RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 IL17RDQ8NFM7 739 aa27.18■■□□□ 1.94
LDB1-204ENST00000490751 SGTBQ96EQ0 304 aa27.18■■□□□ 1.94
LDB1-204ENST00000490751 SLC25A44Q96H78 314 aaPredicted RBP27.18■■□□□ 1.94
LDB1-204ENST00000490751 SORCS2Q96PQ0 1159 aa27.18■■□□□ 1.94
LDB1-204ENST00000490751 C20orf141Q9NUB4 165 aa27.18■■□□□ 1.94
LDB1-204ENST00000490751 ZNF224Q9NZL3 707 aa27.18■■□□□ 1.94
LDB1-204ENST00000490751 BCL10O95999 233 aa27.17■■□□□ 1.94
LDB1-204ENST00000490751 TP53P04637 393 aaPredicted RBP27.17■■□□□ 1.94
LDB1-204ENST00000490751 THRBP10828 461 aa27.17■■□□□ 1.94
LDB1-204ENST00000490751 FUT1P19526 365 aa27.17■■□□□ 1.94
LDB1-204ENST00000490751 SELENOWP63302 87 aa27.17■■□□□ 1.94
LDB1-204ENST00000490751 RPL18Q07020 188 aaKnown RBP27.17■■□□□ 1.94
LDB1-204ENST00000490751 EFNB3Q15768 340 aa27.17■■□□□ 1.94
LDB1-204ENST00000490751 FAM168AQ92567 244 aa27.17■■□□□ 1.94
LDB1-204ENST00000490751 MS4A3Q96HJ5 214 aa27.17■■□□□ 1.94
LDB1-204ENST00000490751 ZNF442Q9H7R0 627 aa27.17■■□□□ 1.94
LDB1-204ENST00000490751 A0A096LNT2 108 aa27.16■■□□□ 1.94
LDB1-204ENST00000490751 F12P00748 615 aaPredicted RBP27.16■■□□□ 1.94
LDB1-204ENST00000490751 IGF2P01344 180 aa27.16■■□□□ 1.94
LDB1-204ENST00000490751 THBS4P35443 961 aa27.16■■□□□ 1.94
LDB1-204ENST00000490751 LIPEQ05469 1076 aa27.16■■□□□ 1.94
LDB1-204ENST00000490751 TREML1Q86YW5 311 aa27.16■■□□□ 1.94
LDB1-204ENST00000490751 MED31Q9Y3C7 131 aa27.16■■□□□ 1.94
LDB1-204ENST00000490751 FKBP7Q9Y680 259 aa27.16■■□□□ 1.94
LDB1-204ENST00000490751 ABCA1O95477 2261 aa27.16■■□□□ 1.94
LDB1-204ENST00000490751 F13BP05160 661 aa27.15■■□□□ 1.94
LDB1-204ENST00000490751 CSF3P09919 207 aa27.15■■□□□ 1.94
LDB1-204ENST00000490751 PGA4P0DJD7 388 aa27.15■■□□□ 1.94
LDB1-204ENST00000490751 PGA3P0DJD8 388 aa27.15■■□□□ 1.94
LDB1-204ENST00000490751 PTDSS1P48651 473 aaKnown RBP27.15■■□□□ 1.94
LDB1-204ENST00000490751 SLC7A2P52569 658 aa27.15■■□□□ 1.94
LDB1-204ENST00000490751 LRFN4Q6PJG9 635 aa27.15■■□□□ 1.94
LDB1-204ENST00000490751 C10orf105Q8TEF2 133 aa27.15■■□□□ 1.94
LDB1-204ENST00000490751 LZICQ8WZA0 190 aa27.15■■□□□ 1.94
LDB1-204ENST00000490751 PRRC1Q96M27 445 aa27.15■■□□□ 1.94
LDB1-204ENST00000490751 ZNF75AQ96N20 296 aa27.15■■□□□ 1.94
LDB1-204ENST00000490751 VRK1Q99986 396 aaPredicted RBP27.15■■□□□ 1.94
LDB1-204ENST00000490751 PLK3Q9H4B4 646 aa27.15■■□□□ 1.94
LDB1-204ENST00000490751 A4GNTQ9UNA3 340 aa27.15■■□□□ 1.94
LDB1-204ENST00000490751 ANK3Q12955 4377 aaKnown RBP27.14■■□□□ 1.94
LDB1-204ENST00000490751 A0A1W2PRG6 482 aa27.14■■□□□ 1.94
LDB1-204ENST00000490751 NME4O00746 187 aa27.14■■□□□ 1.94
LDB1-204ENST00000490751 UBL3O95164 117 aa27.14■■□□□ 1.94
LDB1-204ENST00000490751 IGHG1P01857 330 aa27.14■■□□□ 1.94
LDB1-204ENST00000490751 SLC25A16P16260 332 aa27.14■■□□□ 1.94
LDB1-204ENST00000490751 ZNF14P17017 642 aaPredicted RBP27.14■■□□□ 1.94
LDB1-204ENST00000490751 NPR2P20594 1047 aa27.14■■□□□ 1.94
LDB1-204ENST00000490751 AQP2P41181 271 aa27.14■■□□□ 1.94
LDB1-204ENST00000490751 GIPRP48546 466 aa27.14■■□□□ 1.94
LDB1-204ENST00000490751 RAB1AP62820 205 aa27.14■■□□□ 1.94
LDB1-204ENST00000490751 SNTB2Q13425 540 aaKnown RBP27.14■■□□□ 1.94
LDB1-204ENST00000490751 DAG1Q14118 895 aa27.14■■□□□ 1.94
LDB1-204ENST00000490751 KRT80Q6KB66 452 aa27.14■■□□□ 1.94
LDB1-204ENST00000490751 PIWIL3Q7Z3Z3 882 aaKnown RBP27.14■■□□□ 1.94
LDB1-204ENST00000490751 SPATA21Q7Z572 469 aa27.14■■□□□ 1.94
LDB1-204ENST00000490751 ANKS4BQ8N8V4 417 aa27.14■■□□□ 1.94
LDB1-204ENST00000490751 HOPXQ9BPY8 73 aaPredicted RBP27.14■■□□□ 1.94
LDB1-204ENST00000490751 EFCAB1Q9HAE3 211 aa27.14■■□□□ 1.94
LDB1-204ENST00000490751 VSTM5A8MXK1 200 aa27.13■■□□□ 1.93
LDB1-204ENST00000490751 MCIDASD6RGH6 385 aa27.13■■□□□ 1.93
LDB1-204ENST00000490751 DHHO43323 396 aa27.13■■□□□ 1.93
LDB1-204ENST00000490751 ATP8B1O43520 1251 aa27.13■■□□□ 1.93
LDB1-204ENST00000490751 CD5LO43866 347 aa27.13■■□□□ 1.93
LDB1-204ENST00000490751 GPRIN2O60269 458 aa27.13■■□□□ 1.93
LDB1-204ENST00000490751 PIP5K1CO60331 668 aa27.13■■□□□ 1.93
LDB1-204ENST00000490751 RAB36O95755 333 aa27.13■■□□□ 1.93
LDB1-204ENST00000490751 ST3GAL3Q11203 375 aa27.13■■□□□ 1.93
LDB1-204ENST00000490751 C8orf82Q6P1X6 216 aaPredicted RBP27.13■■□□□ 1.93
LDB1-204ENST00000490751 VTCN1Q7Z7D3 282 aa27.13■■□□□ 1.93
LDB1-204ENST00000490751 SKA3Q8IX90 412 aa27.13■■□□□ 1.93
LDB1-204ENST00000490751 SLC22A24Q8N4F4 322 aa27.13■■□□□ 1.93
LDB1-204ENST00000490751 LIPHQ8WWY8 451 aa27.13■■□□□ 1.93
LDB1-204ENST00000490751 DENND2DQ9H6A0 471 aaPredicted RBP27.13■■□□□ 1.93
LDB1-204ENST00000490751 INIPQ9NRY2 104 aa27.13■■□□□ 1.93
LDB1-204ENST00000490751 TMEM38BQ9NVV0 291 aa27.13■■□□□ 1.93
LDB1-204ENST00000490751 hCG_2039718K7EN88 272 aa27.12■■□□□ 1.93
LDB1-204ENST00000490751 CXCR6O00574 342 aa27.12■■□□□ 1.93
LDB1-204ENST00000490751 QDPRP09417 244 aa27.12■■□□□ 1.93
LDB1-204ENST00000490751 IFNA8P32881 189 aa27.12■■□□□ 1.93
LDB1-204ENST00000490751 NUDT2P50583 147 aa27.12■■□□□ 1.93
LDB1-204ENST00000490751 CLRN1P58418 232 aa27.12■■□□□ 1.93
LDB1-204ENST00000490751 RUNX1T1Q06455 604 aa27.12■■□□□ 1.93
LDB1-204ENST00000490751 MOSPD2Q8NHP6 518 aa27.12■■□□□ 1.93
LDB1-204ENST00000490751 ELAC2Q9BQ52 826 aaKnown RBP27.12■■□□□ 1.93
LDB1-204ENST00000490751 GSTA4O15217 222 aa27.11■■□□□ 1.93
LDB1-204ENST00000490751 PATE4P0C8F1 98 aa27.11■■□□□ 1.93
LDB1-204ENST00000490751 YAP1P46937 504 aaKnown RBP27.11■■□□□ 1.93
LDB1-204ENST00000490751 GSK3BP49841 420 aa27.11■■□□□ 1.93
LDB1-204ENST00000490751 PPOXP50336 477 aa27.11■■□□□ 1.93
LDB1-204ENST00000490751 DAP3P51398 398 aaKnown RBP27.11■■□□□ 1.93
LDB1-204ENST00000490751 LOXL1Q08397 574 aaPredicted RBP27.11■■□□□ 1.93
LDB1-204ENST00000490751 HACD2Q6Y1H2 254 aa27.11■■□□□ 1.93
LDB1-204ENST00000490751 SVOPLQ8N434 492 aa27.11■■□□□ 1.93
LDB1-204ENST00000490751 NOXO1Q8NFA2 376 aa27.11■■□□□ 1.93
LDB1-204ENST00000490751 FGFBP3Q8TAT2 258 aa27.11■■□□□ 1.93
LDB1-204ENST00000490751 ASB10Q8WXI3 467 aa27.11■■□□□ 1.93
LDB1-204ENST00000490751 ZNF347Q96SE7 839 aa27.11■■□□□ 1.93
LDB1-204ENST00000490751 SNX13Q9Y5W8 968 aa27.11■■□□□ 1.93
LDB1-204ENST00000490751 ZNF682O95780 498 aa27.1■■□□□ 1.93
LDB1-204ENST00000490751 IFNW1P05000 195 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms