RNA–Protein interactions for RNA: ENST00000569095.1

CDH11-215, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 436 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-215ENST00000569095 RIMS3Q9UJD0 308 aa2.34□□□□□ -2.03
CDH11-215ENST00000569095 CDH9Q9ULB4 789 aa2.34□□□□□ -2.03
CDH11-215ENST00000569095 UBQLN1Q9UMX0 589 aaKnown RBP2.34□□□□□ -2.03
CDH11-215ENST00000569095 ALG6Q9Y672 507 aa2.34□□□□□ -2.03
CDH11-215ENST00000569095 ATRXP46100 2492 aa2.34□□□□□ -2.04
CDH11-215ENST00000569095 VWA8A3KMH1 1905 aa2.34□□□□□ -2.04
CDH11-215ENST00000569095 USP24Q9UPU5 2620 aa2.34□□□□□ -2.04
CDH11-215ENST00000569095 PKD1L2Q7Z442 2459 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 OBSL1O75147 1896 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 HELZP42694 1942 aaKnown RBP2.33□□□□□ -2.04
CDH11-215ENST00000569095 TUBAL3A6NHL2 446 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 C5orf67F2Z3F1 127 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 H0Y9J4 135 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 K7ENP7 123 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 KIF2AO00139 706 aaPredicted RBP2.33□□□□□ -2.04
CDH11-215ENST00000569095 SULT2B1O00204 365 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 EFNA2O43921 213 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 UGT2B17O75795 530 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 F10P00742 488 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 SEMG1P04279 462 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 DUX4L4P0CJ87 422 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 SLC2A3P11169 496 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 PGCP20142 388 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 NBL1P41271 181 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 KIR2DS2P43631 304 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 SNAP25P60880 206 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 LAGE3Q14657 143 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 SSX2Q16385 188 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 LCE3AQ5TA76 89 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 FAM71F2Q6NXP2 309 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 SCARA5Q6ZMJ2 495 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 CCDC73Q6ZRK6 1079 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 RUFY3Q7L099 469 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 ASCL5Q7RTU5 278 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 FAM228AQ86W67 206 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 PPP1R27Q86WC6 154 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 ERI1Q8IV48 349 aaKnown RBP2.33□□□□□ -2.04
CDH11-215ENST00000569095 LINC01561Q8N1V8 128 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 UBE2J2Q8N2K1 259 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 ALLCQ8N6M5 410 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 C15orf54Q8N8G6 183 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 BBS1Q8NFJ9 593 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 STXBP6Q8NFX7 210 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 OR9A1PQ8NGU1 263 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 PPTC7Q8NI37 304 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 SETD7Q8WTS6 366 aaKnown RBP2.33□□□□□ -2.04
CDH11-215ENST00000569095 TOP1MTQ969P6 601 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 NUS1Q96E22 293 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 SH3YL1Q96HL8 342 aaPredicted RBP2.33□□□□□ -2.04
CDH11-215ENST00000569095 AMDHD1Q96NU7 426 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 CHIAQ9BZP6 476 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 NXF5Q9H1B4 397 aaKnown RBP2.33□□□□□ -2.04
CDH11-215ENST00000569095 BOLA2Q9H3K6 86 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 CHMP4BQ9H444 224 aaKnown RBP2.33□□□□□ -2.04
CDH11-215ENST00000569095 RAB18Q9NP72 206 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 ABCB10Q9NRK6 738 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 ETNK2Q9NVF9 386 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 CD274Q9NZQ7 290 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 ONECUT1Q9UBC0 465 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 PCSK1NQ9UHG2 260 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 CFAP47Q6ZTR5 3102 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 ABCB11O95342 1321 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 WDR19Q8NEZ3 1342 aa2.33□□□□□ -2.04
CDH11-215ENST00000569095 FASNP49327 2511 aaKnown RBP2.33□□□□□ -2.04
CDH11-215ENST00000569095 PRRC2AP48634 2157 aaKnown RBP2.33□□□□□ -2.04
CDH11-215ENST00000569095 TDRD6O60522 2096 aaKnown RBP2.32□□□□□ -2.04
CDH11-215ENST00000569095 MYO18AQ92614 2054 aaKnown RBP2.32□□□□□ -2.04
CDH11-215ENST00000569095 F5P12259 2224 aa2.32□□□□□ -2.04
CDH11-215ENST00000569095 CHD6Q8TD26 2715 aa2.32□□□□□ -2.04
CDH11-215ENST00000569095 IGHV7-81A0A0B4J1V7 117 aa2.32□□□□□ -2.04
CDH11-215ENST00000569095 LOC100131303A0A0U1RQF7 123 aa2.32□□□□□ -2.04
CDH11-215ENST00000569095 A0A1W2PNU3 283 aaPredicted RBP2.32□□□□□ -2.04
CDH11-215ENST00000569095 ARHGEF35A5YM69 484 aa2.32□□□□□ -2.04
CDH11-215ENST00000569095 SNTNA6NMZ2 147 aa2.32□□□□□ -2.04
CDH11-215ENST00000569095 LOC730098B7Z3J9 87 aa2.32□□□□□ -2.04
CDH11-215ENST00000569095 E7ESA3 106 aa2.32□□□□□ -2.04
CDH11-215ENST00000569095 NPIPA7E9PJI5 369 aa2.32□□□□□ -2.04
CDH11-215ENST00000569095 CASQ2O14958 399 aaPredicted RBP2.32□□□□□ -2.04
CDH11-215ENST00000569095 EMC8O43402 210 aa2.32□□□□□ -2.04
CDH11-215ENST00000569095 LRATO95237 230 aa2.32□□□□□ -2.04
CDH11-215ENST00000569095 H2BFMP0C1H6 154 aa2.32□□□□□ -2.04
CDH11-215ENST00000569095 NPIPA8P0DM63 369 aa2.32□□□□□ -2.04
CDH11-215ENST00000569095 SMIM10L2AP0DMW4 78 aa2.32□□□□□ -2.04
CDH11-215ENST00000569095 SMIM10L2BP0DMW5 78 aa2.32□□□□□ -2.04
CDH11-215ENST00000569095 IGLL1P15814 213 aa2.32□□□□□ -2.04
CDH11-215ENST00000569095 GCFC2P16383 781 aaKnown RBP2.32□□□□□ -2.04
CDH11-215ENST00000569095 HOXB8P17481 243 aaPredicted RBP2.32□□□□□ -2.04
CDH11-215ENST00000569095 MX1P20591 662 aa2.32□□□□□ -2.04
CDH11-215ENST00000569095 PCMT1P22061 227 aa2.32□□□□□ -2.04
CDH11-215ENST00000569095 GALP22466 123 aa2.32□□□□□ -2.04
CDH11-215ENST00000569095 ANXA13P27216 316 aa2.32□□□□□ -2.04
CDH11-215ENST00000569095 CCR1P32246 355 aa2.32□□□□□ -2.04
CDH11-215ENST00000569095 RBMXP38159 391 aaKnown RBP2.32□□□□□ -2.04
CDH11-215ENST00000569095 CCT3P49368 545 aaKnown RBP2.32□□□□□ -2.04
CDH11-215ENST00000569095 CASP4P49662 377 aa2.32□□□□□ -2.04
CDH11-215ENST00000569095 AP3M2P53677 418 aa2.32□□□□□ -2.04
CDH11-215ENST00000569095 PRRX1P54821 245 aa2.32□□□□□ -2.04
CDH11-215ENST00000569095 CDH4P55283 916 aa2.32□□□□□ -2.04
CDH11-215ENST00000569095 EWSR1Q01844 656 aaKnown RBP eCLIP2.32□□□□□ -2.04
CDH11-215ENST00000569095 CUL1Q13616 776 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms