RNA–Protein interactions for RNA: ENST00000482879.5

SDC1-206, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-206ENST00000482879 APH1AQ96BI3 265 aa10.84□□□□□ -0.67
SDC1-206ENST00000482879 STARD4Q96DR4 205 aa10.84□□□□□ -0.67
SDC1-206ENST00000482879 SLC25A44Q96H78 314 aaPredicted RBP10.84□□□□□ -0.67
SDC1-206ENST00000482879 TVP23BQ9NYZ1 205 aa10.84□□□□□ -0.67
SDC1-206ENST00000482879 KLHL21Q9UJP4 597 aa10.84□□□□□ -0.67
SDC1-206ENST00000482879 PROCRQ9UNN8 238 aa10.84□□□□□ -0.67
SDC1-206ENST00000482879 LOC100130705A0A1B0GUX0 176 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 RIIAD1A6NNX1 92 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 PYCARD-AS1I3L0S3 204 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 SLC16A6O15403 523 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 SMNDC1O75940 238 aaKnown RBP eCLIP10.83□□□□□ -0.68
SDC1-206ENST00000482879 SLC2A10O95528 541 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 IFNGP01579 166 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 EDNRAP25101 427 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 CDKN2AP42771 156 aaKnown RBP10.83□□□□□ -0.68
SDC1-206ENST00000482879 OR3A2P47893 321 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 CSNK1A1P48729 337 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 ADORA2A-AS1P86434 159 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.83□□□□□ -0.68
SDC1-206ENST00000482879 SNAPC1Q16533 368 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 C12orf73Q69YU5 71 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 MTFR2Q6P444 385 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 LEG1Q6P5S2 330 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 IZUMO2Q6UXV1 221 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 PTCHD4Q6ZW05 846 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 C20orf196Q8IYI0 205 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 TMEM123Q8N131 208 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 OR6N1Q8NGY5 312 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 CCDC120Q96HB5 630 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 PLEKHA8Q96JA3 519 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 HRASLS5Q96KN8 279 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 SLC38A2Q96QD8 506 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 MRPL13Q9BYD1 178 aaKnown RBP10.83□□□□□ -0.68
SDC1-206ENST00000482879 PRRG3Q9BZD7 231 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 SLCO5A1Q9H2Y9 848 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 PLSCR4Q9NRQ2 329 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 COQ3Q9NZJ6 369 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 ZNF629Q9UEG4 869 aaPredicted RBP10.83□□□□□ -0.68
SDC1-206ENST00000482879 ERRFI1Q9UJM3 462 aaPredicted RBP10.83□□□□□ -0.68
SDC1-206ENST00000482879 RNF6Q9Y252 685 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 GMPPBQ9Y5P6 360 aa10.83□□□□□ -0.68
SDC1-206ENST00000482879 CACNA1CQ13936 2221 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 PRSS37A4D1T9 235 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 OR6C65A6NJZ3 312 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 CENPBD1B2RD01 187 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 E9PQ18 207 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 H7C1C5 153 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 M0R3G1 203 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 DVL2O14641 736 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 SURF4O15260 269 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 UPK3AO75631 287 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 KRT33AO76009 404 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 RENP00797 406 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 CGAP01215 116 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 IGHV3-9P01782 118 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 PGA4P0DJD7 388 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 PGA3P0DJD8 388 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 BMP5P22003 454 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 GGT2P36268 569 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 CAPGP40121 348 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 CDC42P60953 191 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 LCN6P62502 163 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 ADARB1P78563 741 aaKnown RBP10.82□□□□□ -0.68
SDC1-206ENST00000482879 LGALS3BPQ08380 585 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 CD47Q08722 323 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 ZNF362Q5T0B9 420 aaPredicted RBP10.82□□□□□ -0.68
SDC1-206ENST00000482879 TSPO2Q5TGU0 170 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 TTC23Q5W5X9 447 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 TFAP2EQ6VUC0 442 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 ADCK1Q86TW2 530 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 LIX1LQ8IVB5 337 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 UBE2J2Q8N2K1 259 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 GPR137CQ8N3F9 429 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 ZNF610Q8N9Z0 462 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 POMGNT2Q8NAT1 580 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 CYB561A3Q8NBI2 242 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 NPEPL1Q8NDH3 523 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 SDR9C7Q8NEX9 313 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 NOXO1Q8NFA2 376 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 TMEM54Q969K7 222 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 LRR1Q96L50 414 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 RBP7Q96R05 134 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 KCNK17Q96T54 332 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 NMNAT3Q96T66 252 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 PITX2Q99697 317 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 ALG12Q9BV10 488 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 ADI1Q9BV57 179 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 OPN3Q9H1Y3 402 aaPredicted RBP10.82□□□□□ -0.68
SDC1-206ENST00000482879 PIGMQ9H3S5 423 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 B3GAT2Q9NPZ5 323 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 CMC2Q9NRP2 79 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 SLC7A10Q9NS82 523 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 GLTPQ9NZD2 209 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 UPB1Q9UBR1 384 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 PRSS50Q9UI38 385 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 NDRG4Q9ULP0 352 aaKnown RBP10.82□□□□□ -0.68
SDC1-206ENST00000482879 SLC5A6Q9Y289 635 aa10.82□□□□□ -0.68
SDC1-206ENST00000482879 SLC22A23A1A5C7 686 aa10.81□□□□□ -0.68
SDC1-206ENST00000482879 M0R129 80 aa10.81□□□□□ -0.68
SDC1-206ENST00000482879 AHCYL1O43865 530 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms