RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 SF3B5Q9BWJ5 86 aaKnown RBP8.25□□□□□ -1.09
BRCA1-226ENST00000591534 C1QTNF6Q9BXI9 259 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 A4GALTQ9NPC4 353 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 SLC17A5Q9NRA2 495 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 KCNE5Q9UJ90 142 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 A0A096LNT2 108 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 TMED7-TICAM2A0A0A6YYA0 188 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 A0A0G2JPF8 293 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 A0A1W2PR80 420 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 HNRNPCL2B2RXH8 293 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 HNRNPCL3B7ZW38 293 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 NME4O00746 187 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 BCAS1O75363 584 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-226ENST00000591534 VAMP5O95183 116 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 CRYAAP02489 173 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 ITGA5P08648 1049 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 HNRNPCL4P0DMR1 293 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 IGHV4-31P0DP07 118 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 APEHP13798 732 aaKnown RBP8.24□□□□□ -1.09
BRCA1-226ENST00000591534 CCNA2P20248 432 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 CXCR1P25024 350 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 EDNRAP25101 427 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 CDKN2CP42773 168 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 SLC1A3P43003 542 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 NR4A2P43354 598 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 SMIM11AP58511 58 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 UBE2NP61088 152 aaKnown RBP8.24□□□□□ -1.09
BRCA1-226ENST00000591534 COPZ1P61923 177 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 SUMO1P63165 101 aaKnown RBP8.24□□□□□ -1.09
BRCA1-226ENST00000591534 H3F3AP84243 136 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 SPOCK1Q08629 439 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 FUT5Q11128 374 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 GGTLC2Q14390 218 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 TYW3Q6IPR3 259 aaKnown RBP8.24□□□□□ -1.09
BRCA1-226ENST00000591534 PAQR6Q6TCH4 344 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 AAED1Q7RTV5 226 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 SLC46A3Q7Z3Q1 461 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 TSPYL5Q86VY4 417 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-226ENST00000591534 ADGRG3Q86Y34 549 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 CCDC103Q8IW40 242 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 BBS10Q8TAM1 723 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 RAB8BQ92930 207 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 TMEM45BQ96B21 275 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 FBXO17Q96EF6 278 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 C1orf159Q96HA4 380 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 ARL5BQ96KC2 179 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 TRNT1Q96Q11 434 aaKnown RBP8.24□□□□□ -1.09
BRCA1-226ENST00000591534 TAPBPLQ9BX59 468 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 RAB1BQ9H0U4 201 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 MTHFD2LQ9H903 347 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-226ENST00000591534 SLC6A13Q9NSD5 602 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 STX18Q9P2W9 335 aaKnown RBP8.24□□□□□ -1.09
BRCA1-226ENST00000591534 TMEFF2Q9UIK5 374 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-226ENST00000591534 IFT52Q9Y366 437 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 TMED7Q9Y3B3 224 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 FLVCR1Q9Y5Y0 555 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 ABCA1O95477 2261 aa8.24□□□□□ -1.09
BRCA1-226ENST00000591534 DHRS12A0PJE2 317 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 B9A039 149 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 ZNF587BE7ETH6 402 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 PDLIM1O00151 329 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 FAAHO00519 579 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 CXCR6O00574 342 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 PDE5AO76074 875 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 RAP2AP10114 183 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 NR2F1P10589 423 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 IL7RP16871 459 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 PCMT1P22061 227 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 SERPINF1P36955 418 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 MTPNP58546 118 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 CDK6Q00534 326 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 CEACAM7Q14002 265 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 SLC17A1Q14916 467 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 LARS2Q15031 903 aaKnown RBP8.23□□□□□ -1.09
BRCA1-226ENST00000591534 MAPK14Q16539 360 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 CARTPTQ16568 116 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 FAM120AOSQ5T036 256 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 OTUD3Q5T2D3 398 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-226ENST00000591534 C9orf135Q5VTT2 229 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 TMEM225Q6GV28 225 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 TNFAIP8L2Q6P589 184 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-226ENST00000591534 B3GLCTQ6Y288 498 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 CCDC80Q76M96 950 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 CYP4Z1Q86W10 505 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 CALHM3Q86XJ0 350 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 PEX5LQ8IYB4 626 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 WDR31Q8NA23 367 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 HTRA1Q92743 480 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 SLC35B4Q969S0 331 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 BOD1Q96IK1 185 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 ZNF583Q96ND8 569 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 ZNF347Q96SE7 839 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 VRK1Q99986 396 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-226ENST00000591534 KATNB1Q9BVA0 655 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 OR11A1Q9GZK7 315 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 DENND2DQ9H6A0 471 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-226ENST00000591534 CHODLQ9H9P2 273 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 RNPEPL1Q9HAU8 725 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 BCL2L10Q9HD36 194 aa8.23□□□□□ -1.09
BRCA1-226ENST00000591534 SLC7A10Q9NS82 523 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms