RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Ankle1A8VU90 534 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Mybpc1D3YU50 1127 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Mab21l1O70299 359 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 H2-EaP01904 255 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 P04224 255 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 LhcgrP30730 700 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Pcbd1P61458 104 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Rps25P62852 125 aaKnown RBP10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Gm525Q3V3I5 90 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 MybphlQ5FW53 355 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 E2f1Q61501 430 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Zfp933Q6PEE4 468 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 RbksQ8R1Q9 323 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Dnajb11Q99KV1 358 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Klhdc8bQ9D2D9 354 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Nupr1Q9WTK0 80 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Spo11Q9WTK8 396 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ppp1r3dA2AJW4 279 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 P01665 111 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 P01666 111 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Mup3P04939 184 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Cdh3P10287 822 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ppp1caP62137 330 aaKnown RBP10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Pgap2Q3TQR0 254 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Slc16a11Q5NC32 447 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 SynprQ8BGN8 265 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ip6k3Q8BWD2 396 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Gm9938Q8C3P5 112 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Mmgt2Q8R3L0 123 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Tspan10Q8VCF5 331 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ogfrl1Q8VE52 464 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr836Q8VFJ3 317 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Dnaja3Q99M87 480 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Slco1a4Q9EP96 670 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Thsd1Q9JM61 851 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Fam90a1aA2A4E2 429 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Vmn2r66K7N6R9 851 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Vmn2r124K7N789 855 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Dll3O88516 592 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ly6fP35460 134 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Phf12Q5SPL2 1003 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Aimp2Q8R010 320 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Itfg2Q91WI7 443 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Uckl1Q91YL3 548 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 CsprsQ99388 208 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ier5lQ99J55 406 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Cmtm3Q99LJ5 184 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Nox4Q9JHI8 578 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Dcaf4A0A1Y7VNZ0 532 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Hpse2B2RY83 592 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Gm20403G3UYB0 123 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Il7rP16872 459 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Cst3P21460 140 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 HgfQ08048 728 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ablim2Q8BL65 612 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 MepeQ8K4L6 441 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Tmem5Q8VDX6 444 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Lactb2Q99KR3 288 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Elovl7Q9D2Y9 281 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Defb5Q9EPV9 64 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ca14Q9WVT6 337 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Oc90Q9Z0L3 485 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Gm34653A0A1L1SR01 368 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Cldn34aG3UW52 211 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Tead1P30051 426 aaKnown RBP10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Rln1P47932 185 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 CtseP70269 397 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ube2zQ3UE37 356 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Tmub2Q3V209 319 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Plekhm1Q7TSI1 1074 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Sdhaf4Q8BTE0 104 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Fam221aQ8C790 301 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Lrrc20Q8CI70 184 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr658Q8VGV5 323 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Gal3st1Q9JHE4 423 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Zdbf2Q5SS00 2493 aaKnown RBP10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 A26c2A0A140LHE4 291 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Slc25a43A2A3V2 341 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Maml2F6U238 1170 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 H2-M1F7CXU4 344 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 PdgfbP31240 241 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 B3gnt4Q1RLK6 350 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 ArhgdigQ62160 225 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Tmem108Q8BHE4 574 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Tmprss11gQ8BZ10 417 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 LaynQ8C351 381 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr116Q923Q6 321 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Vstm5Q9D806 199 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 DptQ9QZZ6 201 aa10.91□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Exosc3Q7TQK4 274 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Rab39aQ8BHD0 217 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Smim37Q8BT35 56 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 PigzQ8BTP0 560 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Tgm4Q8BZH1 670 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ssuh2Q8C3L1 340 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Crtac1Q8R555 646 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr1054Q8VGS7 312 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Upk1aQ9D132 257 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ptges3lQ9D9A7 131 aa10.9□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Mbd3l1Q9D9H3 186 aa10.9□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms