RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 MAGED1Q9Y5V3 778 aaPredicted RBP3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 SPIN1Q9Y657 262 aaPredicted RBP3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 AKAP6Q13023 2319 aa3.34□□□□□ -1.87
SMARCE1-215ENST00000578995 POLQO75417 2590 aa3.34□□□□□ -1.88
SMARCE1-215ENST00000578995 PRRC2AP48634 2157 aaKnown RBP3.34□□□□□ -1.88
SMARCE1-215ENST00000578995 ABCA2Q9BZC7 2435 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 CR1P17927 2039 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 TRAV27A0A087WT01 109 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 IGKV1D-43A0A0B4J1Z2 117 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 FAM221AA4D161 298 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 HTR3EA5X5Y0 456 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 NKX2-6A6NCS4 301 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 EIF4E1BA6NMX2 242 aaKnown RBP3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 HSPB2A8KAH6 182 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 MCIDASD6RGH6 385 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 KPNA4O00629 521 aaPredicted RBP3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 DLGAP1O14490 977 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 BHLHE40O14503 412 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 IMPA2O14732 288 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 OR2T1O43869 369 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 EIF1BO60739 113 aaKnown RBP3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 ENTPD5O75356 428 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 TIPRLO75663 272 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 GADD45GO95257 159 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 CLDN14O95500 239 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 TXNDC12O95881 172 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 CH25HO95992 272 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 THBDP07204 575 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 YES1P07947 543 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 ITGA5P08648 1049 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 IGFBP1P08833 259 aaPredicted RBP3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 PGA4P0DJD7 388 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 PGA3P0DJD8 388 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 TFPIP10646 304 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 FCGR2AP12318 317 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 IFI30P13284 250 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 FPR3P25089 353 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 GSTT1P30711 240 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 AQP2P41181 271 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 GPR4P46093 362 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 OR2B6P58173 313 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 KRTAP10-11P60412 298 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 RPS3AP61247 264 aaKnown RBP3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 CSNK2A1P68400 391 aaPredicted RBP3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 PPP2R2BQ00005 443 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 SPIBQ01892 262 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 CHRNB3Q05901 458 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 RUNX1T1Q06455 604 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 PUDPQ08623 228 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 RASGEF1BQ0VAM2 473 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 DBPQ10586 325 aaPredicted RBP3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 RNPS1Q15287 305 aaKnown RBP3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 ATP6AP1Q15904 470 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 HSPB2Q16082 182 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 MICAQ29983 383 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 FAM98BQ52LJ0 330 aaKnown RBP3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 MESTQ5EB52 335 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 TSPO2Q5TGU0 170 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 C1orf146Q5VVC0 180 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 TMEM211Q6ICI0 200 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 OR2A2Q6IF42 318 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 TTC33Q6PID6 262 aaPredicted RBP3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 CD300LDQ6UXZ3 194 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 STAC2Q6ZMT1 411 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 ZNF620Q6ZNG0 422 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 FOXL2NBQ6ZUU3 175 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 FKBP9P1Q75LS8 142 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 H1FNTQ75WM6 255 aaPredicted RBP3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 ZNF627Q7L945 461 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 PXKQ7Z7A4 578 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 MRGPRGQ86SM5 289 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 CYP4Z1Q86W10 505 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 SPATA24Q86W54 205 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 SLC43A2Q8N370 569 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 KDM8Q8N371 416 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 CLDN22Q8N7P3 220 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 ZNF610Q8N9Z0 462 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 OR4Q3Q8NH05 313 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 OR5J2Q8NH18 312 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 PIGXQ8TBF5 258 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 SSC4DQ8WTU2 575 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 ASB10Q8WXI3 467 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 RND1Q92730 232 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 POP5Q969H6 163 aaKnown RBP3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 TMEM54Q969K7 222 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 MCUR1Q96AQ8 359 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 SDCCAG3Q96C92 435 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 INTS12Q96CB8 462 aaKnown RBP3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 SGTBQ96EQ0 304 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 TXNDC15Q96J42 360 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 HS6ST2Q96MM7 605 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 ZNF75AQ96N20 296 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 OXGR1Q96P68 337 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 TSPAN32Q96QS1 320 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 OR2M2Q96R28 347 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 ZNF347Q96SE7 839 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 PKP2Q99959 881 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 NIPSNAP1Q9BPW8 284 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 FNDC11Q9BVV2 318 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 DGCR6LQ9BY27 220 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms