RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 JMJD6Q6NYC1 403 aaPredicted RBP4.8□□□□□ -1.64
GGPS1-208ENST00000497327 TMEM65Q6PI78 240 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 OPN5Q6U736 354 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 ZNF730Q6ZMV8 503 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 MEX3DQ86XN8 651 aaKnown RBP4.8□□□□□ -1.64
GGPS1-208ENST00000497327 RAB43Q86YS6 212 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 ENTHD1Q8IYW4 607 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 DND1Q8IYX4 353 aaKnown RBP4.8□□□□□ -1.64
GGPS1-208ENST00000497327 C8orf59Q8N0T1 100 aaPredicted RBP4.8□□□□□ -1.64
GGPS1-208ENST00000497327 SPARTQ8N0X7 666 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 CADM2Q8N3J6 435 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 CLDN22Q8N7P3 220 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 WDSUB1Q8N9V3 476 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 ZNF555Q8NEP9 628 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 OR8D4Q8NGM9 314 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 PFN4Q8NHR9 129 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 RHOXF1Q8NHV9 184 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 B4GALNT2Q8NHY0 566 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 PIGXQ8TBF5 258 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 GPR119Q8TDV5 335 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 PAQR8Q8TEZ7 354 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 DUSP19Q8WTR2 217 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 APH1BQ8WW43 257 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 LIPHQ8WWY8 451 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 IP6K3Q96PC2 410 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 TMEM43Q9BTV4 400 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 ANGPTL4Q9BY76 406 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 TBL1XR1Q9BZK7 514 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 PLA2G12AQ9BZM1 189 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 SLC19A3Q9BZV2 496 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 DSN1Q9H410 356 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 CDCP1Q9H5V8 836 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 ZNF556Q9HAH1 456 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 SLC25A19Q9HC21 320 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 IL20Q9NYY1 176 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 CNIH4Q9P003 139 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 KIF17Q9P2E2 1029 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 ENOPH1Q9UHY7 261 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 RNF6Q9Y252 685 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 SIGLEC7Q9Y286 467 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 MED31Q9Y3C7 131 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 PCDHGB6Q9Y5F9 930 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 GMPPBQ9Y5P6 360 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 SPEGQ15772 3267 aa4.8□□□□□ -1.64
GGPS1-208ENST00000497327 MYO15AQ9UKN7 3530 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 DMDP11532 3685 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 TP53I11O14683 189 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 SCO2O43819 266 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 TNFAIP8O95379 198 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 TSPAN19P0C672 248 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 CCL3P10147 92 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 PNMTP11086 282 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 IFI30P13284 250 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 PGCP20142 388 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 CRHBPP24387 322 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 ELK4P28324 431 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 TACR3P29371 465 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 GPR4P46093 362 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 SSR4P51571 173 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 NUP107P57740 925 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 NANOS2P60321 138 aaKnown RBP4.79□□□□□ -1.64
GGPS1-208ENST00000497327 CXCR4P61073 352 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 COPZ1P61923 177 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 SNRPGP62308 76 aaKnown RBP4.79□□□□□ -1.64
GGPS1-208ENST00000497327 IL1RL1Q01638 556 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 EGR4Q05215 589 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 LTBQ06643 244 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 AIMP2Q13155 320 aaKnown RBP4.79□□□□□ -1.64
GGPS1-208ENST00000497327 SRSF6Q13247 344 aaKnown RBP4.79□□□□□ -1.64
GGPS1-208ENST00000497327 RAB32Q13637 225 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 GINS1Q14691 196 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 QPRTQ15274 297 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 INPP5JQ15735 1006 aaPredicted RBP4.79□□□□□ -1.64
GGPS1-208ENST00000497327 COL28A1Q2UY09 1125 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 SLC25A30Q5SVS4 291 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 TMEM236Q5W0B7 351 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 KRT80Q6KB66 452 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 ACSM5Q6NUN0 579 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 SLC30A6Q6NXT4 461 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 TTC33Q6PID6 262 aaPredicted RBP4.79□□□□□ -1.64
GGPS1-208ENST00000497327 ISLR2Q6UXK2 745 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 ZNF620Q6ZNG0 422 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 C9orf47Q6ZRZ4 202 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 RRM2BQ7LG56 351 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 SLC46A3Q7Z3Q1 461 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 KCTD20Q7Z5Y7 419 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 GPALPP1Q8IXQ4 340 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 FADS6Q8N9I5 356 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 SETD9Q8NE22 299 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 OR2M3Q8NG83 312 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 OR4Q3Q8NH05 313 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 CNIH3Q8TBE1 160 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 HDAC2Q92769 488 aaKnown RBP4.79□□□□□ -1.64
GGPS1-208ENST00000497327 ZNF566Q969W8 418 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 BPIFA2Q96DR5 249 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 SH3YL1Q96HL8 342 aaPredicted RBP4.79□□□□□ -1.64
GGPS1-208ENST00000497327 SGCZQ96LD1 299 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 NPAS1Q99742 590 aa4.79□□□□□ -1.64
GGPS1-208ENST00000497327 APOL4Q9BPW4 351 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms