RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 ELK4P28324 431 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 SHC1P29353 583 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 CASQ1P31415 396 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 IL2RGP31785 369 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 SPRP35270 261 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-228ENST00000554592 ARL3P36405 182 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 GP5P40197 560 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 RFX3P48380 749 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 CCNG1P51959 295 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 GNG11P61952 73 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 SPOCK1Q08629 439 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 RASGEF1BQ0VAM2 473 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 ZNF155Q12901 538 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-228ENST00000554592 DLG1Q12959 904 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 PDIA2Q13087 525 aaKnown RBP4.19□□□□□ -1.74
ATXN3-228ENST00000554592 HEPACAMQ14CZ8 416 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 MED22Q15528 200 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 GSTA3Q16772 222 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 FAM83EQ2M2I3 478 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 PLPPR5Q32ZL2 321 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 C10orf25Q5T742 122 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 GRTP1Q5TC63 336 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 SHQ1Q6PI26 577 aaKnown RBP4.19□□□□□ -1.74
ATXN3-228ENST00000554592 SYT10Q6XYQ8 523 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 CCDC91Q7Z6B0 441 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 TBC1D26Q86UD7 250 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 ANKRD13BQ86YJ7 626 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 MISPQ8IVT2 679 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 FAM9CQ8IZT9 166 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 UBE2J2Q8N2K1 259 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 MMGT1Q8N4V1 131 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 TMEM116Q8NCL8 245 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 OR4C3Q8NH37 302 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 B4GALNT2Q8NHY0 566 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 SELENOMQ8WWX9 145 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 ZNF75CPQ92670 426 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-228ENST00000554592 MRPL24Q96A35 216 aaKnown RBP4.19□□□□□ -1.74
ATXN3-228ENST00000554592 EXOSC8Q96B26 276 aaKnown RBP4.19□□□□□ -1.74
ATXN3-228ENST00000554592 COQ8BQ96D53 544 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 BBS4Q96RK4 519 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 RBBP8Q99708 897 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 NAPGQ99747 312 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-228ENST00000554592 PSD2Q9BQI7 771 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 LMF2Q9BU23 707 aaKnown RBP4.19□□□□□ -1.74
ATXN3-228ENST00000554592 C1QTNF6Q9BXI9 259 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 SHCBP1LQ9BZQ2 653 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 LZTFL1Q9NQ48 299 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 GRIP1Q9Y3R0 1128 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 HEATR5AQ86XA9 2040 aa4.19□□□□□ -1.74
ATXN3-228ENST00000554592 A0A096LPK6 155 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 A0A1W2PR80 420 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 LIPT2A6NK58 231 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 NPIPB11E5RHQ5 1161 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 E7ESA3 106 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 PGRMC1O00264 195 aaKnown RBP4.18□□□□□ -1.74
ATXN3-228ENST00000554592 UPK1AO00322 258 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 ERLIN1O75477 346 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 RAD51DO75771 328 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 PSMG1O95456 288 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 OXSR1O95747 527 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-228ENST00000554592 PDYNP01213 254 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 IGKV1D-16P01601 117 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 TFP02787 698 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 ERCC1P07992 297 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-228ENST00000554592 IL3P08700 152 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 HPGDP15428 266 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 PGCP20142 388 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 EDNRAP25101 427 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 LCN1P31025 176 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 GPR12P47775 334 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 KHKP50053 298 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 IDH3GP51553 393 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-228ENST00000554592 NCBP2P52298 156 aaKnown RBP eCLIP4.18□□□□□ -1.745e-7■■■■□ 25.1
ATXN3-228ENST00000554592 CKAP4Q07065 602 aaKnown RBP4.18□□□□□ -1.74
ATXN3-228ENST00000554592 PDK3Q15120 406 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 EFNB3Q15768 340 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 GABRA6Q16445 453 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 WHAMMP3Q1A5X7 153 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 VPS26BQ4G0F5 336 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 GGTA1PQ4G0N0 100 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 KLHL24Q6TFL4 600 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 IKBIPQ70UQ0 350 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 ZNF771Q7L3S4 317 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-228ENST00000554592 ZBED8Q8IZ13 594 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 OR2L13Q8N349 312 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 ZNF786Q8N393 782 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 SVOPLQ8N434 492 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 C1orf52Q8N6N3 182 aaKnown RBP4.18□□□□□ -1.74
ATXN3-228ENST00000554592 WDR31Q8NA23 367 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 ATP6V1C2Q8NEY4 427 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 PRSS3P2Q8NHM4 247 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 ACTRT1Q8TDG2 376 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 GPR151Q8TDV0 419 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 ZFP90Q8TF47 636 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 PYROXD1Q8WU10 500 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 TMEM186Q96B77 213 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 APH1AQ96BI3 265 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 SH3YL1Q96HL8 342 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-228ENST00000554592 WDFY2Q96P53 400 aa4.18□□□□□ -1.74
ATXN3-228ENST00000554592 SUCNR1Q9BXA5 334 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms