RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 EIF2S3P41091 472 aaKnown RBP12.09□□□□□ -0.47
TCOF1-213ENST00000514442 OR2F1Q13607 317 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 TRIM61Q5EBN2 209 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 ZNF611Q8N823 705 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 NUDT22Q9BRQ3 303 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 DOCK5Q9H7D0 1870 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 TMEM82A0PJX8 343 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 HSD11B2P80365 405 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 GSG1Q2KHT4 349 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 SLC16A11Q8NCK7 471 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 OR11H7Q8NGC8 314 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 ELP5Q8TE02 316 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 NEURL3Q96EH8 262 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 CYSLTR2Q9NS75 346 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 TTC3P53804 2025 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 TAF1LQ8IZX4 1826 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 WNK3Q9BYP7 1800 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 GABARAPH6UMI1 98 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 GAPDHSO14556 408 aaPredicted RBP12.09□□□□□ -0.47
TCOF1-213ENST00000514442 HLA-AP01891 365 aaKnown RBP12.09□□□□□ -0.47
TCOF1-213ENST00000514442 PPT1P50897 306 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 NDUFA6P56556 154 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 HYAL4Q2M3T9 481 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 WBP2NLQ6ICG8 309 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 C1QTNF6Q9BXI9 259 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 NRIP3Q9NQ35 241 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 SLC6A13Q9NSD5 602 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 PARPBPQ9NWS1 579 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 TCRBV16S1A1N1A0A5B0 115 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 C2CD4DB7Z1M9 353 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 RBMXP38159 391 aaKnown RBP12.09□□□□□ -0.47
TCOF1-213ENST00000514442 B4GALNT1Q00973 533 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 PDE7AQ13946 482 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 FAM189A2Q15884 450 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 ETFDHQ16134 617 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 PRAMEF20Q5VT98 475 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 FAM109BQ6ICB4 259 aaPredicted RBP12.09□□□□□ -0.47
TCOF1-213ENST00000514442 TRMT61AQ96FX7 289 aaKnown RBP12.09□□□□□ -0.47
TCOF1-213ENST00000514442 RNF170Q96K19 258 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 CCDC86Q9H6F5 360 aaKnown RBP12.09□□□□□ -0.47
TCOF1-213ENST00000514442 FBXL4Q9UKA2 621 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 ICKQ9UPZ9 632 aa12.09□□□□□ -0.47
TCOF1-213ENST00000514442 NSG1A0A0A6YYJ2 146 aa12.08□□□□□ -0.47
TCOF1-213ENST00000514442 G3V3Y1 287 aa12.08□□□□□ -0.47
TCOF1-213ENST00000514442 PRICKLE3O43900 615 aaPredicted RBP12.08□□□□□ -0.47
TCOF1-213ENST00000514442 FGF9P31371 208 aaPredicted RBP12.08□□□□□ -0.47
TCOF1-213ENST00000514442 OPRD1P41143 372 aa12.08□□□□□ -0.47
TCOF1-213ENST00000514442 LIM2P55344 173 aa12.08□□□□□ -0.47
TCOF1-213ENST00000514442 TAS2R19P59542 299 aa12.08□□□□□ -0.47
TCOF1-213ENST00000514442 IRF3Q14653 427 aa12.08□□□□□ -0.47
TCOF1-213ENST00000514442 FAM74A1Q5RGS3 127 aa12.08□□□□□ -0.47
TCOF1-213ENST00000514442 SLC22A11Q9NSA0 550 aa12.08□□□□□ -0.47
TCOF1-213ENST00000514442 FAM86C1Q9NVL1 165 aa12.08□□□□□ -0.47
TCOF1-213ENST00000514442 A0A0B4J2A0 478 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 TRBV5-4A0A0C4DH59 114 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 PHYHO14832 338 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 YBX1P67809 324 aaKnown RBP12.08□□□□□ -0.48
TCOF1-213ENST00000514442 TMPPEQ6ZT21 453 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 GHSRQ92847 366 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 MS4A6EQ96DS6 147 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 FAM71F1Q96KD3 344 aaPredicted RBP12.08□□□□□ -0.48
TCOF1-213ENST00000514442 KLHL15Q96M94 604 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 SHPKQ9UHJ6 478 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 SLC7A11Q9UPY5 501 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 ZNF736B4DX44 427 aaPredicted RBP12.08□□□□□ -0.48
TCOF1-213ENST00000514442 H7C1C5 153 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 HOXC8P31273 242 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 PRKAR1BP31321 381 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 GLP1RP43220 463 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 LCN6P62502 163 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 ZNF385BQ569K4 471 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 AGBL4Q5VU57 503 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 RCBTB1Q8NDN9 531 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 OR10R2Q8NGX6 335 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 LMF2Q9BU23 707 aaKnown RBP12.08□□□□□ -0.48
TCOF1-213ENST00000514442 RPP25Q9BUL9 199 aaKnown RBP12.08□□□□□ -0.48
TCOF1-213ENST00000514442 NRSN2Q9GZP1 204 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 ASH2LQ9UBL3 628 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 SMCO3A2RU48 225 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 CDHR4A6H8M9 788 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 ZNF705GA8MUZ8 300 aaPredicted RBP12.08□□□□□ -0.48
TCOF1-213ENST00000514442 F5H5K5 113 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 SLC16A7O60669 478 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 ZFAND5O76080 213 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 PMS2P2O95744 297 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 CNR1P21554 472 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 MMP15P51511 669 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 NKPD1Q17RQ9 610 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 SLC6A19Q695T7 634 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 IL17RCQ8NAC3 791 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 AGBL5Q8NDL9 886 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 FAM174AQ8TBP5 190 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 OR52A5Q9H2C5 316 aa12.08□□□□□ -0.48
TCOF1-213ENST00000514442 FGF20Q9NP95 211 aaPredicted RBP12.08□□□□□ -0.48
TCOF1-213ENST00000514442 TESQ9UGI8 421 aaKnown RBP12.08□□□□□ -0.48
TCOF1-213ENST00000514442 TLCD2A6NGC4 264 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 HOXD4P09016 255 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-213ENST00000514442 TUBG1P23258 451 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 GDF1P27539 372 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 IL13RA1P78552 427 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms