RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 FANK1Q8TC84 345 aa7.87□□□□□ -1.15
SPG11-207ENST00000558138 SLC7A13Q8TCU3 470 aa7.87□□□□□ -1.15
SPG11-207ENST00000558138 TMEM171Q8WVE6 324 aa7.87□□□□□ -1.15
SPG11-207ENST00000558138 ASB10Q8WXI3 467 aa7.87□□□□□ -1.15
SPG11-207ENST00000558138 NSMAFQ92636 917 aa7.87□□□□□ -1.15
SPG11-207ENST00000558138 NINJ1Q92982 152 aa7.87□□□□□ -1.15
SPG11-207ENST00000558138 FBXW5Q969U6 566 aa7.87□□□□□ -1.15
SPG11-207ENST00000558138 GTPBP3Q969Y2 492 aaKnown RBP7.87□□□□□ -1.15
SPG11-207ENST00000558138 C7orf34Q96L11 122 aa7.87□□□□□ -1.15
SPG11-207ENST00000558138 LRR1Q96L50 414 aa7.87□□□□□ -1.15
SPG11-207ENST00000558138 TNFRSF13CQ96RJ3 184 aa7.87□□□□□ -1.15
SPG11-207ENST00000558138 KCNN2Q9H2S1 579 aa7.87□□□□□ -1.15
SPG11-207ENST00000558138 TXNIPQ9H3M7 391 aa7.87□□□□□ -1.15
SPG11-207ENST00000558138 MAGIXQ9H6Y5 334 aa7.87□□□□□ -1.15
SPG11-207ENST00000558138 YY1AP1Q9H869 796 aa7.87□□□□□ -1.15
SPG11-207ENST00000558138 REEP1Q9H902 201 aa7.87□□□□□ -1.15
SPG11-207ENST00000558138 RNF121Q9H920 327 aa7.87□□□□□ -1.15
SPG11-207ENST00000558138 MOV10Q9HCE1 1003 aaKnown RBP7.87□□□□□ -1.15
SPG11-207ENST00000558138 FAIMQ9NVQ4 179 aa7.87□□□□□ -1.15
SPG11-207ENST00000558138 NPAP1Q9NZP6 1156 aa7.87□□□□□ -1.15
SPG11-207ENST00000558138 GRHPRQ9UBQ7 328 aa7.87□□□□□ -1.15
SPG11-207ENST00000558138 HIF3AQ9Y2N7 669 aa7.87□□□□□ -1.15
SPG11-207ENST00000558138 A0A1W2PPL8 197 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 DHRS12A0PJE2 317 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 DPRXA6NFQ7 191 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 A6NIZ1 184 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 RPL36A-HNRNPH2H7BZ11 118 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 ARHGEF9O43307 516 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 DHHO43323 396 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 SMPD2O60906 423 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 TRMUO75648 421 aaKnown RBP7.86□□□□□ -1.15
SPG11-207ENST00000558138 KRT36O76013 467 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 PRSS23O95084 383 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 NDUFB2O95178 105 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 CST1P01037 141 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 SEMG1P04279 462 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 PGA4P0DJD7 388 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 PGA3P0DJD8 388 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 RAP2AP10114 183 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 FUT4P22083 530 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 PAX7P23759 505 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 CD40P25942 277 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 NOS3P29474 1203 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 PTDSS1P48651 473 aaKnown RBP7.86□□□□□ -1.15
SPG11-207ENST00000558138 CENPAP49450 140 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 IDH3GP51553 393 aaPredicted RBP7.86□□□□□ -1.15
SPG11-207ENST00000558138 RPS6KA3P51812 740 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 RAP1BP61224 184 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 RPL27P61353 136 aaKnown RBP7.86□□□□□ -1.15
SPG11-207ENST00000558138 RAP1AP62834 184 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 ERVK-25P63136 954 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 MS4A2Q01362 244 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 PIGFQ07326 219 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 SPOCK1Q08629 439 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 GSG1Q2KHT4 349 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 ANKDD1AQ495B1 522 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 FAM205BPQ63HN1 556 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 JAZF1Q86VZ6 243 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 WDR31Q8NA23 367 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 OR52L1Q8NGH7 329 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 GNPDA2Q8TDQ7 276 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 LIPHQ8WWY8 451 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 BCL2L2Q92843 193 aaPredicted RBP7.86□□□□□ -1.15
SPG11-207ENST00000558138 TMEM54Q969K7 222 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 PIGTQ969N2 578 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 ZNF570Q96NI8 536 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 SLC38A2Q96QD8 506 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 RBP7Q96R05 134 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 KATNB1Q9BVA0 655 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 RERGLQ9H628 205 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 DENND2DQ9H6A0 471 aaPredicted RBP7.86□□□□□ -1.15
SPG11-207ENST00000558138 PLEKHF2Q9H8W4 249 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 SEC61A2Q9H9S3 476 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 IL20RAQ9UHF4 553 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 ZNF346Q9UL40 294 aaKnown RBP7.86□□□□□ -1.15
SPG11-207ENST00000558138 LAMP3Q9UQV4 416 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 SAMHD1Q9Y3Z3 626 aaKnown RBP7.86□□□□□ -1.15
SPG11-207ENST00000558138 U3KQV3 271 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 NOTCH2Q04721 2471 aa7.86□□□□□ -1.15
SPG11-207ENST00000558138 ABCA12Q86UK0 2595 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 ARPC4-TTLL3A0A0A6YYG9 625 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 A0A1W2PPR1 153 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 TCRBV5S2A0A599 114 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 SH3PXD2BA1X283 911 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 AQP12BA6NM10 295 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 H7C1C5 153 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 SOCS2O14508 198 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 CDC42EP2O14613 210 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 E2F6O75461 281 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 UBL3O95164 117 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 ATE1O95260 518 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 SLC2A10O95528 541 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 HLA-HP01893 362 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 CRYAAP02489 173 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 OR8G3PP0DMU2 310 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 HOXB1P14653 301 aaPredicted RBP7.85□□□□□ -1.15
SPG11-207ENST00000558138 FABP6P51161 128 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 LCN6P62502 163 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 PPP1R8Q12972 351 aaKnown RBP7.85□□□□□ -1.15
SPG11-207ENST00000558138 BNIP1Q12981 228 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms