RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 C1orf220Q5T0J3 134 aa1.2□□□□□ -2.22
RBM39-234ENST00000487604 PRMT9Q6P2P2 845 aa1.2□□□□□ -2.22
RBM39-234ENST00000487604 ZNF664Q8N3J9 261 aa1.2□□□□□ -2.22
RBM39-234ENST00000487604 SGK3Q96BR1 496 aa1.2□□□□□ -2.22
RBM39-234ENST00000487604 C4orf36Q96KX1 117 aa1.2□□□□□ -2.22
RBM39-234ENST00000487604 FAM111AQ96PZ2 611 aa1.2□□□□□ -2.22
RBM39-234ENST00000487604 SYNDIG1Q9H7V2 258 aa1.2□□□□□ -2.22
RBM39-234ENST00000487604 UBE2ZQ9H832 354 aaPredicted RBP1.2□□□□□ -2.22
RBM39-234ENST00000487604 ISYNA1Q9NPH2 558 aa1.2□□□□□ -2.22
RBM39-234ENST00000487604 SAMHD1Q9Y3Z3 626 aaKnown RBP1.2□□□□□ -2.22
RBM39-234ENST00000487604 RNF103-CHMP3A0A140T963 221 aa1.19□□□□□ -2.22
RBM39-234ENST00000487604 F8WDY8 70 aa1.19□□□□□ -2.22
RBM39-234ENST00000487604 FOXE1O00358 373 aaPredicted RBP1.19□□□□□ -2.22
RBM39-234ENST00000487604 GCM2O75603 506 aaPredicted RBP1.19□□□□□ -2.22
RBM39-234ENST00000487604 UPK3AO75631 287 aa1.19□□□□□ -2.22
RBM39-234ENST00000487604 RHOBTB1O94844 696 aa1.19□□□□□ -2.22
RBM39-234ENST00000487604 CCND2P30279 289 aa1.19□□□□□ -2.22
RBM39-234ENST00000487604 GPR6P46095 362 aaPredicted RBP1.19□□□□□ -2.22
RBM39-234ENST00000487604 NPBWR2P48146 333 aa1.19□□□□□ -2.22
RBM39-234ENST00000487604 SAXO2Q658L1 398 aa1.19□□□□□ -2.22
RBM39-234ENST00000487604 CEMP1Q6PRD7 247 aaPredicted RBP1.19□□□□□ -2.22
RBM39-234ENST00000487604 UTS2BQ765I0 119 aa1.19□□□□□ -2.22
RBM39-234ENST00000487604 PLA2G4DQ86XP0 818 aa1.19□□□□□ -2.22
RBM39-234ENST00000487604 ZNF713Q8N859 430 aaPredicted RBP1.19□□□□□ -2.22
RBM39-234ENST00000487604 OR52H1Q8NGJ2 320 aa1.19□□□□□ -2.22
RBM39-234ENST00000487604 LINC01560Q8TB33 94 aa1.19□□□□□ -2.22
RBM39-234ENST00000487604 ABHD3Q8WU67 409 aa1.19□□□□□ -2.22
RBM39-234ENST00000487604 SDR42E1Q8WUS8 393 aa1.19□□□□□ -2.22
RBM39-234ENST00000487604 CAMK2N2Q96S95 79 aa1.19□□□□□ -2.22
RBM39-234ENST00000487604 ZSCAN5AQ9BUG6 496 aa1.19□□□□□ -2.22
RBM39-234ENST00000487604 HELZ2Q9BYK8 2649 aaKnown RBP1.19□□□□□ -2.22
RBM39-234ENST00000487604 HSD3B7Q9H2F3 369 aa1.19□□□□□ -2.22
RBM39-234ENST00000487604 DHCR7Q9UBM7 475 aaKnown RBP1.19□□□□□ -2.22
RBM39-234ENST00000487604 TMCO1Q9UM00 188 aa1.19□□□□□ -2.22
RBM39-234ENST00000487604 MSH6P52701 1360 aa1.19□□□□□ -2.22
RBM39-234ENST00000487604 A8MXQ7 604 aa1.18□□□□□ -2.22
RBM39-234ENST00000487604 CCER2I3L3R5 266 aa1.18□□□□□ -2.22
RBM39-234ENST00000487604 J3QKU1 62 aa1.18□□□□□ -2.22
RBM39-234ENST00000487604 APCSP02743 223 aa1.18□□□□□ -2.22
RBM39-234ENST00000487604 CDKN2BP42772 138 aa1.18□□□□□ -2.22
RBM39-234ENST00000487604 CXCL12P48061 93 aa1.18□□□□□ -2.22
RBM39-234ENST00000487604 HCP5Q6MZN7 132 aa1.18□□□□□ -2.22
RBM39-234ENST00000487604 ZFP1Q6P2D0 407 aa1.18□□□□□ -2.22
RBM39-234ENST00000487604 SASS6Q6UVJ0 657 aa1.18□□□□□ -2.22
RBM39-234ENST00000487604 ABHD13Q7L211 337 aa1.18□□□□□ -2.22
RBM39-234ENST00000487604 FAM133AQ8N9E0 248 aa1.18□□□□□ -2.22
RBM39-234ENST00000487604 ST20-AS1Q8NBB2 130 aa1.18□□□□□ -2.22
RBM39-234ENST00000487604 NOXO1Q8NFA2 376 aa1.18□□□□□ -2.22
RBM39-234ENST00000487604 OR5D13Q8NGL4 314 aa1.18□□□□□ -2.22
RBM39-234ENST00000487604 CIRBP-AS1Q8TBR5 109 aa1.18□□□□□ -2.22
RBM39-234ENST00000487604 TMEM237Q96Q45 408 aa1.18□□□□□ -2.22
RBM39-234ENST00000487604 KCNK16Q96T55 309 aa1.18□□□□□ -2.22
RBM39-234ENST00000487604 KLF6Q99612 283 aaPredicted RBP1.18□□□□□ -2.22
RBM39-234ENST00000487604 KLHL28Q9NXS3 571 aa1.18□□□□□ -2.22
RBM39-234ENST00000487604 CDH9Q9ULB4 789 aa1.18□□□□□ -2.22
RBM39-234ENST00000487604 NOL7Q9UMY1 257 aaKnown RBP1.18□□□□□ -2.22
RBM39-234ENST00000487604 ANKRD12Q6UB98 2062 aa1.18□□□□□ -2.22
RBM39-234ENST00000487604 SCGB2A1O75556 95 aa1.17□□□□□ -2.22
RBM39-234ENST00000487604 HLA-DQA1P01909 254 aa1.17□□□□□ -2.22
RBM39-234ENST00000487604 CD74P04233 296 aa1.17□□□□□ -2.22
RBM39-234ENST00000487604 HLA-DPB1P04440 258 aa1.17□□□□□ -2.22
RBM39-234ENST00000487604 QARSP47897 775 aaKnown RBP1.17□□□□□ -2.22
RBM39-234ENST00000487604 SUB1P53999 127 aaKnown RBP eCLIP1.17□□□□□ -2.22
RBM39-234ENST00000487604 IL1RL1Q01638 556 aa1.17□□□□□ -2.22
RBM39-234ENST00000487604 SCRN3Q0VDG4 424 aa1.17□□□□□ -2.22
RBM39-234ENST00000487604 OR5I1Q13606 314 aa1.17□□□□□ -2.22
RBM39-234ENST00000487604 SMUG1Q53HV7 270 aa1.17□□□□□ -2.22
RBM39-234ENST00000487604 PHYHD1Q5SRE7 291 aa1.17□□□□□ -2.22
RBM39-234ENST00000487604 DNAJC24Q6P3W2 148 aa1.17□□□□□ -2.22
RBM39-234ENST00000487604 BLOC1S2Q6QNY1 142 aa1.17□□□□□ -2.22
RBM39-234ENST00000487604 SYT14Q8NB59 555 aa1.17□□□□□ -2.22
RBM39-234ENST00000487604 TMEM104Q8NE00 496 aa1.17□□□□□ -2.22
RBM39-234ENST00000487604 C1orf64Q8NEQ6 169 aa1.17□□□□□ -2.22
RBM39-234ENST00000487604 OR4D5Q8NGN0 318 aa1.17□□□□□ -2.22
RBM39-234ENST00000487604 C15orf40Q8WUR7 153 aa1.17□□□□□ -2.22
RBM39-234ENST00000487604 OSTF1Q92882 214 aa1.17□□□□□ -2.22
RBM39-234ENST00000487604 ZNF681Q96N22 645 aa1.17□□□□□ -2.22
RBM39-234ENST00000487604 SECISBP2Q96T21 854 aaKnown RBP1.17□□□□□ -2.22
RBM39-234ENST00000487604 OSBPL10Q9BXB5 764 aa1.17□□□□□ -2.22
RBM39-234ENST00000487604 ANGPTL4Q9BY76 406 aa1.17□□□□□ -2.22
RBM39-234ENST00000487604 MRPL37Q9BZE1 423 aaKnown RBP1.17□□□□□ -2.22
RBM39-234ENST00000487604 MRPL47Q9HD33 250 aaKnown RBP1.17□□□□□ -2.22
RBM39-234ENST00000487604 MOSPD1Q9UJG1 213 aa1.17□□□□□ -2.22
RBM39-234ENST00000487604 PIN4Q9Y237 131 aaKnown RBP1.17□□□□□ -2.22
RBM39-234ENST00000487604 KNSTRNQ9Y448 316 aa1.17□□□□□ -2.22
RBM39-234ENST00000487604 MFHAS1Q9Y4C4 1052 aa1.17□□□□□ -2.22
RBM39-234ENST00000487604 AHDC1Q5TGY3 1603 aaPredicted RBP1.17□□□□□ -2.22
RBM39-234ENST00000487604 HMCN1Q96RW7 5635 aa1.17□□□□□ -2.22
RBM39-234ENST00000487604 ABCC9O60706 1549 aa1.16□□□□□ -2.22
RBM39-234ENST00000487604 A0A0U1RQV1 116 aa1.16□□□□□ -2.22
RBM39-234ENST00000487604 J3QRE1 110 aa1.16□□□□□ -2.22
RBM39-234ENST00000487604 UBXN8O00124 270 aa1.16□□□□□ -2.22
RBM39-234ENST00000487604 ATP5LO75964 103 aa1.16□□□□□ -2.22
RBM39-234ENST00000487604 YIF1AO95070 293 aa1.16□□□□□ -2.22
RBM39-234ENST00000487604 FABP3P05413 133 aa1.16□□□□□ -2.22
RBM39-234ENST00000487604 GNAO1P09471 354 aa1.16□□□□□ -2.22
RBM39-234ENST00000487604 TCN1P20061 433 aaPredicted RBP1.16□□□□□ -2.22
RBM39-234ENST00000487604 RABL6Q3YEC7 729 aaPredicted RBP1.16□□□□□ -2.22
RBM39-234ENST00000487604 TMEM41BQ5BJD5 291 aa1.16□□□□□ -2.22
RBM39-234ENST00000487604 SLC10A5Q5PT55 438 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms