00000216639 NTNG2Q96CW9 530 aa15.61■□□□□ 0.09
VRK1-201ENST00000216639 JSRP1Q96MG2 331 aaPredicted RBP15.61■□□□□ 0.09
VRK1-201ENST00000216639 PDCD1LG2Q9BQ51 273 aa15.61■□□□□ 0.09
VRK1-201ENST00000216639 TSPAN10Q9H1Z9 355 aaPredicted RBP15.61■□□□□ 0.09
VRK1-201ENST00000216639 PPIL3Q9H2H8 161 aaKnown RBP15.61■□□□□ 0.09
VRK1-201ENST00000216639 CCDC86Q9H6F5 360 aaKnown RBP15.61■□□□□ 0.09
VRK1-201ENST00000216639 SP140LQ9H930 580 aa15.61■□□□□ 0.09
VRK1-201ENST00000216639 PRR32B1ATL7 298 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 UPK3AO75631 287 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 GPANK1O95872 356 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 SPARCP09486 303 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 UCHL1P09936 223 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 RAB3BP20337 219 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 Q0VFX4 171 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 ALKBH1Q13686 389 aaKnown RBP15.6■□□□□ 0.09
VRK1-201ENST00000216639 TRIP6Q15654 476 aaKnown RBP15.6■□□□□ 0.09
VRK1-201ENST00000216639 CSRP2Q16527 193 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 TMEM176BQ3YBM2 270 aaPredicted RBP15.6■□□□□ 0.09
VRK1-201ENST00000216639 FAM27D1Q5T7N8 215 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 KCTD18Q6PI47 426 aaPredicted RBP15.6■□□□□ 0.09
VRK1-201ENST00000216639 METAP1DQ6UB28 335 aaPredicted RBP15.6■□□□□ 0.09
VRK1-201ENST00000216639 OR13C5Q8NGS8 318 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 NSMAFQ92636 917 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 KCNK17Q96T54 332 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 KCNG2Q9UJ96 466 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 A0A1W2PNU3 283 aaPredicted RBP15.6■□□□□ 0.09
VRK1-201ENST00000216639 MASP2O00187 686 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 SULT2B1O00204 365 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 KHDRBS3O75525 346 aaKnown RBP15.6■□□□□ 0.09
VRK1-201ENST00000216639 ABHD16AO95870 558 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 PTTG1O95997 202 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 ZNF823P16415 610 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 ZNF17P17021 662 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 SFTPDP35247 375 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 BIDP55957 195 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 RPS11P62280 158 aaKnown RBP eCLIP15.6■□□□□ 0.09
VRK1-201ENST00000216639 HSD17B12Q53GQ0 312 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 ACER2Q5QJU3 275 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 RAET1LQ5VY80 246 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 TMEM225Q6GV28 225 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 ZNF544Q6NX49 715 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 SFXN4Q6P4A7 337 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 GDPD1Q8N9F7 314 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 OR5AK2Q8NH90 309 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 PPP1R14BQ96C90 147 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 GNRHR2Q96P88 292 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 RBP7Q96R05 134 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 OR14A2Q96R54 314 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 SDHCQ99643 169 aaPredicted RBP15.6■□□□□ 0.09
VRK1-201ENST00000216639 MFRPQ9BY79 579 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 SRRQ9GZT4 340 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 PROK2Q9HC23 129 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 MED29Q9NX70 200 aa15.6■□□□□ 0.09
VRK1-201ENST00000216639 COA3Q9Y2R0 106 aaPredicted RBP15.6■□□□□ 0.09
VRK1-201ENST00000216639 A0A1W2PNR3 127 aa15.59■□□□□ 0.09
VRK1-201ENST00000216639 HPGDSO60760 199 aa15.59■□□□□ 0.09
VRK1-201ENST00000216639 TMCC2O75069 709 aa15.59■□□□□ 0.09
VRK1-201ENST00000216639 ZNF432O94892 652 aa15.59■□□□□ 0.09
VRK1-201ENST00000216639 ZFPL1O95159 310 aa15.59■□□□□ 0.09
VRK1-201ENST00000216639 PTBP1P26599 531 aaKnown RBP eCLIP15.59■□□□□ 0.093e-15■■■□□ 14.7
VRK1-201ENST00000216639 MAPK3P27361 379 aaPredicted RBP15.59■□□□□ 0.09
VRK1-201ENST00000216639 NANOS3P60323 173 aaKnown RBP15.59■□□□□ 0.09
VRK1-201ENST00000216639 RASGEF1BQ0VAM2 473 aa15.59■□□□□ 0.09
VRK1-201ENST00000216639 ZNF239Q16600 458 aaKnown RBP15.59■□□□□ 0.09
VRK1-201ENST00000216639 C11orf91Q3C1V1 193 aa15.59■□□□□ 0.09
VRK1-201ENST00000216639 JMJD6Q6NYC1 403 aaPredicted RBP15.59■□□□□ 0.09
VRK1-201ENST00000216639 UNQ9370/PRO34162Q6UXP9 181 aa15.59■□□□□ 0.09
VRK1-201ENST00000216639 MIB2Q96AX9 1013 aa15.59■□□□□ 0.09
VRK1-201ENST00000216639 OXGR1Q96P68 337 aa15.59■□□□□ 0.09
VRK1-201ENST00000216639 OR8B4Q96RC9 309 aa15.59■□□□□ 0.09
VRK1-201ENST00000216639 B3GNT4Q9C0J1 378 aa15.59■□□□□ 0.09
VRK1-201ENST00000216639 COMMD4Q9H0A8 199 aa15.59■□□□□ 0.09
VRK1-201ENST00000216639 MRPL22Q9NWU5 206 aaKnown RBP15.59■□□□□ 0.09
VRK1-201ENST00000216639 SPEGQ15772 3267 aa15.58■□□□□ 0.09
VRK1-201ENST00000216639 PDCD5O14737 125 aa15.58■□□□□ 0.08
VRK1-201ENST00000216639 RAD1O60671 282 aa15.58■□□□□ 0.08
VRK1-201ENST00000216639 TNFSF15O95150 251 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 181.4 ms