RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 OR1J4Q8NGS1 313 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 FNDC8Q8TC99 324 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 MIB2Q96AX9 1013 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 C4orf36Q96KX1 117 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 PGLYRP3Q96LB9 341 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 KLHL15Q96M94 604 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 KCNK17Q96T54 332 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 TBX5Q99593 518 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 SH3GL3Q99963 347 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 NUAK2Q9H093 628 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 WDR76Q9H967 626 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 RALYQ9UKM9 306 aaKnown RBP7.52□□□□□ -1.21
RNF4-220ENST00000513578 SIRT4Q9Y6E7 314 aaPredicted RBP7.52□□□□□ -1.21
RNF4-220ENST00000513578 FREM3P0C091 2139 aa7.52□□□□□ -1.21
RNF4-220ENST00000513578 NCKAP5O14513 1909 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 LOC101059948A0A1B0GTJ6 334 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 ANKRD61A6NGH8 418 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 CDRT15L2A8MXV6 281 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 E9PI62 339 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 C11orf98E9PRG8 122 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 J3QLW9 94 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 DCTN6O00399 190 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 ZIC3O60481 467 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 SELENOFO60613 162 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 TMEM127O75204 238 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 GATBO75879 557 aaKnown RBP7.51□□□□□ -1.21
RNF4-220ENST00000513578 CDRT1O95170 752 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 P04436 131 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 TFPIP10646 304 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 ZNF12P17014 697 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 ZNF19P17023 458 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 ALOX5APP20292 161 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 IL11P20809 199 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 AHCYP23526 432 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 DPP4P27487 766 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 SRD5A2P31213 254 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 PYCR1P32322 319 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 NAA10P41227 235 aaPredicted RBP7.51□□□□□ -1.21
RNF4-220ENST00000513578 CLDN6P56747 220 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 SOX8P57073 446 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 SIRPAP78324 504 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 SLC35A1P78382 337 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 HSF1Q00613 529 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 TLE3Q04726 772 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 RUNX1T1Q06455 604 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 MYBPHQ13203 477 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 CDK5R1Q15078 307 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 INPP5JQ15735 1006 aaPredicted RBP7.51□□□□□ -1.21
RNF4-220ENST00000513578 INAQ16352 499 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 PCK2Q16822 640 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 C22orf42Q6IC83 251 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 FDX2Q6P4F2 183 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 UNQ9370/PRO34162Q6UXP9 181 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 TMPPEQ6ZT21 453 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 ASB18Q6ZVZ8 466 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 SLC35D2Q76EJ3 337 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 CCDC190Q86UF4 302 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 TPRA1Q86W33 373 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 MARCH9Q86YJ5 346 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 PM20D2Q8IYS1 436 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 ZFP41Q8N8Y5 198 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 ZNF454Q8N9F8 522 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 OR51L1Q8NGJ5 315 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 OR6K6Q8NGW6 343 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 ABHD4Q8TB40 342 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 SNX33Q8WV41 574 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 KCNE4Q8WWG9 221 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 ASB17Q8WXJ9 295 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 AP3S1Q92572 193 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 NKD1Q969G9 470 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 TMEM203Q969S6 136 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 SMIM19Q96E16 107 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 PELI1Q96FA3 418 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 OXGR1Q96P68 337 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 INTS14Q96SY0 518 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 TM9SF2Q99805 663 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 BARHL1Q9BZE3 327 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 SYT4Q9H2B2 425 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 SRA1Q9HD15 236 aaKnown RBP7.51□□□□□ -1.21
RNF4-220ENST00000513578 GALNT8Q9NY28 637 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 B3GAT1Q9P2W7 334 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 PLEKHB1Q9UF11 243 aaPredicted RBP7.51□□□□□ -1.21
RNF4-220ENST00000513578 TEKT2Q9UIF3 430 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 COPS3Q9UNS2 423 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 UGT2A1Q9Y4X1 527 aa7.51□□□□□ -1.21
RNF4-220ENST00000513578 TRAV1-2A0A0B4J238 106 aa7.5□□□□□ -1.21
RNF4-220ENST00000513578 AQP7P3A6NL99 342 aa7.5□□□□□ -1.21
RNF4-220ENST00000513578 GJE1A6NN92 205 aa7.5□□□□□ -1.21
RNF4-220ENST00000513578 PROB1E7EW31 1015 aa7.5□□□□□ -1.21
RNF4-220ENST00000513578 NPIPA5E9PKD4 350 aa7.5□□□□□ -1.21
RNF4-220ENST00000513578 LINC01387J3KSC0 135 aa7.5□□□□□ -1.21
RNF4-220ENST00000513578 EIF1BO60739 113 aaKnown RBP7.5□□□□□ -1.21
RNF4-220ENST00000513578 KHDRBS3O75525 346 aaKnown RBP7.5□□□□□ -1.21
RNF4-220ENST00000513578 VAMP5O95183 116 aa7.5□□□□□ -1.21
RNF4-220ENST00000513578 ABHD16AO95870 558 aa7.5□□□□□ -1.21
RNF4-220ENST00000513578 HRGP04196 525 aa7.5□□□□□ -1.21
RNF4-220ENST00000513578 FTH1P19P0C7X4 201 aa7.5□□□□□ -1.21
RNF4-220ENST00000513578 CNR1P21554 472 aa7.5□□□□□ -1.21
RNF4-220ENST00000513578 SDC2P34741 201 aa7.5□□□□□ -1.21
RNF4-220ENST00000513578 CYB561P49447 251 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms