RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 SYT4Q9H2B2 425 aa8.53□□□□□ -1.04
CDH13-205ENST00000562307 TMEM185BQ9H7F4 350 aa8.53□□□□□ -1.04
CDH13-205ENST00000562307 TRIM36Q9NQ86 728 aa8.53□□□□□ -1.04
CDH13-205ENST00000562307 NPIPA1Q9UND3 350 aa8.53□□□□□ -1.04
CDH13-205ENST00000562307 SSR3Q9UNL2 185 aa8.53□□□□□ -1.04
CDH13-205ENST00000562307 RASD1Q9Y272 281 aa8.53□□□□□ -1.04
CDH13-205ENST00000562307 PTPRBP23467 1997 aa8.53□□□□□ -1.04
CDH13-205ENST00000562307 MUC6Q6W4X9 2439 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 A0A0J9YW62 118 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 LOC100506127A0A0U1RQW1 187 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 OR5H15A6NDH6 313 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 ARGFXA6NJG6 315 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 VGLL3A8MV65 326 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 FAM171A2A8MVW0 826 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 ZNF814B7Z6K7 855 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 ZNF670-ZNF695F2Z2N8 137 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 J3QLW9 94 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 NKX2-8O15522 239 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 PLPP2O43688 288 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 TRAF3IP2O43734 574 aaPredicted RBP8.52□□□□□ -1.05
CDH13-205ENST00000562307 SELENOFO60613 162 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 SERPINI2O75830 405 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 VAMP5O95183 116 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 OPN1LWP04000 364 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 HPNP05981 417 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 SP1P08047 785 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 INHBBP09529 407 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 ZNF19P17023 458 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 WT1P19544 449 aaPredicted RBP8.52□□□□□ -1.05
CDH13-205ENST00000562307 CELP19835 753 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 TCEA1P23193 301 aaKnown RBP8.52□□□□□ -1.05
CDH13-205ENST00000562307 SFTPDP35247 375 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 TGFBR1P36897 503 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 NAA10P41227 235 aaPredicted RBP8.52□□□□□ -1.05
CDH13-205ENST00000562307 GFRA1P56159 465 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 OR12D2P58182 307 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 RPS3AP61247 264 aaKnown RBP8.52□□□□□ -1.05
CDH13-205ENST00000562307 RPS25P62851 125 aaKnown RBP8.52□□□□□ -1.05
CDH13-205ENST00000562307 CSNK2A1P68400 391 aaPredicted RBP8.52□□□□□ -1.05
CDH13-205ENST00000562307 ROR2Q01974 943 aaKnown RBP8.52□□□□□ -1.05
CDH13-205ENST00000562307 POU3F1Q03052 451 aaPredicted RBP8.52□□□□□ -1.05
CDH13-205ENST00000562307 MELKQ14680 651 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 POU4F3Q15319 338 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 TRAM1Q15629 374 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 MOGQ16653 247 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 HYAL4Q2M3T9 481 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 CCDC58Q4VC31 144 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 ATP1A1-AS1Q5TC04 95 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 AGAP7PQ5VUJ5 663 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 DMKNQ6E0U4 476 aaPredicted RBP8.52□□□□□ -1.05
CDH13-205ENST00000562307 SLC25A25Q6KCM7 469 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 LINC00696Q6ZRV3 163 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 KCTD20Q7Z5Y7 419 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 VASH2Q86V25 355 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 WDFY1Q8IWB7 410 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 UEVLDQ8IX04 471 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 FAM83FQ8NEG4 500 aaPredicted RBP8.52□□□□□ -1.05
CDH13-205ENST00000562307 OR6X1Q8NH79 312 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 SMAP2Q8WU79 429 aaPredicted RBP8.52□□□□□ -1.05
CDH13-205ENST00000562307 TRMT61AQ96FX7 289 aaKnown RBP8.52□□□□□ -1.05
CDH13-205ENST00000562307 ADGRG7Q96K78 797 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 C4orf36Q96KX1 117 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 KLHL15Q96M94 604 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 AGAP4Q96P64 663 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 NAA11Q9BSU3 229 aaPredicted RBP8.52□□□□□ -1.05
CDH13-205ENST00000562307 MED18Q9BUE0 208 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 RNF167Q9H6Y7 350 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 TXNL4BQ9NX01 149 aaKnown RBP8.52□□□□□ -1.05
CDH13-205ENST00000562307 CCDC59Q9P031 241 aaKnown RBP8.52□□□□□ -1.05
CDH13-205ENST00000562307 COPS3Q9UNS2 423 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 SIRT4Q9Y6E7 314 aaPredicted RBP8.52□□□□□ -1.05
CDH13-205ENST00000562307 PMF1-BGLAPU3KQ54 211 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 MPDZO75970 2070 aa8.52□□□□□ -1.05
CDH13-205ENST00000562307 DMXL1Q9Y485 3027 aa8.51□□□□□ -1.05
CDH13-205ENST00000562307 AHCTF1Q8WYP5 2266 aa8.51□□□□□ -1.05
CDH13-205ENST00000562307 E9PI62 339 aa8.51□□□□□ -1.05
CDH13-205ENST00000562307 PHYHO14832 338 aa8.51□□□□□ -1.05
CDH13-205ENST00000562307 NME2P1O60361 137 aa8.51□□□□□ -1.05
CDH13-205ENST00000562307 SLC16A7O60669 478 aa8.51□□□□□ -1.05
CDH13-205ENST00000562307 SULT1C4O75897 302 aa8.51□□□□□ -1.05
CDH13-205ENST00000562307 GLSO94925 669 aaPredicted RBP8.51□□□□□ -1.05
CDH13-205ENST00000562307 HLA-DPB1P04440 258 aa8.51□□□□□ -1.05
CDH13-205ENST00000562307 CTLA4P16410 223 aa8.51□□□□□ -1.05
CDH13-205ENST00000562307 ALOX5APP20292 161 aa8.51□□□□□ -1.05
CDH13-205ENST00000562307 NME2P22392 152 aa8.51□□□□□ -1.05
CDH13-205ENST00000562307 PEX19P40855 299 aa8.51□□□□□ -1.05
CDH13-205ENST00000562307 SERPINB10P48595 397 aa8.51□□□□□ -1.05
CDH13-205ENST00000562307 GBX2P52951 348 aaPredicted RBP8.51□□□□□ -1.05
CDH13-205ENST00000562307 BIDP55957 195 aa8.51□□□□□ -1.05
CDH13-205ENST00000562307 RAC3P60763 192 aa8.51□□□□□ -1.05
CDH13-205ENST00000562307 GPR85P60893 370 aa8.51□□□□□ -1.05
CDH13-205ENST00000562307 FABP5Q01469 135 aa8.51□□□□□ -1.05
CDH13-205ENST00000562307 NHLH1Q02575 133 aa8.51□□□□□ -1.05
CDH13-205ENST00000562307 MRPL28Q13084 256 aaKnown RBP8.51□□□□□ -1.05
CDH13-205ENST00000562307 SRSF6Q13247 344 aaKnown RBP8.51□□□□□ -1.05
CDH13-205ENST00000562307 CLN3Q13286 438 aa8.51□□□□□ -1.05
CDH13-205ENST00000562307 HIST3H3Q16695 136 aa8.51□□□□□ -1.05
CDH13-205ENST00000562307 PCK2Q16822 640 aa8.51□□□□□ -1.05
CDH13-205ENST00000562307 TBC1D25Q3MII6 688 aa8.51□□□□□ -1.05
CDH13-205ENST00000562307 TEX30Q5JUR7 227 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms