RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 ACOT11Q8WXI4 607 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-211ENST00000559850 ZNF566Q969W8 418 aa12.92□□□□□ -0.34
RABGGTA-211ENST00000559850 SLC25A44Q96H78 314 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-211ENST00000559850 C7orf34Q96L11 122 aa12.92□□□□□ -0.34
RABGGTA-211ENST00000559850 LRR1Q96L50 414 aa12.92□□□□□ -0.34
RABGGTA-211ENST00000559850 ADAD1Q96M93 576 aaKnown RBP12.92□□□□□ -0.34
RABGGTA-211ENST00000559850 Q96MF0 132 aa12.92□□□□□ -0.34
RABGGTA-211ENST00000559850 ZNF347Q96SE7 839 aa12.92□□□□□ -0.34
RABGGTA-211ENST00000559850 TRAF4Q9BUZ4 470 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-211ENST00000559850 CXorf56Q9H5V9 222 aa12.92□□□□□ -0.34
RABGGTA-211ENST00000559850 NMNAT1Q9HAN9 279 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-211ENST00000559850 OBP2BQ9NPH6 170 aa12.92□□□□□ -0.34
RABGGTA-211ENST00000559850 GLTPQ9NZD2 209 aa12.92□□□□□ -0.34
RABGGTA-211ENST00000559850 NDUFAF4Q9P032 175 aa12.92□□□□□ -0.34
RABGGTA-211ENST00000559850 ADAM21Q9UKJ8 722 aa12.92□□□□□ -0.34
RABGGTA-211ENST00000559850 SAMD4AQ9UPU9 718 aaKnown RBP12.92□□□□□ -0.34
RABGGTA-211ENST00000559850 USF3Q68DE3 2245 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 A0A1W2PRG6 482 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 EFCAB9A8MZ26 197 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 MCIDASD6RGH6 385 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 CDC42EP2O14613 210 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 TRMUO75648 421 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 IGF2P01344 180 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 H1F0P07305 194 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 QDPRP09417 244 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 TSPAN19P0C672 248 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 T-ENOLP0DO92 83 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 CD79AP11912 226 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 CALCRP30988 508 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 FABP6P51161 128 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 ATP5J2P56134 94 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 CLRN1P58418 232 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 FXNQ16595 210 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 ALG10Q5BKT4 473 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 FGD3Q5JSP0 725 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 CYP2R1Q6VVX0 501 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 MBOAT2Q6ZWT7 520 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 DEPDC4Q8N2C3 294 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 OR52J3Q8NH60 311 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 FGFBP3Q8TAT2 258 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 LIPHQ8WWY8 451 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 PYURFQ96I23 114 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 FAM46AQ96IP4 442 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 NSMCE2Q96MF7 247 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 TNFRSF13CQ96RJ3 184 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 FOXB1Q99853 325 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 DHRS9Q9BPW9 319 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 GSX2Q9BZM3 304 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 GORASP2Q9H8Y8 452 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 ZNF701Q9NV72 531 aaPredicted RBP12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 ZNF224Q9NZL3 707 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 MAGEL2Q9UJ55 1249 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 GDF2Q9UK05 429 aaPredicted RBP12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 HIF3AQ9Y2N7 669 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 ARID1AO14497 2285 aa12.91□□□□□ -0.34
RABGGTA-211ENST00000559850 VPS13CQ709C8 3753 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 TRBV4-1A0A0J9YWV2 114 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 TRIM64A6NGJ6 449 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 TRIM64BA6NI03 449 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 OVOL3O00110 214 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 ARHGEF9O43307 516 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 PDE5AO76074 875 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 IGHG1P01857 330 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 SEMG1P04279 462 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 CBR1P16152 277 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 ACADSP16219 412 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 ATP6V1B2P21281 511 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 TTKP33981 857 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 NAAAQ02083 359 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 FMODQ06828 376 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 FHL1Q13642 323 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 SEC23BQ15437 767 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 ARMC4Q5T2S8 1044 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 SHEQ5VZ18 495 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 VHLLQ6RSH7 139 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 SKA3Q8IX90 412 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 CIARTQ8N365 385 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 CLDN22Q8N7P3 220 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 LRRC75AQ8NAA5 344 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 NOXO1Q8NFA2 376 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 SLC7A13Q8TCU3 470 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 HDAC2Q92769 488 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 MCHR2Q969V1 340 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 MS4A3Q96HJ5 214 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 SMR3AQ99954 134 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 SH3GL3Q99963 347 aa12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 GSX1Q9H4S2 264 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 CRNNQ9UBG3 495 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 FAM32AQ9Y421 112 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 ZNF469Q96JG9 3925 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-211ENST00000559850 PLCE1Q9P212 2302 aa12.89□□□□□ -0.35
RABGGTA-211ENST00000559850 FLNAP21333 2647 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-211ENST00000559850 IGKV1D-43A0A0B4J1Z2 117 aa12.89□□□□□ -0.35
RABGGTA-211ENST00000559850 DHHO43323 396 aa12.89□□□□□ -0.35
RABGGTA-211ENST00000559850 SLC2A10O95528 541 aa12.89□□□□□ -0.35
RABGGTA-211ENST00000559850 IGKV3-15P01624 115 aa12.89□□□□□ -0.35
RABGGTA-211ENST00000559850 IGLV1-44P01699 117 aa12.89□□□□□ -0.35
RABGGTA-211ENST00000559850 HOXB1P14653 301 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-211ENST00000559850 ZNF26P17031 533 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-211ENST00000559850 DAP3P51398 398 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms